RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 ATAD2Q6PL18 1390 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 FAM135AQ9P2D6 1515 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
DNMT1-228ENST00000592705 ZNF652Q9Y2D9 606 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 TMOD3Q9NYL9 352 aa15.28■□□□□ 0.04
DNMT1-228ENST00000592705 ASXL2Q76L83 1435 aa15.28■□□□□ 0.04
DNMT1-228ENST00000592705 GNAI2P04899 355 aa15.28■□□□□ 0.04
DNMT1-228ENST00000592705 PSMA5P28066 241 aa15.28■□□□□ 0.04
DNMT1-228ENST00000592705 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
DNMT1-228ENST00000592705 CPLX1O14810 134 aa15.27■□□□□ 0.04
DNMT1-228ENST00000592705 PRPF40AO75400 957 aaKnown RBP15.27■□□□□ 0.03
DNMT1-228ENST00000592705 MCM4P33991 863 aa15.27■□□□□ 0.03
DNMT1-228ENST00000592705 NEUROD6Q96NK8 337 aa15.27■□□□□ 0.03
DNMT1-228ENST00000592705 FCHSD2O94868 740 aa15.27■□□□□ 0.03
DNMT1-228ENST00000592705 TRIM29Q14134 588 aa15.27■□□□□ 0.03
DNMT1-228ENST00000592705 C20orf194Q5TEA3 1177 aa15.27■□□□□ 0.03
DNMT1-228ENST00000592705 TPM2P07951 284 aa15.26■□□□□ 0.03
DNMT1-228ENST00000592705 CCT4P50991 539 aaKnown RBP15.26■□□□□ 0.03
DNMT1-228ENST00000592705 TRDNQ13061 729 aa15.26■□□□□ 0.03
DNMT1-228ENST00000592705 BICDL1Q6ZP65 573 aa15.26■□□□□ 0.03
DNMT1-228ENST00000592705 TPD52L1Q16890 204 aaPredicted RBP15.26■□□□□ 0.03
DNMT1-228ENST00000592705 CREBRFQ8IUR6 639 aa15.26■□□□□ 0.03
DNMT1-228ENST00000592705 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
DNMT1-228ENST00000592705 NPHP3Q7Z494 1330 aa15.26■□□□□ 0.03
DNMT1-228ENST00000592705 IDI1Q13907 227 aa15.25■□□□□ 0.03
DNMT1-228ENST00000592705 CLASRPQ8N2M8 674 aaKnown RBP15.25■□□□□ 0.03
DNMT1-228ENST00000592705 TSPY26PQ9H489 355 aa15.25■□□□□ 0.03
DNMT1-228ENST00000592705 SURF6O75683 361 aaKnown RBP15.25■□□□□ 0.03
DNMT1-228ENST00000592705 CCDC73Q6ZRK6 1079 aa15.25■□□□□ 0.03
DNMT1-228ENST00000592705 MTERF4Q7Z6M4 381 aaKnown RBP15.25■□□□□ 0.03
DNMT1-228ENST00000592705 GRPEL1Q9HAV7 217 aa15.25■□□□□ 0.03
DNMT1-228ENST00000592705 IKQ13123 557 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-228ENST00000592705 MAP7D2Q96T17 732 aa15.25■□□□□ 0.03
DNMT1-228ENST00000592705 TPM1P09493 284 aa15.25■□□□□ 0.03
DNMT1-228ENST00000592705 TNNT3P45378 269 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-228ENST00000592705 CCDC43Q96MW1 224 aaKnown RBP15.25■□□□□ 0.03
DNMT1-228ENST00000592705 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
DNMT1-228ENST00000592705 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
DNMT1-228ENST00000592705 SULT6B1Q6IMI4 303 aa15.24■□□□□ 0.03
DNMT1-228ENST00000592705 R3HCC1Q9Y3T6 440 aaKnown RBP15.24■□□□□ 0.03
DNMT1-228ENST00000592705 RBM5P52756 815 aaKnown RBP eCLIP15.24■□□□□ 0.031e-7■■■■■ 35.1
DNMT1-228ENST00000592705 SLC4A2P04920 1241 aa15.24■□□□□ 0.03
DNMT1-228ENST00000592705 RNF214Q8ND24 703 aa15.24■□□□□ 0.03
DNMT1-228ENST00000592705 AK7Q96M32 723 aa15.24■□□□□ 0.03
DNMT1-228ENST00000592705 CNNM1Q9NRU3 951 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
DNMT1-228ENST00000592705 HIP1O00291 1037 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 POLD1P28340 1107 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 TSR1Q2NL82 804 aaKnown RBP15.23■□□□□ 0.03
DNMT1-228ENST00000592705 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 ERICH2A1L162 156 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 DUSP27Q5VZP5 1158 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 MPHOSPH8Q99549 860 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
DNMT1-228ENST00000592705 TBC1D2BQ9UPU7 963 aa15.22■□□□□ 0.03
DNMT1-228ENST00000592705 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
DNMT1-228ENST00000592705 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
DNMT1-228ENST00000592705 LRRC59Q96AG4 307 aaKnown RBP15.22■□□□□ 0.03
DNMT1-228ENST00000592705 LRRCC1Q9C099 1032 aa15.22■□□□□ 0.03
DNMT1-228ENST00000592705 TMEM57Q8N5G2 664 aa15.22■□□□□ 0.03
DNMT1-228ENST00000592705 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
DNMT1-228ENST00000592705 FYB1O15117 783 aa15.21■□□□□ 0.03
DNMT1-228ENST00000592705 PDCP20941 246 aa15.21■□□□□ 0.03
DNMT1-228ENST00000592705 ERC1Q8IUD2 1116 aa15.21■□□□□ 0.03
DNMT1-228ENST00000592705 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
DNMT1-228ENST00000592705 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.03
DNMT1-228ENST00000592705 NFE2L2Q16236 605 aa15.21■□□□□ 0.02
DNMT1-228ENST00000592705 GPS2Q13227 327 aa15.2■□□□□ 0.02
DNMT1-228ENST00000592705 FSD1Q9BTV5 496 aa15.2■□□□□ 0.02
DNMT1-228ENST00000592705 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
DNMT1-228ENST00000592705 SRCIN1Q9C0H9 1055 aa15.2■□□□□ 0.02
DNMT1-228ENST00000592705 SCAF11Q99590 1463 aaKnown RBP15.2■□□□□ 0.02
DNMT1-228ENST00000592705 AMER1Q5JTC6 1135 aaPredicted RBP15.2■□□□□ 0.02
DNMT1-228ENST00000592705 NAT10Q9H0A0 1025 aaKnown RBP15.2■□□□□ 0.02
DNMT1-228ENST00000592705 PRM3Q9NNZ6 103 aa15.2■□□□□ 0.02
DNMT1-228ENST00000592705 RALGAPBQ86X10 1494 aa15.19■□□□□ 0.02
DNMT1-228ENST00000592705 C16orf71Q8IYS4 520 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-228ENST00000592705 HOMER1Q86YM7 354 aa15.19■□□□□ 0.02
DNMT1-228ENST00000592705 WDR33Q9C0J8 1336 aaKnown RBP15.19■□□□□ 0.02
DNMT1-228ENST00000592705 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-228ENST00000592705 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
DNMT1-228ENST00000592705 MPRIPQ6WCQ1 1025 aa15.19■□□□□ 0.02
DNMT1-228ENST00000592705 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
DNMT1-228ENST00000592705 PES1O00541 588 aaKnown RBP15.18■□□□□ 0.02
DNMT1-228ENST00000592705 WASHC4Q2M389 1173 aa15.18■□□□□ 0.02
DNMT1-228ENST00000592705 PTCD1O75127 700 aaKnown RBP15.18■□□□□ 0.02
DNMT1-228ENST00000592705 ZNF771Q7L3S4 317 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-228ENST00000592705 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
DNMT1-228ENST00000592705 DISP3Q9P2K9 1392 aa15.17■□□□□ 0.02
DNMT1-228ENST00000592705 SKAP1Q86WV1 359 aa15.17■□□□□ 0.02
DNMT1-228ENST00000592705 UHRF1BP1Q6BDS2 1440 aa15.17■□□□□ 0.02
DNMT1-228ENST00000592705 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
DNMT1-228ENST00000592705 ANKRD20A12PQ8NF67 263 aa15.17■□□□□ 0.02
DNMT1-228ENST00000592705 DHX29Q7Z478 1369 aaKnown RBP15.17■□□□□ 0.02
DNMT1-228ENST00000592705 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
DNMT1-228ENST00000592705 RALYLQ86SE5 291 aaKnown RBP15.17■□□□□ 0.02
DNMT1-228ENST00000592705 SLC3A2P08195 630 aaKnown RBP15.16■□□□□ 0.02
DNMT1-228ENST00000592705 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms