RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 PARP4Q9UKK3 1724 aaKnown RBP18.85■□□□□ 0.61
CTSA-213ENST00000606782 C11orf95C9JLR9 678 aaPredicted RBP18.84■□□□□ 0.61
CTSA-213ENST00000606782 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
CTSA-213ENST00000606782 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
CTSA-213ENST00000606782 ABCC6O95255 1503 aa18.84■□□□□ 0.61
CTSA-213ENST00000606782 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.6
CTSA-213ENST00000606782 HDGFL2Q7Z4V5 671 aaPredicted RBP18.83■□□□□ 0.6
CTSA-213ENST00000606782 TMC1Q8TDI8 760 aa18.83■□□□□ 0.6
CTSA-213ENST00000606782 CAMKK2Q96RR4 588 aa18.83■□□□□ 0.6
CTSA-213ENST00000606782 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.6
CTSA-213ENST00000606782 NINLQ9Y2I6 1382 aa18.82■□□□□ 0.6
CTSA-213ENST00000606782 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
CTSA-213ENST00000606782 TRIM37O94972 964 aa18.82■□□□□ 0.6
CTSA-213ENST00000606782 TOM1L2Q6ZVM7 507 aa18.82■□□□□ 0.6
CTSA-213ENST00000606782 TERF2IPQ9NYB0 399 aa18.82■□□□□ 0.6
CTSA-213ENST00000606782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.81■□□□□ 0.6
CTSA-213ENST00000606782 CDCA7Q9BWT1 371 aaPredicted RBP18.81■□□□□ 0.6
CTSA-213ENST00000606782 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
CTSA-213ENST00000606782 NME9Q86XW9 330 aa18.8■□□□□ 0.6
CTSA-213ENST00000606782 CARD10Q9BWT7 1032 aa18.8■□□□□ 0.6
CTSA-213ENST00000606782 A0A1W2PP64 1363 aa18.8■□□□□ 0.6
CTSA-213ENST00000606782 RGPD5Q99666 1765 aa18.78■□□□□ 0.6
CTSA-213ENST00000606782 SOX12O15370 315 aa18.78■□□□□ 0.6
CTSA-213ENST00000606782 APBA3O96018 575 aa18.78■□□□□ 0.6
CTSA-213ENST00000606782 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
CTSA-213ENST00000606782 PEAK1Q9H792 1746 aa18.77■□□□□ 0.6
CTSA-213ENST00000606782 DDB1Q16531 1140 aa18.77■□□□□ 0.6
CTSA-213ENST00000606782 OVOS2A0A0G2JMS6 1433 aa18.76■□□□□ 0.59
CTSA-213ENST00000606782 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
CTSA-213ENST00000606782 BCL9O00512 1426 aa18.76■□□□□ 0.59
CTSA-213ENST00000606782 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
CTSA-213ENST00000606782 LRRC37A3O60309 1634 aa18.76■□□□□ 0.59
CTSA-213ENST00000606782 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
CTSA-213ENST00000606782 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
CTSA-213ENST00000606782 USP47Q96K76 1375 aa18.74■□□□□ 0.59
CTSA-213ENST00000606782 ERBB3P21860 1342 aa18.74■□□□□ 0.59
CTSA-213ENST00000606782 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
CTSA-213ENST00000606782 CSB-PGBD3P0DP91 1061 aa18.73■□□□□ 0.59
CTSA-213ENST00000606782 MARCH10Q8NA82 808 aaPredicted RBP18.73■□□□□ 0.59
CTSA-213ENST00000606782 LRP5O75197 1615 aa18.73■□□□□ 0.59
CTSA-213ENST00000606782 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
CTSA-213ENST00000606782 RREB1Q92766 1687 aa18.71■□□□□ 0.59
CTSA-213ENST00000606782 TMF1P82094 1093 aa18.71■□□□□ 0.59
CTSA-213ENST00000606782 LTN1O94822 1766 aa18.7■□□□□ 0.58
CTSA-213ENST00000606782 SBF2Q86WG5 1849 aa18.7■□□□□ 0.58
CTSA-213ENST00000606782 PLSCR1O15162 318 aa18.7■□□□□ 0.58
CTSA-213ENST00000606782 EXOC5O00471 708 aa18.69■□□□□ 0.58
CTSA-213ENST00000606782 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
CTSA-213ENST00000606782 BCL11BQ9C0K0 894 aaPredicted RBP18.69■□□□□ 0.58
CTSA-213ENST00000606782 CDCA8Q53HL2 280 aa18.68■□□□□ 0.58
CTSA-213ENST00000606782 ANKRD24Q8TF21 1146 aa18.68■□□□□ 0.58
CTSA-213ENST00000606782 IP6K1Q92551 441 aa18.68■□□□□ 0.58
CTSA-213ENST00000606782 COG3Q96JB2 828 aa18.67■□□□□ 0.58
CTSA-213ENST00000606782 RGPD3A6NKT7 1758 aaPredicted RBP18.67■□□□□ 0.58
CTSA-213ENST00000606782 RGPD4Q7Z3J3 1758 aa18.67■□□□□ 0.58
CTSA-213ENST00000606782 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
CTSA-213ENST00000606782 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
CTSA-213ENST00000606782 TNS2Q63HR2 1409 aa18.66■□□□□ 0.58
CTSA-213ENST00000606782 FYB1O15117 783 aa18.65■□□□□ 0.58
CTSA-213ENST00000606782 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
CTSA-213ENST00000606782 IL2RBP14784 551 aa18.64■□□□□ 0.57
CTSA-213ENST00000606782 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
CTSA-213ENST00000606782 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.57
CTSA-213ENST00000606782 HOXC9P31274 260 aa18.61■□□□□ 0.57
CTSA-213ENST00000606782 PROM2Q8N271 834 aa18.61■□□□□ 0.57
CTSA-213ENST00000606782 FAM208AQ9UK61 1670 aaKnown RBP18.6■□□□□ 0.57
CTSA-213ENST00000606782 FBLN1P23142 703 aa18.6■□□□□ 0.57
CTSA-213ENST00000606782 RTL1A6NKG5 1358 aa18.59■□□□□ 0.57
CTSA-213ENST00000606782 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
CTSA-213ENST00000606782 AMPHP49418 695 aa18.58■□□□□ 0.56
CTSA-213ENST00000606782 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.56
CTSA-213ENST00000606782 KCNQ2O43526 872 aa18.57■□□□□ 0.56
CTSA-213ENST00000606782 ZEB1P37275 1124 aaPredicted RBP18.56■□□□□ 0.56
CTSA-213ENST00000606782 MYOM1P52179 1685 aa18.56■□□□□ 0.56
CTSA-213ENST00000606782 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
CTSA-213ENST00000606782 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
CTSA-213ENST00000606782 LTV1Q96GA3 475 aaPredicted RBP18.55■□□□□ 0.56
CTSA-213ENST00000606782 RRS1Q15050 365 aaKnown RBP18.54■□□□□ 0.56
CTSA-213ENST00000606782 TXNRD1Q16881 649 aa18.54■□□□□ 0.56
CTSA-213ENST00000606782 ANO8Q9HCE9 1232 aaPredicted RBP18.54■□□□□ 0.56
CTSA-213ENST00000606782 KIF20BQ96Q89 1820 aa18.52■□□□□ 0.56
CTSA-213ENST00000606782 INSRP06213 1382 aa18.52■□□□□ 0.55
CTSA-213ENST00000606782 NSD3Q9BZ95 1437 aa18.51■□□□□ 0.55
CTSA-213ENST00000606782 NBPF6Q5VWK0 638 aa18.51■□□□□ 0.55
CTSA-213ENST00000606782 ACSBG1Q96GR2 724 aa18.51■□□□□ 0.55
CTSA-213ENST00000606782 NBPF4Q96M43 638 aa18.51■□□□□ 0.55
CTSA-213ENST00000606782 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
CTSA-213ENST00000606782 SPON1Q9HCB6 807 aa18.5■□□□□ 0.55
CTSA-213ENST00000606782 FLT4P35916 1363 aa18.5■□□□□ 0.55
CTSA-213ENST00000606782 RGPD2P0DJD1 1756 aa18.5■□□□□ 0.55
CTSA-213ENST00000606782 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
CTSA-213ENST00000606782 HSP90AB2PQ58FF8 381 aa18.49■□□□□ 0.55
CTSA-213ENST00000606782 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
CTSA-213ENST00000606782 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
CTSA-213ENST00000606782 KAT6BQ8WYB5 2073 aa18.49■□□□□ 0.55
CTSA-213ENST00000606782 CASZ1Q86V15 1759 aa18.48■□□□□ 0.55
CTSA-213ENST00000606782 SLC15A2Q16348 729 aa18.48■□□□□ 0.55
CTSA-213ENST00000606782 BTAF1O14981 1849 aa18.48■□□□□ 0.55
CTSA-213ENST00000606782 MEGF6O75095 1541 aa18.48■□□□□ 0.55
CTSA-213ENST00000606782 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms