RNA–Protein interactions for RNA: ENST00000600032.5

FARP1-228, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-228ENST00000600032 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
FARP1-228ENST00000600032 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
FARP1-228ENST00000600032 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
FARP1-228ENST00000600032 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
FARP1-228ENST00000600032 PSME1Q06323 249 aa13.39□□□□□ -0.27
FARP1-228ENST00000600032 USP21Q9UK80 565 aa13.39□□□□□ -0.27
FARP1-228ENST00000600032 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
FARP1-228ENST00000600032 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
FARP1-228ENST00000600032 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
FARP1-228ENST00000600032 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
FARP1-228ENST00000600032 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
FARP1-228ENST00000600032 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
FARP1-228ENST00000600032 ANKARQ7Z5J8 1434 aa13.38□□□□□ -0.27
FARP1-228ENST00000600032 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
FARP1-228ENST00000600032 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
FARP1-228ENST00000600032 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
FARP1-228ENST00000600032 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
FARP1-228ENST00000600032 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
FARP1-228ENST00000600032 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
FARP1-228ENST00000600032 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
FARP1-228ENST00000600032 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
FARP1-228ENST00000600032 RGL2O15211 777 aa13.35□□□□□ -0.27
FARP1-228ENST00000600032 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
FARP1-228ENST00000600032 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
FARP1-228ENST00000600032 RGS12O14924 1447 aa13.35□□□□□ -0.27
FARP1-228ENST00000600032 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
FARP1-228ENST00000600032 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
FARP1-228ENST00000600032 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
FARP1-228ENST00000600032 ATRNO75882 1429 aa13.33□□□□□ -0.28
FARP1-228ENST00000600032 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
FARP1-228ENST00000600032 MFRPQ9BY79 579 aa13.32□□□□□ -0.28
FARP1-228ENST00000600032 TULP4Q9NRJ4 1543 aa13.32□□□□□ -0.28
FARP1-228ENST00000600032 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
FARP1-228ENST00000600032 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
FARP1-228ENST00000600032 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
FARP1-228ENST00000600032 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
FARP1-228ENST00000600032 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.31□□□□□ -0.28
FARP1-228ENST00000600032 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
FARP1-228ENST00000600032 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
FARP1-228ENST00000600032 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
FARP1-228ENST00000600032 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
FARP1-228ENST00000600032 HIRIP3Q9BW71 556 aaPredicted RBP13.31□□□□□ -0.28
FARP1-228ENST00000600032 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
FARP1-228ENST00000600032 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
FARP1-228ENST00000600032 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
FARP1-228ENST00000600032 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
FARP1-228ENST00000600032 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
FARP1-228ENST00000600032 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
FARP1-228ENST00000600032 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
FARP1-228ENST00000600032 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
FARP1-228ENST00000600032 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
FARP1-228ENST00000600032 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
FARP1-228ENST00000600032 SLIT2O94813 1529 aa13.28□□□□□ -0.28
FARP1-228ENST00000600032 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.29
FARP1-228ENST00000600032 EP400Q96L91 3159 aa13.26□□□□□ -0.29
FARP1-228ENST00000600032 ABCA3Q99758 1704 aa13.26□□□□□ -0.29
FARP1-228ENST00000600032 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
FARP1-228ENST00000600032 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
FARP1-228ENST00000600032 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
FARP1-228ENST00000600032 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
FARP1-228ENST00000600032 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
FARP1-228ENST00000600032 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
FARP1-228ENST00000600032 ATP7BP35670 1465 aa13.23□□□□□ -0.29
FARP1-228ENST00000600032 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
FARP1-228ENST00000600032 VPS72Q15906 364 aa13.23□□□□□ -0.29
FARP1-228ENST00000600032 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
FARP1-228ENST00000600032 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
FARP1-228ENST00000600032 ERBB3P21860 1342 aa13.22□□□□□ -0.29
FARP1-228ENST00000600032 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
FARP1-228ENST00000600032 GLI3P10071 1580 aa13.21□□□□□ -0.29
FARP1-228ENST00000600032 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
FARP1-228ENST00000600032 COL14A1Q05707 1796 aaKnown RBP13.21□□□□□ -0.29
FARP1-228ENST00000600032 CENPJQ9HC77 1338 aaPredicted RBP13.2□□□□□ -0.3
FARP1-228ENST00000600032 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
FARP1-228ENST00000600032 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
FARP1-228ENST00000600032 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
FARP1-228ENST00000600032 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
FARP1-228ENST00000600032 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
FARP1-228ENST00000600032 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
FARP1-228ENST00000600032 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
FARP1-228ENST00000600032 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
FARP1-228ENST00000600032 ACEP12821 1306 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 NRAPQ86VF7 1730 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 A0A0G2JS52 829 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 MYT1Q01538 1121 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 QRICH2Q9H0J4 1663 aa13.17□□□□□ -0.3
FARP1-228ENST00000600032 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
FARP1-228ENST00000600032 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
FARP1-228ENST00000600032 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
FARP1-228ENST00000600032 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
FARP1-228ENST00000600032 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
FARP1-228ENST00000600032 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
FARP1-228ENST00000600032 BLMP54132 1417 aaPredicted RBP13.15□□□□□ -0.3
FARP1-228ENST00000600032 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
FARP1-228ENST00000600032 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
FARP1-228ENST00000600032 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms