RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 EN1Q05925 392 aaPredicted RBP18.82■□□□□ 0.6
APOC1-209ENST00000592885 ARHGEF25Q86VW2 580 aa18.82■□□□□ 0.6
APOC1-209ENST00000592885 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
APOC1-209ENST00000592885 ZBTB7CA1YPR0 619 aa18.81■□□□□ 0.6
APOC1-209ENST00000592885 OVOS2A0A0G2JMS6 1433 aa18.81■□□□□ 0.6
APOC1-209ENST00000592885 OVOS2A0A0J9YW53 1432 aa18.81■□□□□ 0.6
APOC1-209ENST00000592885 OVOS2Q6IE36 1432 aa18.81■□□□□ 0.6
APOC1-209ENST00000592885 EDC4Q6P2E9 1401 aaKnown RBP18.81■□□□□ 0.6
APOC1-209ENST00000592885 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
APOC1-209ENST00000592885 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
APOC1-209ENST00000592885 NINLQ9Y2I6 1382 aa18.81■□□□□ 0.6
APOC1-209ENST00000592885 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
APOC1-209ENST00000592885 TRIM37O94972 964 aa18.8■□□□□ 0.6
APOC1-209ENST00000592885 TOM1L2Q6ZVM7 507 aa18.79■□□□□ 0.6
APOC1-209ENST00000592885 HDGFL2Q7Z4V5 671 aaPredicted RBP18.79■□□□□ 0.6
APOC1-209ENST00000592885 CDCA7Q9BWT1 371 aaPredicted RBP18.79■□□□□ 0.6
APOC1-209ENST00000592885 NUP188Q5SRE5 1749 aa18.78■□□□□ 0.6
APOC1-209ENST00000592885 LTN1O94822 1766 aa18.78■□□□□ 0.6
APOC1-209ENST00000592885 SBF2Q86WG5 1849 aa18.77■□□□□ 0.6
APOC1-209ENST00000592885 CAMKK2Q96RR4 588 aa18.77■□□□□ 0.6
APOC1-209ENST00000592885 APBA3O96018 575 aa18.76■□□□□ 0.59
APOC1-209ENST00000592885 EZH2Q15910 746 aaKnown RBP18.76■□□□□ 0.59
APOC1-209ENST00000592885 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
APOC1-209ENST00000592885 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
APOC1-209ENST00000592885 SRCAPQ6ZRS2 3230 aa18.76■□□□□ 0.59
APOC1-209ENST00000592885 A0A1W2PP64 1363 aa18.76■□□□□ 0.59
APOC1-209ENST00000592885 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
APOC1-209ENST00000592885 BCL9O00512 1426 aa18.75■□□□□ 0.59
APOC1-209ENST00000592885 DDB1Q16531 1140 aa18.75■□□□□ 0.59
APOC1-209ENST00000592885 TMC1Q8TDI8 760 aa18.75■□□□□ 0.59
APOC1-209ENST00000592885 CARD10Q9BWT7 1032 aa18.75■□□□□ 0.59
APOC1-209ENST00000592885 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
APOC1-209ENST00000592885 SOX12O15370 315 aa18.73■□□□□ 0.59
APOC1-209ENST00000592885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.73■□□□□ 0.59
APOC1-209ENST00000592885 TESK2Q96S53 571 aa18.73■□□□□ 0.59
APOC1-209ENST00000592885 FAM208AQ9UK61 1670 aaKnown RBP18.73■□□□□ 0.59
APOC1-209ENST00000592885 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
APOC1-209ENST00000592885 SLC12A5Q9H2X9 1139 aa18.72■□□□□ 0.59
APOC1-209ENST00000592885 NME9Q86XW9 330 aa18.71■□□□□ 0.59
APOC1-209ENST00000592885 TNS2Q63HR2 1409 aa18.71■□□□□ 0.59
APOC1-209ENST00000592885 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
APOC1-209ENST00000592885 R3HDM1Q15032 1099 aaKnown RBP18.7■□□□□ 0.58
APOC1-209ENST00000592885 ERBB3P21860 1342 aa18.7■□□□□ 0.58
APOC1-209ENST00000592885 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
APOC1-209ENST00000592885 USP47Q96K76 1375 aa18.68■□□□□ 0.58
APOC1-209ENST00000592885 NBPF14Q5TI25 921 aa18.67■□□□□ 0.58
APOC1-209ENST00000592885 PLSCR1O15162 318 aa18.66■□□□□ 0.58
APOC1-209ENST00000592885 BCL11BQ9C0K0 894 aaPredicted RBP18.66■□□□□ 0.58
APOC1-209ENST00000592885 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
APOC1-209ENST00000592885 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
APOC1-209ENST00000592885 MARCH10Q8NA82 808 aaPredicted RBP18.65■□□□□ 0.58
APOC1-209ENST00000592885 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
APOC1-209ENST00000592885 EXOC5O00471 708 aa18.64■□□□□ 0.57
APOC1-209ENST00000592885 TMF1P82094 1093 aa18.64■□□□□ 0.57
APOC1-209ENST00000592885 ANKRD24Q8TF21 1146 aa18.62■□□□□ 0.57
APOC1-209ENST00000592885 COG3Q96JB2 828 aa18.62■□□□□ 0.57
APOC1-209ENST00000592885 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
APOC1-209ENST00000592885 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
APOC1-209ENST00000592885 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
APOC1-209ENST00000592885 RTL1A6NKG5 1358 aa18.6■□□□□ 0.57
APOC1-209ENST00000592885 IL2RBP14784 551 aa18.6■□□□□ 0.57
APOC1-209ENST00000592885 IP6K1Q92551 441 aa18.6■□□□□ 0.57
APOC1-209ENST00000592885 MYOM1P52179 1685 aa18.6■□□□□ 0.57
APOC1-209ENST00000592885 CASZ1Q86V15 1759 aa18.58■□□□□ 0.56
APOC1-209ENST00000592885 MAP3K19Q56UN5 1328 aa18.55■□□□□ 0.56
APOC1-209ENST00000592885 BTAF1O14981 1849 aa18.54■□□□□ 0.56
APOC1-209ENST00000592885 HOXC9P31274 260 aa18.54■□□□□ 0.56
APOC1-209ENST00000592885 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
APOC1-209ENST00000592885 KIF24Q5T7B8 1368 aa18.53■□□□□ 0.56
APOC1-209ENST00000592885 SMG6Q86US8 1419 aaKnown RBP18.52■□□□□ 0.56
APOC1-209ENST00000592885 FYB1O15117 783 aa18.52■□□□□ 0.56
APOC1-209ENST00000592885 AMPHP49418 695 aa18.52■□□□□ 0.56
APOC1-209ENST00000592885 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
APOC1-209ENST00000592885 RGPD2P0DJD1 1756 aa18.52■□□□□ 0.55
APOC1-209ENST00000592885 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
APOC1-209ENST00000592885 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.55
APOC1-209ENST00000592885 TXNRD1Q16881 649 aa18.51■□□□□ 0.55
APOC1-209ENST00000592885 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
APOC1-209ENST00000592885 KCNQ2O43526 872 aa18.5■□□□□ 0.55
APOC1-209ENST00000592885 PROM2Q8N271 834 aa18.5■□□□□ 0.55
APOC1-209ENST00000592885 ANKRD26Q9UPS8 1709 aa18.49■□□□□ 0.55
APOC1-209ENST00000592885 LTV1Q96GA3 475 aaPredicted RBP18.49■□□□□ 0.55
APOC1-209ENST00000592885 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
APOC1-209ENST00000592885 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
APOC1-209ENST00000592885 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
APOC1-209ENST00000592885 NSD3Q9BZ95 1437 aa18.48■□□□□ 0.55
APOC1-209ENST00000592885 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
APOC1-209ENST00000592885 INSRP06213 1382 aa18.47■□□□□ 0.55
APOC1-209ENST00000592885 FLT4P35916 1363 aa18.47■□□□□ 0.55
APOC1-209ENST00000592885 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
APOC1-209ENST00000592885 MEGF6O75095 1541 aa18.47■□□□□ 0.55
APOC1-209ENST00000592885 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
APOC1-209ENST00000592885 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
APOC1-209ENST00000592885 SLC15A2Q16348 729 aa18.45■□□□□ 0.54
APOC1-209ENST00000592885 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
APOC1-209ENST00000592885 PPP1R1BQ9UD71 204 aaPredicted RBP18.45■□□□□ 0.54
APOC1-209ENST00000592885 FBLN1P23142 703 aa18.44■□□□□ 0.54
APOC1-209ENST00000592885 LY75O60449 1722 aa18.43■□□□□ 0.54
APOC1-209ENST00000592885 KAT6BQ8WYB5 2073 aa18.43■□□□□ 0.54
APOC1-209ENST00000592885 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms