RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-204ENST00000594552 TTC21AQ8NDW8 1320 aa18.38■□□□□ 0.53
CAPN12-204ENST00000594552 CRB1P82279 1406 aa18.38■□□□□ 0.53
CAPN12-204ENST00000594552 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
CAPN12-204ENST00000594552 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
CAPN12-204ENST00000594552 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
CAPN12-204ENST00000594552 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
CAPN12-204ENST00000594552 CPSF1Q10570 1443 aaKnown RBP18.36■□□□□ 0.53
CAPN12-204ENST00000594552 AATKQ6ZMQ8 1374 aa18.36■□□□□ 0.53
CAPN12-204ENST00000594552 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
CAPN12-204ENST00000594552 TRIM37O94972 964 aa18.35■□□□□ 0.53
CAPN12-204ENST00000594552 TOM1L2Q6ZVM7 507 aa18.35■□□□□ 0.53
CAPN12-204ENST00000594552 TMC1Q8TDI8 760 aa18.35■□□□□ 0.53
CAPN12-204ENST00000594552 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
CAPN12-204ENST00000594552 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
CAPN12-204ENST00000594552 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
CAPN12-204ENST00000594552 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
CAPN12-204ENST00000594552 HDGFL2Q7Z4V5 671 aaPredicted RBP18.34■□□□□ 0.53
CAPN12-204ENST00000594552 PSDA5PKW4 1024 aaPredicted RBP18.32■□□□□ 0.52
CAPN12-204ENST00000594552 APBA3O96018 575 aa18.32■□□□□ 0.52
CAPN12-204ENST00000594552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.32■□□□□ 0.52
CAPN12-204ENST00000594552 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
CAPN12-204ENST00000594552 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
CAPN12-204ENST00000594552 OVOS2A0A0J9YW53 1432 aa18.31■□□□□ 0.52
CAPN12-204ENST00000594552 OVOS2Q6IE36 1432 aa18.31■□□□□ 0.52
CAPN12-204ENST00000594552 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
CAPN12-204ENST00000594552 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
CAPN12-204ENST00000594552 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
CAPN12-204ENST00000594552 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
CAPN12-204ENST00000594552 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
CAPN12-204ENST00000594552 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
CAPN12-204ENST00000594552 LRP5O75197 1615 aa18.29■□□□□ 0.52
CAPN12-204ENST00000594552 SRCAPQ6ZRS2 3230 aa18.29■□□□□ 0.52
CAPN12-204ENST00000594552 ABCC6O95255 1503 aa18.28■□□□□ 0.52
CAPN12-204ENST00000594552 COL18A1P39060 1754 aa18.28■□□□□ 0.52
CAPN12-204ENST00000594552 DDB1Q16531 1140 aa18.28■□□□□ 0.52
CAPN12-204ENST00000594552 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
CAPN12-204ENST00000594552 NFAT5O94916 1531 aa18.28■□□□□ 0.52
CAPN12-204ENST00000594552 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
CAPN12-204ENST00000594552 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
CAPN12-204ENST00000594552 RGPD5Q99666 1765 aa18.27■□□□□ 0.51
CAPN12-204ENST00000594552 R3HDM1Q15032 1099 aaKnown RBP18.26■□□□□ 0.51
CAPN12-204ENST00000594552 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
CAPN12-204ENST00000594552 NINLQ9Y2I6 1382 aa18.25■□□□□ 0.51
CAPN12-204ENST00000594552 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
CAPN12-204ENST00000594552 NME9Q86XW9 330 aa18.24■□□□□ 0.51
CAPN12-204ENST00000594552 AXIN2Q9Y2T1 843 aa18.24■□□□□ 0.51
CAPN12-204ENST00000594552 RREB1Q92766 1687 aa18.24■□□□□ 0.51
CAPN12-204ENST00000594552 LTN1O94822 1766 aa18.24■□□□□ 0.51
CAPN12-204ENST00000594552 CD163L1Q9NR16 1453 aa18.23■□□□□ 0.51
CAPN12-204ENST00000594552 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
CAPN12-204ENST00000594552 USP31Q70CQ4 1352 aa18.23■□□□□ 0.51
CAPN12-204ENST00000594552 CCDC7Q96M83 1385 aa18.23■□□□□ 0.51
CAPN12-204ENST00000594552 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
CAPN12-204ENST00000594552 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
CAPN12-204ENST00000594552 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
CAPN12-204ENST00000594552 USP47Q96K76 1375 aa18.22■□□□□ 0.51
CAPN12-204ENST00000594552 CARD10Q9BWT7 1032 aa18.22■□□□□ 0.51
CAPN12-204ENST00000594552 NUP188Q5SRE5 1749 aa18.22■□□□□ 0.51
CAPN12-204ENST00000594552 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
CAPN12-204ENST00000594552 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
CAPN12-204ENST00000594552 PEAK1Q9H792 1746 aa18.2■□□□□ 0.5
CAPN12-204ENST00000594552 TNS2Q63HR2 1409 aa18.19■□□□□ 0.5
CAPN12-204ENST00000594552 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
CAPN12-204ENST00000594552 RGPD3A6NKT7 1758 aaPredicted RBP18.18■□□□□ 0.5
CAPN12-204ENST00000594552 RGPD4Q7Z3J3 1758 aa18.18■□□□□ 0.5
CAPN12-204ENST00000594552 EXOC5O00471 708 aa18.18■□□□□ 0.5
CAPN12-204ENST00000594552 ERBB3P21860 1342 aa18.18■□□□□ 0.5
CAPN12-204ENST00000594552 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
CAPN12-204ENST00000594552 TMF1P82094 1093 aa18.17■□□□□ 0.5
CAPN12-204ENST00000594552 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
CAPN12-204ENST00000594552 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
CAPN12-204ENST00000594552 COG3Q96JB2 828 aa18.16■□□□□ 0.5
CAPN12-204ENST00000594552 TESK2Q96S53 571 aa18.16■□□□□ 0.5
CAPN12-204ENST00000594552 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
CAPN12-204ENST00000594552 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
CAPN12-204ENST00000594552 CDCA8Q53HL2 280 aa18.14■□□□□ 0.49
CAPN12-204ENST00000594552 MARCH10Q8NA82 808 aaPredicted RBP18.14■□□□□ 0.49
CAPN12-204ENST00000594552 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
CAPN12-204ENST00000594552 IL2RBP14784 551 aa18.13■□□□□ 0.49
CAPN12-204ENST00000594552 BCL9O00512 1426 aa18.12■□□□□ 0.49
CAPN12-204ENST00000594552 LTV1Q96GA3 475 aaPredicted RBP18.11■□□□□ 0.49
CAPN12-204ENST00000594552 PLSCR1O15162 318 aa18.1■□□□□ 0.49
CAPN12-204ENST00000594552 AMPHP49418 695 aa18.1■□□□□ 0.49
CAPN12-204ENST00000594552 PPP1R1BQ9UD71 204 aaPredicted RBP18.1■□□□□ 0.49
CAPN12-204ENST00000594552 NHSQ6T4R5 1651 aa18.09■□□□□ 0.49
CAPN12-204ENST00000594552 CACNB1Q02641 598 aaPredicted RBP18.09■□□□□ 0.49
CAPN12-204ENST00000594552 SMG6Q86US8 1419 aaKnown RBP18.08■□□□□ 0.49
CAPN12-204ENST00000594552 IP6K1Q92551 441 aa18.08■□□□□ 0.48
CAPN12-204ENST00000594552 KIF20BQ96Q89 1820 aa18.07■□□□□ 0.48
CAPN12-204ENST00000594552 RTL1A6NKG5 1358 aa18.06■□□□□ 0.48
CAPN12-204ENST00000594552 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
CAPN12-204ENST00000594552 ACSBG1Q96GR2 724 aa18.06■□□□□ 0.48
CAPN12-204ENST00000594552 SPON1Q9HCB6 807 aa18.06■□□□□ 0.48
CAPN12-204ENST00000594552 HOXC9P31274 260 aa18.05■□□□□ 0.48
CAPN12-204ENST00000594552 STK32BQ9NY57 414 aa18.05■□□□□ 0.48
CAPN12-204ENST00000594552 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
CAPN12-204ENST00000594552 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
CAPN12-204ENST00000594552 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
CAPN12-204ENST00000594552 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.48
CAPN12-204ENST00000594552 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms