RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 COL5A2P05997 1499 aaPredicted RBP22.84■■□□□ 1.25
GCDH-213ENST00000590627 MYOM1P52179 1685 aa22.84■■□□□ 1.25
GCDH-213ENST00000590627 SLIT3O75094 1523 aa22.83■■□□□ 1.25
GCDH-213ENST00000590627 SLC12A5Q9H2X9 1139 aa22.83■■□□□ 1.25
GCDH-213ENST00000590627 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
GCDH-213ENST00000590627 APBA3O96018 575 aa22.81■■□□□ 1.24
GCDH-213ENST00000590627 NLRP6P59044 892 aa22.81■■□□□ 1.24
GCDH-213ENST00000590627 TMC1Q8TDI8 760 aa22.81■■□□□ 1.24
GCDH-213ENST00000590627 CRB1P82279 1406 aa22.81■■□□□ 1.24
GCDH-213ENST00000590627 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
GCDH-213ENST00000590627 R3HDM1Q15032 1099 aaKnown RBP22.8■■□□□ 1.24
GCDH-213ENST00000590627 PANK3Q9H999 370 aa22.79■■□□□ 1.24
GCDH-213ENST00000590627 ANKRD36BQ8N2N9 1353 aa22.78■■□□□ 1.24
GCDH-213ENST00000590627 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
GCDH-213ENST00000590627 ZNF692Q9BU19 519 aaPredicted RBP22.78■■□□□ 1.24
GCDH-213ENST00000590627 RREB1Q92766 1687 aa22.77■■□□□ 1.24
GCDH-213ENST00000590627 TERF2IPQ9NYB0 399 aa22.77■■□□□ 1.24
GCDH-213ENST00000590627 CD163L1Q9NR16 1453 aa22.77■■□□□ 1.24
GCDH-213ENST00000590627 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
GCDH-213ENST00000590627 COL18A1P39060 1754 aa22.75■■□□□ 1.23
GCDH-213ENST00000590627 AKAP12Q02952 1782 aa22.75■■□□□ 1.23
GCDH-213ENST00000590627 PER1O15534 1290 aaPredicted RBP22.74■■□□□ 1.23
GCDH-213ENST00000590627 HDGFL2Q7Z4V5 671 aaPredicted RBP22.74■■□□□ 1.23
GCDH-213ENST00000590627 ZBTB7CA1YPR0 619 aa22.73■■□□□ 1.23
GCDH-213ENST00000590627 TTC21BQ7Z4L5 1316 aa22.73■■□□□ 1.23
GCDH-213ENST00000590627 A0A1W2PP64 1363 aa22.73■■□□□ 1.23
GCDH-213ENST00000590627 NUP188Q5SRE5 1749 aa22.72■■□□□ 1.23
GCDH-213ENST00000590627 KCNH5Q8NCM2 988 aa22.72■■□□□ 1.23
GCDH-213ENST00000590627 CARD14Q9BXL6 1004 aa22.72■■□□□ 1.23
GCDH-213ENST00000590627 TTC21AQ8NDW8 1320 aa22.72■■□□□ 1.23
GCDH-213ENST00000590627 OVOS2A0A0G2JMS6 1433 aa22.72■■□□□ 1.23
GCDH-213ENST00000590627 OVOS2A0A0J9YW53 1432 aa22.72■■□□□ 1.23
GCDH-213ENST00000590627 OVOS2Q6IE36 1432 aa22.72■■□□□ 1.23
GCDH-213ENST00000590627 TOM1L2Q6ZVM7 507 aa22.71■■□□□ 1.23
GCDH-213ENST00000590627 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
GCDH-213ENST00000590627 LRRC37A3O60309 1634 aa22.71■■□□□ 1.23
GCDH-213ENST00000590627 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
GCDH-213ENST00000590627 ARHGEF25Q86VW2 580 aa22.7■■□□□ 1.22
GCDH-213ENST00000590627 DDB1Q16531 1140 aa22.69■■□□□ 1.22
GCDH-213ENST00000590627 NBPF14Q5TI25 921 aa22.69■■□□□ 1.22
GCDH-213ENST00000590627 DIEXFQ68CQ4 756 aaKnown RBP22.69■■□□□ 1.22
GCDH-213ENST00000590627 AXIN2Q9Y2T1 843 aa22.69■■□□□ 1.22
GCDH-213ENST00000590627 WNK3Q9BYP7 1800 aa22.68■■□□□ 1.22
GCDH-213ENST00000590627 CDCA7Q9BWT1 371 aaPredicted RBP22.68■■□□□ 1.22
GCDH-213ENST00000590627 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
GCDH-213ENST00000590627 KNSTRNQ9Y448 316 aa22.67■■□□□ 1.22
GCDH-213ENST00000590627 RGPD3A6NKT7 1758 aaPredicted RBP22.67■■□□□ 1.22
GCDH-213ENST00000590627 RGPD4Q7Z3J3 1758 aa22.67■■□□□ 1.22
GCDH-213ENST00000590627 NSD3Q9BZ95 1437 aa22.66■■□□□ 1.22
GCDH-213ENST00000590627 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
GCDH-213ENST00000590627 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
GCDH-213ENST00000590627 MON2Q7Z3U7 1717 aa22.65■■□□□ 1.22
GCDH-213ENST00000590627 NPC1L1Q9UHC9 1359 aa22.65■■□□□ 1.22
GCDH-213ENST00000590627 ABCC6O95255 1503 aa22.65■■□□□ 1.22
GCDH-213ENST00000590627 RGPD5Q99666 1765 aa22.65■■□□□ 1.22
GCDH-213ENST00000590627 NFAT5O94916 1531 aa22.64■■□□□ 1.21
GCDH-213ENST00000590627 PLSCR1O15162 318 aa22.64■■□□□ 1.21
GCDH-213ENST00000590627 AMER1Q5JTC6 1135 aaPredicted RBP22.64■■□□□ 1.21
GCDH-213ENST00000590627 BCL9O00512 1426 aa22.64■■□□□ 1.21
GCDH-213ENST00000590627 CARD10Q9BWT7 1032 aa22.63■■□□□ 1.21
GCDH-213ENST00000590627 CGNL1Q0VF96 1302 aa22.61■■□□□ 1.21
GCDH-213ENST00000590627 BCL11BQ9C0K0 894 aaPredicted RBP22.61■■□□□ 1.21
GCDH-213ENST00000590627 USP54Q70EL1 1684 aa22.61■■□□□ 1.21
GCDH-213ENST00000590627 USP31Q70CQ4 1352 aa22.61■■□□□ 1.21
GCDH-213ENST00000590627 SOX12O15370 315 aa22.6■■□□□ 1.21
GCDH-213ENST00000590627 CSB-PGBD3P0DP91 1061 aa22.6■■□□□ 1.21
GCDH-213ENST00000590627 MARCH10Q8NA82 808 aaPredicted RBP22.59■■□□□ 1.21
GCDH-213ENST00000590627 NSD2O96028 1365 aa22.59■■□□□ 1.21
GCDH-213ENST00000590627 FYB1O15117 783 aa22.57■■□□□ 1.2
GCDH-213ENST00000590627 EXOC5O00471 708 aa22.56■■□□□ 1.2
GCDH-213ENST00000590627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.55■■□□□ 1.2
GCDH-213ENST00000590627 SPON1Q9HCB6 807 aa22.55■■□□□ 1.2
GCDH-213ENST00000590627 ANP32CO43423 234 aa22.54■■□□□ 1.2
GCDH-213ENST00000590627 KCNQ2O43526 872 aa22.53■■□□□ 1.2
GCDH-213ENST00000590627 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
GCDH-213ENST00000590627 PTF1AQ7RTS3 328 aa22.53■■□□□ 1.2
GCDH-213ENST00000590627 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
GCDH-213ENST00000590627 TNS2Q63HR2 1409 aa22.53■■□□□ 1.2
GCDH-213ENST00000590627 ERBB3P21860 1342 aa22.53■■□□□ 1.2
GCDH-213ENST00000590627 RALBP1Q15311 655 aa22.52■■□□□ 1.2
GCDH-213ENST00000590627 NME9Q86XW9 330 aa22.52■■□□□ 1.2
GCDH-213ENST00000590627 LTN1O94822 1766 aa22.52■■□□□ 1.2
GCDH-213ENST00000590627 PROM2Q8N271 834 aa22.5■■□□□ 1.19
GCDH-213ENST00000590627 ANO8Q9HCE9 1232 aaPredicted RBP22.5■■□□□ 1.19
GCDH-213ENST00000590627 GGNBP2Q9H3C7 697 aa22.49■■□□□ 1.19
GCDH-213ENST00000590627 PPP1R1BQ9UD71 204 aaPredicted RBP22.49■■□□□ 1.19
GCDH-213ENST00000590627 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
GCDH-213ENST00000590627 KIF20BQ96Q89 1820 aa22.48■■□□□ 1.19
GCDH-213ENST00000590627 NLRP2Q9NX02 1062 aa22.47■■□□□ 1.19
GCDH-213ENST00000590627 NHSQ6T4R5 1651 aa22.46■■□□□ 1.19
GCDH-213ENST00000590627 TXNRD1Q16881 649 aa22.46■■□□□ 1.19
GCDH-213ENST00000590627 MORC1Q86VD1 984 aa22.46■■□□□ 1.19
GCDH-213ENST00000590627 COG3Q96JB2 828 aa22.46■■□□□ 1.19
GCDH-213ENST00000590627 ANKRD26Q9UPS8 1709 aa22.45■■□□□ 1.19
GCDH-213ENST00000590627 IL2RBP14784 551 aa22.45■■□□□ 1.18
GCDH-213ENST00000590627 ANKRD24Q8TF21 1146 aa22.44■■□□□ 1.18
GCDH-213ENST00000590627 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
GCDH-213ENST00000590627 MIER1Q8N108 512 aa22.43■■□□□ 1.18
GCDH-213ENST00000590627 STK32BQ9NY57 414 aa22.42■■□□□ 1.18
GCDH-213ENST00000590627 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms