RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 RGS22Q8NE09 1264 aa11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 RTEL1-TNFRSF6BF6WH68 1400 aa11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 ZRSR2Q15696 482 aaKnown RBP11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 CPLX1O14810 134 aa11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 BIRC2Q13490 618 aa11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 THUMPD2Q9BTF0 503 aaKnown RBP11.31□□□□□ -0.6
SRGAP2B-204ENST00000612199 GNAI3P08754 354 aa11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 TPM1P09493 284 aa11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 HDGFL1Q5TGJ6 251 aa11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 RBM42Q9BTD8 480 aaKnown RBP11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 SEPT7Q16181 437 aaKnown RBP11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 CT47B1P0C2W7 299 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 ABCC5O15440 1437 aa11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 DDX54Q8TDD1 881 aaKnown RBP11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 PDCL3Q9H2J4 239 aa11.3□□□□□ -0.6
SRGAP2B-204ENST00000612199 CCDC47Q96A33 483 aaKnown RBP11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 BIN2Q9UBW5 565 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 CAMSAP2Q08AD1 1489 aa11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 NFXL1Q6ZNB6 911 aa11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 RDXP35241 583 aaKnown RBP11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 TRDNQ13061 729 aa11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 MIS18AQ9NYP9 233 aa11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 ANKRD30BQ9BXX2 1392 aa11.29□□□□□ -0.6
SRGAP2B-204ENST00000612199 SYCP1Q15431 976 aa11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 ZNF530Q6P9A1 599 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 CLASRPQ8N2M8 674 aaKnown RBP11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 NSD3Q9BZ95 1437 aa11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 NFKBIBQ15653 356 aa11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 ZNF608Q9ULD9 1512 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 OFD1O75665 1012 aa11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 SMC3Q9UQE7 1217 aa11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
SRGAP2B-204ENST00000612199 CCDC141Q6ZP82 1450 aa11.27□□□□□ -0.6
SRGAP2B-204ENST00000612199 NUDT16Q96DE0 195 aaKnown RBP11.27□□□□□ -0.6
SRGAP2B-204ENST00000612199 MYL6BP14649 208 aa11.27□□□□□ -0.6
SRGAP2B-204ENST00000612199 FSD1Q9BTV5 496 aa11.27□□□□□ -0.6
SRGAP2B-204ENST00000612199 NINLQ9Y2I6 1382 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 ADGRF5Q8IZF2 1346 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 BICD2Q8TD16 824 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 SIL1Q9H173 461 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 HSP90AB3PQ58FF7 597 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 SKAP1Q86WV1 359 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 WDR63Q8IWG1 891 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZNF526Q8TF50 670 aaPredicted RBP11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 GCC1Q96CN9 775 aa11.27□□□□□ -0.61
SRGAP2B-204ENST00000612199 TRIM29Q14134 588 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 PTPN23Q9H3S7 1636 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 LRSAM1Q6UWE0 723 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 ATF7IPQ6VMQ6 1270 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 TOM1L2Q6ZVM7 507 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 NF2P35240 595 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 CEBPAP49715 358 aaPredicted RBP11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 CPLX3Q8WVH0 158 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 CD109Q6YHK3 1445 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 TATP17735 454 aaPredicted RBP11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZHX3Q9H4I2 956 aa11.26□□□□□ -0.61
SRGAP2B-204ENST00000612199 ENOX2Q16206 610 aaKnown RBP11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZNF592Q92610 1267 aa11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 URB2Q14146 1524 aaKnown RBP11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 SMG6Q86US8 1419 aaKnown RBP11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 MAP4K4O95819 1239 aaPredicted RBP11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 GNAI2P04899 355 aa11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 RUFY1Q96T51 708 aa11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 NEK4P51957 841 aa11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 LAMC3Q9Y6N6 1575 aa11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 IPO7O95373 1038 aaKnown RBP11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZSCAN29Q8IWY8 852 aaPredicted RBP11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 IDI1Q13907 227 aa11.25□□□□□ -0.61
SRGAP2B-204ENST00000612199 TMPOP42166 694 aaKnown RBP11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 MCM10Q7L590 875 aa11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 HSP90AA2PQ14568 343 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZNF354CQ86Y25 554 aa11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 DZIP1Q86YF9 867 aaKnown RBP11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 MCM2P49736 904 aa11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 MRE11P49959 708 aa11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 NME9Q86XW9 330 aa11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 CNTROBQ8N137 903 aa11.24□□□□□ -0.61
SRGAP2B-204ENST00000612199 ERICH2A1L162 156 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 SSR1P43307 286 aaKnown RBP11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 CLGNO14967 610 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZWINTO95229 277 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 MVPQ14764 893 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms