RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-206ENST00000601697 UPF2Q9HAU5 1272 aaKnown RBP17.95■□□□□ 0.46
PSMC4-206ENST00000601697 ACEP12821 1306 aa17.95■□□□□ 0.46
PSMC4-206ENST00000601697 RLBP1P12271 317 aa17.94■□□□□ 0.46
PSMC4-206ENST00000601697 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
PSMC4-206ENST00000601697 SMC4Q9NTJ3 1288 aa17.94■□□□□ 0.46
PSMC4-206ENST00000601697 USP6P35125 1406 aa17.94■□□□□ 0.46
PSMC4-206ENST00000601697 BECN1Q14457 450 aa17.94■□□□□ 0.46
PSMC4-206ENST00000601697 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
PSMC4-206ENST00000601697 STRCP1A6NGW2 1772 aa17.93■□□□□ 0.46
PSMC4-206ENST00000601697 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
PSMC4-206ENST00000601697 KIF16BQ96L93 1317 aa17.93■□□□□ 0.46
PSMC4-206ENST00000601697 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
PSMC4-206ENST00000601697 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
PSMC4-206ENST00000601697 TRIM35Q9UPQ4 493 aa17.93■□□□□ 0.46
PSMC4-206ENST00000601697 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
PSMC4-206ENST00000601697 FCHSD2O94868 740 aa17.92■□□□□ 0.46
PSMC4-206ENST00000601697 EXOSC9Q06265 439 aaKnown RBP17.92■□□□□ 0.46
PSMC4-206ENST00000601697 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
PSMC4-206ENST00000601697 IPO8O15397 1037 aaKnown RBP17.91■□□□□ 0.46
PSMC4-206ENST00000601697 KCNA6P17658 529 aa17.91■□□□□ 0.46
PSMC4-206ENST00000601697 RIPK4P57078 832 aa17.91■□□□□ 0.46
PSMC4-206ENST00000601697 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
PSMC4-206ENST00000601697 EMILIN1Q9Y6C2 1016 aa17.91■□□□□ 0.46
PSMC4-206ENST00000601697 ANKARQ7Z5J8 1434 aa17.91■□□□□ 0.46
PSMC4-206ENST00000601697 FBLN1P23142 703 aa17.9■□□□□ 0.46
PSMC4-206ENST00000601697 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
PSMC4-206ENST00000601697 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
PSMC4-206ENST00000601697 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
PSMC4-206ENST00000601697 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
PSMC4-206ENST00000601697 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
PSMC4-206ENST00000601697 NFKBIBQ15653 356 aa17.89■□□□□ 0.45
PSMC4-206ENST00000601697 ALDH1L2Q3SY69 923 aa17.89■□□□□ 0.45
PSMC4-206ENST00000601697 ATF7IPQ6VMQ6 1270 aa17.89■□□□□ 0.45
PSMC4-206ENST00000601697 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
PSMC4-206ENST00000601697 TNNQ9UQP3 1299 aa17.89■□□□□ 0.45
PSMC4-206ENST00000601697 HDAC1Q13547 482 aaPredicted RBP17.88■□□□□ 0.45
PSMC4-206ENST00000601697 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
PSMC4-206ENST00000601697 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
PSMC4-206ENST00000601697 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
PSMC4-206ENST00000601697 SLC4A3P48751 1232 aa17.87■□□□□ 0.45
PSMC4-206ENST00000601697 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
PSMC4-206ENST00000601697 IL13P35225 146 aa17.87■□□□□ 0.45
PSMC4-206ENST00000601697 SSH1Q8WYL5 1049 aa17.87■□□□□ 0.45
PSMC4-206ENST00000601697 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
PSMC4-206ENST00000601697 USP19O94966 1318 aa17.86■□□□□ 0.45
PSMC4-206ENST00000601697 TRIM27P14373 513 aa17.86■□□□□ 0.45
PSMC4-206ENST00000601697 RRS1Q15050 365 aaKnown RBP17.86■□□□□ 0.45
PSMC4-206ENST00000601697 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
PSMC4-206ENST00000601697 FMN2Q9NZ56 1722 aa17.86■□□□□ 0.45
PSMC4-206ENST00000601697 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
PSMC4-206ENST00000601697 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
PSMC4-206ENST00000601697 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
PSMC4-206ENST00000601697 NGDNQ8NEJ9 315 aaKnown RBP17.84■□□□□ 0.45
PSMC4-206ENST00000601697 NOB1Q9ULX3 412 aaKnown RBP17.83■□□□□ 0.45
PSMC4-206ENST00000601697 ZNF335Q9H4Z2 1342 aaPredicted RBP17.83■□□□□ 0.45
PSMC4-206ENST00000601697 BRPF1P55201 1214 aaPredicted RBP17.83■□□□□ 0.44
PSMC4-206ENST00000601697 LMOD3Q0VAK6 560 aa17.83■□□□□ 0.44
PSMC4-206ENST00000601697 NFE2L2Q16236 605 aa17.83■□□□□ 0.44
PSMC4-206ENST00000601697 TBC1D32Q96NH3 1257 aa17.82■□□□□ 0.44
PSMC4-206ENST00000601697 HMOX1P09601 288 aa17.81■□□□□ 0.44
PSMC4-206ENST00000601697 GSE1Q14687 1217 aa17.8■□□□□ 0.44
PSMC4-206ENST00000601697 SEC24BO95487 1268 aa17.8■□□□□ 0.44
PSMC4-206ENST00000601697 GNAI1P63096 354 aa17.8■□□□□ 0.44
PSMC4-206ENST00000601697 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
PSMC4-206ENST00000601697 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
PSMC4-206ENST00000601697 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
PSMC4-206ENST00000601697 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
PSMC4-206ENST00000601697 TMEM57Q8N5G2 664 aa17.79■□□□□ 0.44
PSMC4-206ENST00000601697 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
PSMC4-206ENST00000601697 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
PSMC4-206ENST00000601697 ARHGAP45Q92619 1136 aa17.78■□□□□ 0.44
PSMC4-206ENST00000601697 ZBTB40Q9NUA8 1239 aa17.78■□□□□ 0.44
PSMC4-206ENST00000601697 LTBP4Q8N2S1 1624 aa17.77■□□□□ 0.44
PSMC4-206ENST00000601697 PIK3C2AO00443 1686 aa17.77■□□□□ 0.43
PSMC4-206ENST00000601697 EIF4A2Q14240 407 aaKnown RBP17.76■□□□□ 0.43
PSMC4-206ENST00000601697 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
PSMC4-206ENST00000601697 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
PSMC4-206ENST00000601697 TMEM94Q12767 1356 aa17.76■□□□□ 0.43
PSMC4-206ENST00000601697 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
PSMC4-206ENST00000601697 NCOA3Q9Y6Q9 1424 aa17.75■□□□□ 0.43
PSMC4-206ENST00000601697 SBNO1A3KN83 1393 aa17.75■□□□□ 0.43
PSMC4-206ENST00000601697 MAP3K19Q56UN5 1328 aa17.74■□□□□ 0.43
PSMC4-206ENST00000601697 SOX12O15370 315 aa17.73■□□□□ 0.43
PSMC4-206ENST00000601697 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
PSMC4-206ENST00000601697 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
PSMC4-206ENST00000601697 DLG5Q8TDM6 1919 aa17.73■□□□□ 0.43
PSMC4-206ENST00000601697 FLT4P35916 1363 aa17.73■□□□□ 0.43
PSMC4-206ENST00000601697 FRAT2O75474 233 aaPredicted RBP17.72■□□□□ 0.43
PSMC4-206ENST00000601697 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
PSMC4-206ENST00000601697 NUCB1Q02818 461 aa17.72■□□□□ 0.43
PSMC4-206ENST00000601697 HSP90AB2PQ58FF8 381 aa17.72■□□□□ 0.43
PSMC4-206ENST00000601697 RGPD1P0DJD0 1748 aa17.71■□□□□ 0.43
PSMC4-206ENST00000601697 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
PSMC4-206ENST00000601697 NLRP6P59044 892 aa17.71■□□□□ 0.43
PSMC4-206ENST00000601697 MRPL50Q8N5N7 158 aaKnown RBP17.71■□□□□ 0.43
PSMC4-206ENST00000601697 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
PSMC4-206ENST00000601697 C22orf23Q9BZE7 217 aa17.71■□□□□ 0.43
PSMC4-206ENST00000601697 ARHGEF10O15013 1369 aa17.71■□□□□ 0.43
PSMC4-206ENST00000601697 VAMP4O75379 141 aa17.7■□□□□ 0.42
PSMC4-206ENST00000601697 SULT6B1Q6IMI4 303 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms