RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TBC1D9Q6ZT07 1266 aa27.8■■■□□ 2.04
SHANK2-220ENST00000608988 CDC45O75419 566 aa27.79■■■□□ 2.04
SHANK2-220ENST00000608988 ABCC4O15439 1325 aa27.79■■■□□ 2.04
SHANK2-220ENST00000608988 PPP1R9BQ96SB3 815 aa27.78■■■□□ 2.04
SHANK2-220ENST00000608988 TPM2P07951 284 aa27.77■■■□□ 2.04
SHANK2-220ENST00000608988 KLHL40Q2TBA0 621 aa27.76■■■□□ 2.04
SHANK2-220ENST00000608988 GAS2L3Q86XJ1 694 aa27.76■■■□□ 2.04
SHANK2-220ENST00000608988 IFT57Q9NWB7 429 aa27.76■■■□□ 2.04
SHANK2-220ENST00000608988 SLC52A1Q9NWF4 448 aa27.76■■■□□ 2.04
SHANK2-220ENST00000608988 VAMP4O75379 141 aa27.76■■■□□ 2.03
SHANK2-220ENST00000608988 GNAI1P63096 354 aa27.76■■■□□ 2.03
SHANK2-220ENST00000608988 NFE2L2Q16236 605 aa27.76■■■□□ 2.03
SHANK2-220ENST00000608988 RABEP1Q15276 862 aa27.75■■■□□ 2.03
SHANK2-220ENST00000608988 YEATS2Q9ULM3 1422 aa27.74■■■□□ 2.03
SHANK2-220ENST00000608988 ANP32BQ92688 251 aaKnown RBP27.74■■■□□ 2.03
SHANK2-220ENST00000608988 ERBB4Q15303 1308 aa27.73■■■□□ 2.03
SHANK2-220ENST00000608988 API5Q9BZZ5 524 aaKnown RBP27.73■■■□□ 2.03
SHANK2-220ENST00000608988 YTHDC2Q9H6S0 1430 aaKnown RBP27.73■■■□□ 2.03
SHANK2-220ENST00000608988 HSP90AA2PQ14568 343 aaPredicted RBP27.72■■■□□ 2.03
SHANK2-220ENST00000608988 NUCB2P80303 420 aa27.72■■■□□ 2.03
SHANK2-220ENST00000608988 ATP7BP35670 1465 aa27.71■■■□□ 2.03
SHANK2-220ENST00000608988 ARHGEF40Q8TER5 1519 aa27.71■■■□□ 2.03
SHANK2-220ENST00000608988 ZNF853P0CG23 659 aa27.7■■■□□ 2.03
SHANK2-220ENST00000608988 PRKAR2BP31323 418 aa27.7■■■□□ 2.03
SHANK2-220ENST00000608988 LMOD3Q0VAK6 560 aa27.7■■■□□ 2.02
SHANK2-220ENST00000608988 TMEM131LA2VDJ0 1609 aa27.7■■■□□ 2.02
SHANK2-220ENST00000608988 CD2BP2O95400 341 aaKnown RBP27.69■■■□□ 2.02
SHANK2-220ENST00000608988 GAS2L2Q8NHY3 880 aa27.69■■■□□ 2.02
SHANK2-220ENST00000608988 BAG4O95429 457 aaKnown RBP27.68■■■□□ 2.02
SHANK2-220ENST00000608988 NASPP49321 788 aaPredicted RBP27.68■■■□□ 2.02
SHANK2-220ENST00000608988 ZNF445P59923 1031 aa27.68■■■□□ 2.02
SHANK2-220ENST00000608988 SSFA2P28290 1259 aa27.68■■■□□ 2.02
SHANK2-220ENST00000608988 HS1BP3Q53T59 392 aa27.68■■■□□ 2.02
SHANK2-220ENST00000608988 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
SHANK2-220ENST00000608988 SIRT2Q8IXJ6 389 aa27.67■■■□□ 2.02
SHANK2-220ENST00000608988 NEO1Q92859 1461 aa27.67■■■□□ 2.02
SHANK2-220ENST00000608988 SAFB2Q14151 953 aaKnown RBP eCLIP27.66■■■□□ 2.02
SHANK2-220ENST00000608988 CWC22Q9HCG8 908 aaKnown RBP27.66■■■□□ 2.02
SHANK2-220ENST00000608988 DIP2CQ9Y2E4 1556 aa27.66■■■□□ 2.02
SHANK2-220ENST00000608988 ZSCAN30Q86W11 494 aa27.66■■■□□ 2.02
SHANK2-220ENST00000608988 DLC1Q96QB1 1528 aa27.65■■■□□ 2.02
SHANK2-220ENST00000608988 TERF1P54274 439 aa27.65■■■□□ 2.02
SHANK2-220ENST00000608988 IDI1Q13907 227 aa27.65■■■□□ 2.02
SHANK2-220ENST00000608988 PRAM1Q96QH2 718 aa27.65■■■□□ 2.02
SHANK2-220ENST00000608988 CDK12Q9NYV4 1490 aaPredicted RBP27.64■■■□□ 2.02
SHANK2-220ENST00000608988 DDX49Q9Y6V7 483 aaKnown RBP27.64■■■□□ 2.02
SHANK2-220ENST00000608988 MINK1Q8N4C8 1332 aaPredicted RBP27.64■■■□□ 2.02
SHANK2-220ENST00000608988 STK26Q9P289 416 aa27.64■■■□□ 2.01
SHANK2-220ENST00000608988 POLKQ9UBT6 870 aa27.64■■■□□ 2.01
SHANK2-220ENST00000608988 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
SHANK2-220ENST00000608988 DCTPP1Q9H773 170 aa27.63■■■□□ 2.01
SHANK2-220ENST00000608988 PREX1Q8TCU6 1659 aa27.62■■■□□ 2.01
SHANK2-220ENST00000608988 CYP2E1P05181 493 aaPredicted RBP27.62■■■□□ 2.01
SHANK2-220ENST00000608988 PLEKHM2Q8IWE5 1019 aa27.62■■■□□ 2.01
SHANK2-220ENST00000608988 CPSF1Q10570 1443 aaKnown RBP27.62■■■□□ 2.01
SHANK2-220ENST00000608988 HAP1P54257 671 aaPredicted RBP27.61■■■□□ 2.01
SHANK2-220ENST00000608988 TTC22Q5TAA0 569 aa27.61■■■□□ 2.01
SHANK2-220ENST00000608988 CDK19Q9BWU1 502 aa27.61■■■□□ 2.01
SHANK2-220ENST00000608988 MYO5BQ9ULV0 1848 aa27.61■■■□□ 2.01
SHANK2-220ENST00000608988 INTS3Q68E01 1043 aaKnown RBP27.61■■■□□ 2.01
SHANK2-220ENST00000608988 ALKQ9UM73 1620 aa27.61■■■□□ 2.01
SHANK2-220ENST00000608988 C1orf115Q9H7X2 142 aa27.6■■■□□ 2.01
SHANK2-220ENST00000608988 GSPT1P15170 499 aaKnown RBP27.59■■■□□ 2.01
SHANK2-220ENST00000608988 TWISTNBQ3B726 338 aaPredicted RBP27.59■■■□□ 2.01
SHANK2-220ENST00000608988 RBM42Q9BTD8 480 aaKnown RBP27.59■■■□□ 2.01
SHANK2-220ENST00000608988 MBIPQ9NS73 344 aa27.59■■■□□ 2.01
SHANK2-220ENST00000608988 AATKQ6ZMQ8 1374 aa27.59■■■□□ 2.01
SHANK2-220ENST00000608988 NPM1P06748 294 aaKnown RBP eCLIP27.58■■■□□ 2.01
SHANK2-220ENST00000608988 CASC1Q6TDU7 716 aa27.58■■■□□ 2.01
SHANK2-220ENST00000608988 USP26Q9BXU7 913 aa27.58■■■□□ 2.01
SHANK2-220ENST00000608988 FOXD4L1Q9NU39 408 aa27.58■■■□□ 2.01
SHANK2-220ENST00000608988 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.57■■■□□ 2
SHANK2-220ENST00000608988 TSPYL6Q8N831 410 aa27.57■■■□□ 2
SHANK2-220ENST00000608988 KNDC1Q76NI1 1749 aa27.57■■■□□ 2
SHANK2-220ENST00000608988 OFD1O75665 1012 aa27.57■■■□□ 2
SHANK2-220ENST00000608988 CABP1Q9NZU7 370 aa27.57■■■□□ 2
SHANK2-220ENST00000608988 MAP2P11137 1827 aaKnown RBP27.56■■■□□ 2
SHANK2-220ENST00000608988 PHACTR3Q96KR7 559 aa27.56■■■□□ 2
SHANK2-220ENST00000608988 IL13P35225 146 aa27.55■■■□□ 2
SHANK2-220ENST00000608988 RPAP2Q8IXW5 612 aaPredicted RBP27.55■■■□□ 2
SHANK2-220ENST00000608988 EDC4Q6P2E9 1401 aaKnown RBP27.55■■■□□ 2
SHANK2-220ENST00000608988 ANKRD44Q8N8A2 993 aa27.55■■■□□ 2
SHANK2-220ENST00000608988 ST18O60284 1047 aa27.54■■■□□ 2
SHANK2-220ENST00000608988 MSNP26038 577 aaKnown RBP27.54■■■□□ 2
SHANK2-220ENST00000608988 RIMS2Q9UQ26 1411 aa27.54■■■□□ 2
SHANK2-220ENST00000608988 LMBRD1Q9NUN5 540 aa27.53■■■□□ 2
SHANK2-220ENST00000608988 DLG5Q8TDM6 1919 aa27.51■■■□□ 2
SHANK2-220ENST00000608988 ZSCAN23Q3MJ62 389 aa27.51■■□□□ 1.99
SHANK2-220ENST00000608988 MCTP1Q6DN14 999 aa27.51■■□□□ 1.99
SHANK2-220ENST00000608988 ATP10DQ9P241 1426 aa27.5■■□□□ 1.99
SHANK2-220ENST00000608988 REC8O95072 547 aa27.5■■□□□ 1.99
SHANK2-220ENST00000608988 PDLIM2Q96JY6 352 aa27.5■■□□□ 1.99
SHANK2-220ENST00000608988 PDCL3Q9H2J4 239 aa27.5■■□□□ 1.99
SHANK2-220ENST00000608988 THUMPD2Q9BTF0 503 aaKnown RBP27.49■■□□□ 1.99
SHANK2-220ENST00000608988 HMOX1P09601 288 aa27.48■■□□□ 1.99
SHANK2-220ENST00000608988 MCM5P33992 734 aa27.48■■□□□ 1.99
SHANK2-220ENST00000608988 KIAA1211Q6ZU35 1233 aa27.48■■□□□ 1.99
SHANK2-220ENST00000608988 C8orf58Q8NAV2 365 aa27.48■■□□□ 1.99
SHANK2-220ENST00000608988 RICTORQ6R327 1708 aa27.47■■□□□ 1.99
SHANK2-220ENST00000608988 ZNF500O60304 480 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms