RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 PARP4Q9UKK3 1724 aaKnown RBP23.26■■□□□ 1.31
SYMPK-204ENST00000593959 PDE3BQ13370 1112 aa23.26■■□□□ 1.31
SYMPK-204ENST00000593959 HDGFL2Q7Z4V5 671 aaPredicted RBP23.26■■□□□ 1.31
SYMPK-204ENST00000593959 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
SYMPK-204ENST00000593959 NINLQ9Y2I6 1382 aa23.26■■□□□ 1.31
SYMPK-204ENST00000593959 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
SYMPK-204ENST00000593959 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
SYMPK-204ENST00000593959 A0A1W2PP64 1363 aa23.25■■□□□ 1.31
SYMPK-204ENST00000593959 TNS1Q9HBL0 1735 aaKnown RBP23.25■■□□□ 1.31
SYMPK-204ENST00000593959 EN1Q05925 392 aaPredicted RBP23.24■■□□□ 1.31
SYMPK-204ENST00000593959 NME9Q86XW9 330 aa23.24■■□□□ 1.31
SYMPK-204ENST00000593959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.24■■□□□ 1.31
SYMPK-204ENST00000593959 ZBTB7CA1YPR0 619 aa23.23■■□□□ 1.31
SYMPK-204ENST00000593959 C11orf95C9JLR9 678 aaPredicted RBP23.23■■□□□ 1.31
SYMPK-204ENST00000593959 TRIM37O94972 964 aa23.23■■□□□ 1.31
SYMPK-204ENST00000593959 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
SYMPK-204ENST00000593959 CAMKK2Q96RR4 588 aa23.22■■□□□ 1.31
SYMPK-204ENST00000593959 CARD10Q9BWT7 1032 aa23.22■■□□□ 1.31
SYMPK-204ENST00000593959 CDCA7Q9BWT1 371 aaPredicted RBP23.21■■□□□ 1.31
SYMPK-204ENST00000593959 PARD3Q8TEW0 1356 aa23.2■■□□□ 1.3
SYMPK-204ENST00000593959 OVOS2A0A0J9YW53 1432 aa23.19■■□□□ 1.3
SYMPK-204ENST00000593959 OVOS2Q6IE36 1432 aa23.19■■□□□ 1.3
SYMPK-204ENST00000593959 SOX12O15370 315 aa23.19■■□□□ 1.3
SYMPK-204ENST00000593959 USP47Q96K76 1375 aa23.18■■□□□ 1.3
SYMPK-204ENST00000593959 BCL9O00512 1426 aa23.17■■□□□ 1.3
SYMPK-204ENST00000593959 PEAK1Q9H792 1746 aa23.17■■□□□ 1.3
SYMPK-204ENST00000593959 LRRC37A3O60309 1634 aa23.16■■□□□ 1.3
SYMPK-204ENST00000593959 APBA3O96018 575 aa23.16■■□□□ 1.3
SYMPK-204ENST00000593959 EZH2Q15910 746 aaKnown RBP23.16■■□□□ 1.3
SYMPK-204ENST00000593959 DDB1Q16531 1140 aa23.16■■□□□ 1.3
SYMPK-204ENST00000593959 OVOS2A0A0G2JMS6 1433 aa23.16■■□□□ 1.3
SYMPK-204ENST00000593959 RGPD5Q99666 1765 aa23.15■■□□□ 1.3
SYMPK-204ENST00000593959 CCDC7Q96M83 1385 aa23.14■■□□□ 1.3
SYMPK-204ENST00000593959 ERBB3P21860 1342 aa23.14■■□□□ 1.3
SYMPK-204ENST00000593959 ANKRD36BQ8N2N9 1353 aa23.14■■□□□ 1.29
SYMPK-204ENST00000593959 TMF1P82094 1093 aa23.13■■□□□ 1.29
SYMPK-204ENST00000593959 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
SYMPK-204ENST00000593959 MARCH10Q8NA82 808 aaPredicted RBP23.12■■□□□ 1.29
SYMPK-204ENST00000593959 WNK3Q9BYP7 1800 aa23.12■■□□□ 1.29
SYMPK-204ENST00000593959 PSDA5PKW4 1024 aaPredicted RBP23.09■■□□□ 1.29
SYMPK-204ENST00000593959 IP6K1Q92551 441 aa23.09■■□□□ 1.29
SYMPK-204ENST00000593959 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
SYMPK-204ENST00000593959 BCL11BQ9C0K0 894 aaPredicted RBP23.08■■□□□ 1.29
SYMPK-204ENST00000593959 LRP5O75197 1615 aa23.08■■□□□ 1.28
SYMPK-204ENST00000593959 LTN1O94822 1766 aa23.07■■□□□ 1.28
SYMPK-204ENST00000593959 RREB1Q92766 1687 aa23.07■■□□□ 1.28
SYMPK-204ENST00000593959 PLSCR1O15162 318 aa23.07■■□□□ 1.28
SYMPK-204ENST00000593959 EXOC5O00471 708 aa23.06■■□□□ 1.28
SYMPK-204ENST00000593959 R3HDM1Q15032 1099 aaKnown RBP23.06■■□□□ 1.28
SYMPK-204ENST00000593959 ANKRD24Q8TF21 1146 aa23.06■■□□□ 1.28
SYMPK-204ENST00000593959 COG3Q96JB2 828 aa23.06■■□□□ 1.28
SYMPK-204ENST00000593959 SBF2Q86WG5 1849 aa23.05■■□□□ 1.28
SYMPK-204ENST00000593959 FYB1O15117 783 aa23.05■■□□□ 1.28
SYMPK-204ENST00000593959 TNS2Q63HR2 1409 aa23.05■■□□□ 1.28
SYMPK-204ENST00000593959 NLRP2Q9NX02 1062 aa23.04■■□□□ 1.28
SYMPK-204ENST00000593959 PTF1AQ7RTS3 328 aa23.03■■□□□ 1.28
SYMPK-204ENST00000593959 MAP3K19Q56UN5 1328 aa23.03■■□□□ 1.28
SYMPK-204ENST00000593959 RGPD3A6NKT7 1758 aaPredicted RBP23.02■■□□□ 1.28
SYMPK-204ENST00000593959 RGPD4Q7Z3J3 1758 aa23.02■■□□□ 1.28
SYMPK-204ENST00000593959 IL2RBP14784 551 aa23.02■■□□□ 1.28
SYMPK-204ENST00000593959 ZEB1P37275 1124 aaPredicted RBP23.02■■□□□ 1.28
SYMPK-204ENST00000593959 NUP188Q5SRE5 1749 aa23.01■■□□□ 1.27
SYMPK-204ENST00000593959 HOXC9P31274 260 aa23■■□□□ 1.27
SYMPK-204ENST00000593959 FBLN1P23142 703 aa22.98■■□□□ 1.27
SYMPK-204ENST00000593959 NBPF14Q5TI25 921 aa22.98■■□□□ 1.27
SYMPK-204ENST00000593959 PROM2Q8N271 834 aa22.98■■□□□ 1.27
SYMPK-204ENST00000593959 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
SYMPK-204ENST00000593959 RTL1A6NKG5 1358 aa22.98■■□□□ 1.27
SYMPK-204ENST00000593959 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
SYMPK-204ENST00000593959 FAM208AQ9UK61 1670 aaKnown RBP22.95■■□□□ 1.26
SYMPK-204ENST00000593959 MYOM1P52179 1685 aa22.94■■□□□ 1.26
SYMPK-204ENST00000593959 AMPHP49418 695 aa22.94■■□□□ 1.26
SYMPK-204ENST00000593959 KIF24Q5T7B8 1368 aa22.93■■□□□ 1.26
SYMPK-204ENST00000593959 KCNQ2O43526 872 aa22.93■■□□□ 1.26
SYMPK-204ENST00000593959 RRS1Q15050 365 aaKnown RBP22.91■■□□□ 1.26
SYMPK-204ENST00000593959 LTV1Q96GA3 475 aaPredicted RBP22.91■■□□□ 1.26
SYMPK-204ENST00000593959 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
SYMPK-204ENST00000593959 TXNRD1Q16881 649 aa22.89■■□□□ 1.25
SYMPK-204ENST00000593959 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.25
SYMPK-204ENST00000593959 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
SYMPK-204ENST00000593959 INSRP06213 1382 aa22.89■■□□□ 1.25
SYMPK-204ENST00000593959 NBPF6Q5VWK0 638 aa22.88■■□□□ 1.25
SYMPK-204ENST00000593959 NBPF4Q96M43 638 aa22.88■■□□□ 1.25
SYMPK-204ENST00000593959 NSD3Q9BZ95 1437 aa22.88■■□□□ 1.25
SYMPK-204ENST00000593959 EIF4G2P78344 907 aaKnown RBP eCLIP22.87■■□□□ 1.25
SYMPK-204ENST00000593959 KIF20BQ96Q89 1820 aa22.86■■□□□ 1.25
SYMPK-204ENST00000593959 FLT4P35916 1363 aa22.86■■□□□ 1.25
SYMPK-204ENST00000593959 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
SYMPK-204ENST00000593959 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
SYMPK-204ENST00000593959 CGNL1Q0VF96 1302 aa22.84■■□□□ 1.25
SYMPK-204ENST00000593959 MEGF6O75095 1541 aa22.84■■□□□ 1.25
SYMPK-204ENST00000593959 HSPA5P11021 654 aaKnown RBP22.84■■□□□ 1.25
SYMPK-204ENST00000593959 ZCRB1Q8TBF4 217 aaKnown RBP22.83■■□□□ 1.25
SYMPK-204ENST00000593959 DDX54Q8TDD1 881 aaKnown RBP22.82■■□□□ 1.24
SYMPK-204ENST00000593959 RGPD2P0DJD1 1756 aa22.81■■□□□ 1.24
SYMPK-204ENST00000593959 SMG6Q86US8 1419 aaKnown RBP22.81■■□□□ 1.24
SYMPK-204ENST00000593959 SLC15A2Q16348 729 aa22.8■■□□□ 1.24
SYMPK-204ENST00000593959 SPON1Q9HCB6 807 aa22.8■■□□□ 1.24
SYMPK-204ENST00000593959 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
SYMPK-204ENST00000593959 CASZ1Q86V15 1759 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms