RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
GABPB1-212ENST00000615671 PPM1FP49593 454 aaPredicted RBP22.22■■□□□ 1.15
GABPB1-212ENST00000615671 PDZRN3Q9UPQ7 1066 aa22.22■■□□□ 1.15
GABPB1-212ENST00000615671 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
GABPB1-212ENST00000615671 PPP2R1AP30153 589 aa22.21■■□□□ 1.15
GABPB1-212ENST00000615671 SERPINC1P01008 464 aa22.21■■□□□ 1.15
GABPB1-212ENST00000615671 THEMISQ8N1K5 641 aaPredicted RBP22.21■■□□□ 1.15
GABPB1-212ENST00000615671 ACBD3Q9H3P7 528 aa22.21■■□□□ 1.15
GABPB1-212ENST00000615671 LRP2BPQ9P2M1 347 aa22.21■■□□□ 1.15
GABPB1-212ENST00000615671 HIP1O00291 1037 aa22.21■■□□□ 1.15
GABPB1-212ENST00000615671 ZNF396Q96N95 335 aaPredicted RBP22.21■■□□□ 1.15
GABPB1-212ENST00000615671 DEF6Q9H4E7 631 aa22.21■■□□□ 1.15
GABPB1-212ENST00000615671 FAM177A1Q8N128 213 aaPredicted RBP22.2■■□□□ 1.14
GABPB1-212ENST00000615671 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
GABPB1-212ENST00000615671 TTLL12Q14166 644 aaPredicted RBP22.2■■□□□ 1.14
GABPB1-212ENST00000615671 NBPF1Q3BBV0 1214 aa22.2■■□□□ 1.14
GABPB1-212ENST00000615671 NASPP49321 788 aaPredicted RBP22.2■■□□□ 1.14
GABPB1-212ENST00000615671 ABCF2Q9UG63 623 aa22.2■■□□□ 1.14
GABPB1-212ENST00000615671 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
GABPB1-212ENST00000615671 LRRCC1Q9C099 1032 aa22.19■■□□□ 1.14
GABPB1-212ENST00000615671 TRIM22Q8IYM9 498 aa22.19■■□□□ 1.14
GABPB1-212ENST00000615671 RSPH6AQ9H0K4 717 aa22.19■■□□□ 1.14
GABPB1-212ENST00000615671 PTCD1O75127 700 aaKnown RBP22.19■■□□□ 1.14
GABPB1-212ENST00000615671 IDH1O75874 414 aaKnown RBP22.19■■□□□ 1.14
GABPB1-212ENST00000615671 ME1P48163 572 aa22.18■■□□□ 1.14
GABPB1-212ENST00000615671 CCDC97Q96F63 343 aaPredicted RBP22.18■■□□□ 1.14
GABPB1-212ENST00000615671 CWC27Q6UX04 472 aaKnown RBP22.18■■□□□ 1.14
GABPB1-212ENST00000615671 MYO6Q9UM54 1294 aa22.18■■□□□ 1.14
GABPB1-212ENST00000615671 NEBLO76041 1014 aa22.17■■□□□ 1.14
GABPB1-212ENST00000615671 IL1RAPL2Q9NP60 686 aa22.17■■□□□ 1.14
GABPB1-212ENST00000615671 CYP46A1Q9Y6A2 500 aa22.17■■□□□ 1.14
GABPB1-212ENST00000615671 SRCIN1Q9C0H9 1055 aa22.17■■□□□ 1.14
GABPB1-212ENST00000615671 TSPY26PQ9H489 355 aa22.17■■□□□ 1.14
GABPB1-212ENST00000615671 WDR78Q5VTH9 848 aa22.16■■□□□ 1.14
GABPB1-212ENST00000615671 ANKLE2Q86XL3 938 aa22.16■■□□□ 1.14
GABPB1-212ENST00000615671 SCLT1Q96NL6 688 aa22.16■■□□□ 1.14
GABPB1-212ENST00000615671 SSR1P43307 286 aaKnown RBP22.16■■□□□ 1.14
GABPB1-212ENST00000615671 FAM43AQ8N2R8 423 aa22.16■■□□□ 1.14
GABPB1-212ENST00000615671 USHBP1Q8N6Y0 703 aa22.16■■□□□ 1.14
GABPB1-212ENST00000615671 PLCD4Q9BRC7 762 aa22.16■■□□□ 1.14
GABPB1-212ENST00000615671 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
GABPB1-212ENST00000615671 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
GABPB1-212ENST00000615671 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
GABPB1-212ENST00000615671 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
GABPB1-212ENST00000615671 UBAC1Q9BSL1 405 aa22.15■■□□□ 1.14
GABPB1-212ENST00000615671 CCDC39Q9UFE4 941 aa22.15■■□□□ 1.14
GABPB1-212ENST00000615671 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.14■■□□□ 1.14
GABPB1-212ENST00000615671 NOM1Q5C9Z4 860 aaKnown RBP22.14■■□□□ 1.13
GABPB1-212ENST00000615671 AXDND1Q5T1B0 1012 aaPredicted RBP22.14■■□□□ 1.13
GABPB1-212ENST00000615671 SRGAP3O43295 1099 aa22.14■■□□□ 1.13
GABPB1-212ENST00000615671 ANKIB1Q9P2G1 1089 aa22.14■■□□□ 1.13
GABPB1-212ENST00000615671 RTEL1-TNFRSF6BF6WH68 1400 aa22.13■■□□□ 1.13
GABPB1-212ENST00000615671 SEPT7Q16181 437 aaKnown RBP22.13■■□□□ 1.13
GABPB1-212ENST00000615671 NUTM1Q86Y26 1132 aa22.13■■□□□ 1.13
GABPB1-212ENST00000615671 CENPHQ9H3R5 247 aa22.13■■□□□ 1.13
GABPB1-212ENST00000615671 ZNHIT6Q9NWK9 470 aaKnown RBP22.13■■□□□ 1.13
GABPB1-212ENST00000615671 H0YHG0 523 aa22.13■■□□□ 1.13
GABPB1-212ENST00000615671 FGD6Q6ZV73 1430 aa22.12■■□□□ 1.13
GABPB1-212ENST00000615671 ZPR1O75312 459 aa22.12■■□□□ 1.13
GABPB1-212ENST00000615671 ENOX2Q16206 610 aaKnown RBP22.12■■□□□ 1.13
GABPB1-212ENST00000615671 SLC4A8Q2Y0W8 1093 aa22.12■■□□□ 1.13
GABPB1-212ENST00000615671 NFKBIBQ15653 356 aa22.11■■□□□ 1.13
GABPB1-212ENST00000615671 TRMT1LQ7Z2T5 733 aaKnown RBP22.11■■□□□ 1.13
GABPB1-212ENST00000615671 CCDC181Q5TID7 509 aa22.11■■□□□ 1.13
GABPB1-212ENST00000615671 SPDYE4A6NLX3 237 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 CRACR2BQ8N4Y2 399 aaPredicted RBP22.1■■□□□ 1.13
GABPB1-212ENST00000615671 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
GABPB1-212ENST00000615671 DHX8Q14562 1220 aaKnown RBP22.1■■□□□ 1.13
GABPB1-212ENST00000615671 STIM1Q13586 685 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 ZSCAN25Q6NSZ9 544 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 PPFIBP1Q86W92 1011 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 TMOD2Q9NZR1 351 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 MINDY4BA8MYZ0 360 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 FAM193AP78312 1265 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 METTL24Q5JXM2 366 aa22.1■■□□□ 1.13
GABPB1-212ENST00000615671 POLR3DP05423 398 aaPredicted RBP22.09■■□□□ 1.13
GABPB1-212ENST00000615671 SCAPERQ9BY12 1400 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 TNMDQ9H2S6 317 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 TAX1BP1Q86VP1 789 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 TRAK2O60296 914 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 MPRIPQ6WCQ1 1025 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 DDX11Q96FC9 970 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 JAKMIP1Q96N16 626 aaKnown RBP22.09■■□□□ 1.13
GABPB1-212ENST00000615671 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 CUX1P39880 1505 aa22.09■■□□□ 1.13
GABPB1-212ENST00000615671 DCTN1Q14203 1278 aa22.08■■□□□ 1.13
GABPB1-212ENST00000615671 NOL7Q9UMY1 257 aaKnown RBP22.08■■□□□ 1.13
GABPB1-212ENST00000615671 LIG1P18858 919 aa22.08■■□□□ 1.13
GABPB1-212ENST00000615671 CEP126Q9P2H0 1117 aa22.08■■□□□ 1.13
GABPB1-212ENST00000615671 AIDAQ96BJ3 306 aa22.08■■□□□ 1.12
GABPB1-212ENST00000615671 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.12
GABPB1-212ENST00000615671 LETM1O95202 739 aaPredicted RBP22.07■■□□□ 1.12
GABPB1-212ENST00000615671 LARP1BQ659C4 914 aaKnown RBP22.07■■□□□ 1.12
GABPB1-212ENST00000615671 PNISRQ8TF01 805 aaKnown RBP22.07■■□□□ 1.12
GABPB1-212ENST00000615671 TMOD3Q9NYL9 352 aa22.07■■□□□ 1.12
GABPB1-212ENST00000615671 TSPYL1Q9H0U9 437 aa22.06■■□□□ 1.12
GABPB1-212ENST00000615671 PDRG1Q9NUG6 133 aa22.06■■□□□ 1.12
GABPB1-212ENST00000615671 PDCP20941 246 aa22.06■■□□□ 1.12
GABPB1-212ENST00000615671 GRM1Q13255 1194 aa22.06■■□□□ 1.12
GABPB1-212ENST00000615671 ERCC4Q92889 916 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms