RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 TOM1L2Q6ZVM7 507 aa17.41■□□□□ 0.38
C19orf48-211ENST00000599004 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
C19orf48-211ENST00000599004 AATKQ6ZMQ8 1374 aa17.4■□□□□ 0.38
C19orf48-211ENST00000599004 AKAP12Q02952 1782 aa17.39■□□□□ 0.37
C19orf48-211ENST00000599004 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
C19orf48-211ENST00000599004 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
C19orf48-211ENST00000599004 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
C19orf48-211ENST00000599004 TXNRD1Q16881 649 aa17.38■□□□□ 0.37
C19orf48-211ENST00000599004 MTFR1LQ9H019 292 aa17.38■□□□□ 0.37
C19orf48-211ENST00000599004 BCL9O00512 1426 aa17.38■□□□□ 0.37
C19orf48-211ENST00000599004 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
C19orf48-211ENST00000599004 CDCA7Q9BWT1 371 aaPredicted RBP17.37■□□□□ 0.37
C19orf48-211ENST00000599004 NLRP6P59044 892 aa17.36■□□□□ 0.37
C19orf48-211ENST00000599004 SRPK2P78362 688 aaKnown RBP17.36■□□□□ 0.37
C19orf48-211ENST00000599004 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
C19orf48-211ENST00000599004 WDR17Q8IZU2 1322 aa17.35■□□□□ 0.37
C19orf48-211ENST00000599004 SLIT3O75094 1523 aa17.34■□□□□ 0.37
C19orf48-211ENST00000599004 COL18A1P39060 1754 aa17.34■□□□□ 0.37
C19orf48-211ENST00000599004 SGIP1Q9BQI5 828 aa17.34■□□□□ 0.37
C19orf48-211ENST00000599004 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
C19orf48-211ENST00000599004 IFFO2Q5TF58 517 aa17.33■□□□□ 0.36
C19orf48-211ENST00000599004 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.36
C19orf48-211ENST00000599004 ARXQ96QS3 562 aa17.32■□□□□ 0.36
C19orf48-211ENST00000599004 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
C19orf48-211ENST00000599004 USP6P35125 1406 aa17.31■□□□□ 0.36
C19orf48-211ENST00000599004 EXOC5O00471 708 aa17.3■□□□□ 0.36
C19orf48-211ENST00000599004 CSB-PGBD3P0DP91 1061 aa17.3■□□□□ 0.36
C19orf48-211ENST00000599004 CARD10Q9BWT7 1032 aa17.3■□□□□ 0.36
C19orf48-211ENST00000599004 KIAA1210Q9ULL0 1709 aa17.3■□□□□ 0.36
C19orf48-211ENST00000599004 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
C19orf48-211ENST00000599004 MAP3K5Q99683 1374 aa17.29■□□□□ 0.36
C19orf48-211ENST00000599004 GPR162Q16538 588 aa17.29■□□□□ 0.36
C19orf48-211ENST00000599004 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
C19orf48-211ENST00000599004 RGPD5Q99666 1765 aa17.29■□□□□ 0.36
C19orf48-211ENST00000599004 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
C19orf48-211ENST00000599004 PIK3C2AO00443 1686 aa17.28■□□□□ 0.36
C19orf48-211ENST00000599004 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
C19orf48-211ENST00000599004 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
C19orf48-211ENST00000599004 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
C19orf48-211ENST00000599004 NBPF1Q3BBV0 1214 aa17.26■□□□□ 0.35
C19orf48-211ENST00000599004 QRICH2Q9H0J4 1663 aa17.26■□□□□ 0.35
C19orf48-211ENST00000599004 TNS2Q63HR2 1409 aa17.25■□□□□ 0.35
C19orf48-211ENST00000599004 SOX12O15370 315 aa17.25■□□□□ 0.35
C19orf48-211ENST00000599004 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
C19orf48-211ENST00000599004 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
C19orf48-211ENST00000599004 PAPPAQ13219 1627 aa17.25■□□□□ 0.35
C19orf48-211ENST00000599004 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
C19orf48-211ENST00000599004 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
C19orf48-211ENST00000599004 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
C19orf48-211ENST00000599004 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
C19orf48-211ENST00000599004 ZNF827Q17R98 1081 aa17.22■□□□□ 0.35
C19orf48-211ENST00000599004 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
C19orf48-211ENST00000599004 BTAF1O14981 1849 aa17.21■□□□□ 0.35
C19orf48-211ENST00000599004 ABCC6O95255 1503 aa17.21■□□□□ 0.34
C19orf48-211ENST00000599004 CEP350Q5VT06 3117 aa17.21■□□□□ 0.34
C19orf48-211ENST00000599004 POLD1P28340 1107 aa17.2■□□□□ 0.34
C19orf48-211ENST00000599004 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
C19orf48-211ENST00000599004 NFAT5O94916 1531 aa17.18■□□□□ 0.34
C19orf48-211ENST00000599004 SLC16A10Q8TF71 515 aa17.18■□□□□ 0.34
C19orf48-211ENST00000599004 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
C19orf48-211ENST00000599004 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
C19orf48-211ENST00000599004 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
C19orf48-211ENST00000599004 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
C19orf48-211ENST00000599004 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
C19orf48-211ENST00000599004 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
C19orf48-211ENST00000599004 AKT1S1Q96B36 256 aa17.16■□□□□ 0.34
C19orf48-211ENST00000599004 NLRP2Q9NX02 1062 aa17.16■□□□□ 0.34
C19orf48-211ENST00000599004 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
C19orf48-211ENST00000599004 IL2RBP14784 551 aa17.15■□□□□ 0.34
C19orf48-211ENST00000599004 COL24A1Q17RW2 1714 aa17.15■□□□□ 0.34
C19orf48-211ENST00000599004 SLC27A3Q5K4L6 730 aa17.14■□□□□ 0.33
C19orf48-211ENST00000599004 NLGN2Q8NFZ4 835 aa17.14■□□□□ 0.33
C19orf48-211ENST00000599004 ERBB3P21860 1342 aa17.14■□□□□ 0.33
C19orf48-211ENST00000599004 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
C19orf48-211ENST00000599004 GRIN3BO60391 1043 aa17.12■□□□□ 0.33
C19orf48-211ENST00000599004 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
C19orf48-211ENST00000599004 KTN1Q86UP2 1357 aaKnown RBP17.11■□□□□ 0.33
C19orf48-211ENST00000599004 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
C19orf48-211ENST00000599004 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.33not detected■□□□□ 10.1
C19orf48-211ENST00000599004 LTN1O94822 1766 aa17.09■□□□□ 0.33
C19orf48-211ENST00000599004 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
C19orf48-211ENST00000599004 KCNQ4P56696 695 aa17.08■□□□□ 0.32
C19orf48-211ENST00000599004 ANKRD24Q8TF21 1146 aa17.08■□□□□ 0.32
C19orf48-211ENST00000599004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
C19orf48-211ENST00000599004 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
C19orf48-211ENST00000599004 USP31Q70CQ4 1352 aa17.06■□□□□ 0.32
C19orf48-211ENST00000599004 SYTL4Q96C24 671 aaPredicted RBP17.06■□□□□ 0.32
C19orf48-211ENST00000599004 MON2Q7Z3U7 1717 aa17.06■□□□□ 0.32
C19orf48-211ENST00000599004 GPBP1L1Q9HC44 474 aaPredicted RBP17.05■□□□□ 0.32
C19orf48-211ENST00000599004 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
C19orf48-211ENST00000599004 MSH5O43196 834 aa17.04■□□□□ 0.32
C19orf48-211ENST00000599004 NME9Q86XW9 330 aa17.04■□□□□ 0.32
C19orf48-211ENST00000599004 LY75O60449 1722 aa17.04■□□□□ 0.32
C19orf48-211ENST00000599004 HSPA6P17066 643 aa17.03■□□□□ 0.32
C19orf48-211ENST00000599004 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
C19orf48-211ENST00000599004 ANKRD36BQ8N2N9 1353 aa17.02■□□□□ 0.31
C19orf48-211ENST00000599004 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
C19orf48-211ENST00000599004 COL23A1Q86Y22 540 aaPredicted RBP17.01■□□□□ 0.31
C19orf48-211ENST00000599004 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
C19orf48-211ENST00000599004 MSL1Q68DK7 614 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms