RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 USP6P35125 1406 aa22.16■■□□□ 1.14
FOXA3-202ENST00000594297 DDB1Q16531 1140 aa22.16■■□□□ 1.14
FOXA3-202ENST00000594297 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
FOXA3-202ENST00000594297 BRD4O60885 1362 aaPredicted RBP22.14■■□□□ 1.14
FOXA3-202ENST00000594297 SRPK2P78362 688 aaKnown RBP22.14■■□□□ 1.13
FOXA3-202ENST00000594297 ZBTB7AO95365 584 aa22.13■■□□□ 1.13
FOXA3-202ENST00000594297 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
FOXA3-202ENST00000594297 TOM1L2Q6ZVM7 507 aa22.12■■□□□ 1.13
FOXA3-202ENST00000594297 BCL9O00512 1426 aa22.12■■□□□ 1.13
FOXA3-202ENST00000594297 CPSF1Q10570 1443 aaKnown RBP22.12■■□□□ 1.13
FOXA3-202ENST00000594297 PTGER2P43116 358 aa22.11■■□□□ 1.13
FOXA3-202ENST00000594297 PROM2Q8N271 834 aa22.11■■□□□ 1.13
FOXA3-202ENST00000594297 MARCH10Q8NA82 808 aaPredicted RBP22.11■■□□□ 1.13
FOXA3-202ENST00000594297 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
FOXA3-202ENST00000594297 WDR17Q8IZU2 1322 aa22.1■■□□□ 1.13
FOXA3-202ENST00000594297 NLRP6P59044 892 aa22.1■■□□□ 1.13
FOXA3-202ENST00000594297 NHSQ6T4R5 1651 aa22.1■■□□□ 1.13
FOXA3-202ENST00000594297 CENPJQ9HC77 1338 aaPredicted RBP22.09■■□□□ 1.13
FOXA3-202ENST00000594297 NBPF1Q3BBV0 1214 aa22.09■■□□□ 1.13
FOXA3-202ENST00000594297 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.13
FOXA3-202ENST00000594297 ZNF784Q8NCA9 323 aaPredicted RBP22.08■■□□□ 1.13
FOXA3-202ENST00000594297 UTRNP46939 3433 aa22.07■■□□□ 1.12
FOXA3-202ENST00000594297 PAPPAQ13219 1627 aa22.07■■□□□ 1.12
FOXA3-202ENST00000594297 TRPM1Q7Z4N2 1603 aa22.07■■□□□ 1.12
FOXA3-202ENST00000594297 ATF5Q9Y2D1 282 aaPredicted RBP22.07■■□□□ 1.12
FOXA3-202ENST00000594297 AXIN2Q9Y2T1 843 aa22.07■■□□□ 1.12
FOXA3-202ENST00000594297 CHD4Q14839 1912 aa22.06■■□□□ 1.12
FOXA3-202ENST00000594297 TNS2Q63HR2 1409 aa22.06■■□□□ 1.12
FOXA3-202ENST00000594297 TXNRD1Q16881 649 aa22.05■■□□□ 1.12
FOXA3-202ENST00000594297 FHDC1Q9C0D6 1143 aaPredicted RBP22.05■■□□□ 1.12
FOXA3-202ENST00000594297 STK32BQ9NY57 414 aa22.05■■□□□ 1.12
FOXA3-202ENST00000594297 CABP1Q9NZU7 370 aa22.05■■□□□ 1.12
FOXA3-202ENST00000594297 NFAT5O94916 1531 aa22.05■■□□□ 1.12
FOXA3-202ENST00000594297 SLC15A2Q16348 729 aa22.03■■□□□ 1.12
FOXA3-202ENST00000594297 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
FOXA3-202ENST00000594297 ABCC6O95255 1503 aa22.02■■□□□ 1.12
FOXA3-202ENST00000594297 SYT17Q9BSW7 474 aa22.02■■□□□ 1.12
FOXA3-202ENST00000594297 ARHGEF25Q86VW2 580 aa22■■□□□ 1.11
FOXA3-202ENST00000594297 SGIP1Q9BQI5 828 aa22■■□□□ 1.11
FOXA3-202ENST00000594297 CARD10Q9BWT7 1032 aa22■■□□□ 1.11
FOXA3-202ENST00000594297 BTAF1O14981 1849 aa21.99■■□□□ 1.11
FOXA3-202ENST00000594297 SOX12O15370 315 aa21.99■■□□□ 1.11
FOXA3-202ENST00000594297 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
FOXA3-202ENST00000594297 CSB-PGBD3P0DP91 1061 aa21.98■■□□□ 1.11
FOXA3-202ENST00000594297 CCDC7Q96M83 1385 aa21.98■■□□□ 1.11
FOXA3-202ENST00000594297 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
FOXA3-202ENST00000594297 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
FOXA3-202ENST00000594297 SENP3-EIF4A1A0A087X0R7 540 aa21.96■■□□□ 1.11
FOXA3-202ENST00000594297 TTC21BQ7Z4L5 1316 aa21.96■■□□□ 1.11
FOXA3-202ENST00000594297 LTN1O94822 1766 aa21.94■■□□□ 1.1
FOXA3-202ENST00000594297 EXOC5O00471 708 aa21.94■■□□□ 1.1
FOXA3-202ENST00000594297 KCNH5Q8NCM2 988 aa21.94■■□□□ 1.1
FOXA3-202ENST00000594297 MAP3K5Q99683 1374 aa21.94■■□□□ 1.1
FOXA3-202ENST00000594297 ZEB1P37275 1124 aaPredicted RBP21.93■■□□□ 1.1
FOXA3-202ENST00000594297 QSER1Q2KHR3 1735 aa21.93■■□□□ 1.1
FOXA3-202ENST00000594297 EVC2Q86UK5 1308 aa21.92■■□□□ 1.1
FOXA3-202ENST00000594297 ACSBG1Q96GR2 724 aa21.92■■□□□ 1.1
FOXA3-202ENST00000594297 TTC21AQ8NDW8 1320 aa21.91■■□□□ 1.1
FOXA3-202ENST00000594297 C1QTNF8P60827 252 aa21.91■■□□□ 1.1
FOXA3-202ENST00000594297 ARXQ96QS3 562 aa21.91■■□□□ 1.1
FOXA3-202ENST00000594297 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
FOXA3-202ENST00000594297 COL24A1Q17RW2 1714 aa21.9■■□□□ 1.1
FOXA3-202ENST00000594297 ZNF827Q17R98 1081 aa21.9■■□□□ 1.1
FOXA3-202ENST00000594297 ERBB3P21860 1342 aa21.87■■□□□ 1.09
FOXA3-202ENST00000594297 NEUROD1Q13562 356 aa21.87■■□□□ 1.09
FOXA3-202ENST00000594297 ZNF692Q9BU19 519 aaPredicted RBP21.87■■□□□ 1.09
FOXA3-202ENST00000594297 KTN1Q86UP2 1357 aaKnown RBP21.87■■□□□ 1.09
FOXA3-202ENST00000594297 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
FOXA3-202ENST00000594297 LRRC4BQ9NT99 713 aa21.84■■□□□ 1.09
FOXA3-202ENST00000594297 TIMELESSQ9UNS1 1208 aa21.84■■□□□ 1.09
FOXA3-202ENST00000594297 IL2RBP14784 551 aa21.82■■□□□ 1.08
FOXA3-202ENST00000594297 GPR162Q16538 588 aa21.82■■□□□ 1.08
FOXA3-202ENST00000594297 SIN3AQ96ST3 1273 aa21.82■■□□□ 1.08
FOXA3-202ENST00000594297 NLRP2Q9NX02 1062 aa21.82■■□□□ 1.08
FOXA3-202ENST00000594297 DOT1LQ8TEK3 1739 aa21.82■■□□□ 1.08
FOXA3-202ENST00000594297 USP31Q70CQ4 1352 aa21.82■■□□□ 1.08
FOXA3-202ENST00000594297 KLHL34Q8N239 644 aa21.81■■□□□ 1.08
FOXA3-202ENST00000594297 CD163L1Q9NR16 1453 aa21.81■■□□□ 1.08
FOXA3-202ENST00000594297 FAM208AQ9UK61 1670 aaKnown RBP21.81■■□□□ 1.08
FOXA3-202ENST00000594297 GOLGB1Q14789 3259 aaKnown RBP21.8■■□□□ 1.08
FOXA3-202ENST00000594297 ROCK2O75116 1388 aaKnown RBP21.79■■□□□ 1.08
FOXA3-202ENST00000594297 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
FOXA3-202ENST00000594297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.79■■□□□ 1.08
FOXA3-202ENST00000594297 AKT1S1Q96B36 256 aa21.79■■□□□ 1.08
FOXA3-202ENST00000594297 LY75O60449 1722 aa21.79■■□□□ 1.08
FOXA3-202ENST00000594297 GIGYF1O75420 1035 aaPredicted RBP21.78■■□□□ 1.08
FOXA3-202ENST00000594297 L3MBTL2Q969R5 705 aa21.78■■□□□ 1.08
FOXA3-202ENST00000594297 PNPLA7Q6ZV29 1317 aa21.78■■□□□ 1.08
FOXA3-202ENST00000594297 SBNO2Q9Y2G9 1366 aa21.77■■□□□ 1.08
FOXA3-202ENST00000594297 KAT6BQ8WYB5 2073 aa21.77■■□□□ 1.08
FOXA3-202ENST00000594297 NME9Q86XW9 330 aa21.77■■□□□ 1.08
FOXA3-202ENST00000594297 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
FOXA3-202ENST00000594297 ANKRD24Q8TF21 1146 aa21.77■■□□□ 1.08
FOXA3-202ENST00000594297 POLD1P28340 1107 aa21.75■■□□□ 1.07
FOXA3-202ENST00000594297 NLGN2Q8NFZ4 835 aa21.75■■□□□ 1.07
FOXA3-202ENST00000594297 SLC16A10Q8TF71 515 aa21.75■■□□□ 1.07
FOXA3-202ENST00000594297 SLC27A3Q5K4L6 730 aa21.73■■□□□ 1.07
FOXA3-202ENST00000594297 KCNQ4P56696 695 aa21.72■■□□□ 1.07
FOXA3-202ENST00000594297 NSD2O96028 1365 aa21.72■■□□□ 1.07
FOXA3-202ENST00000594297 EDC4Q6P2E9 1401 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms