RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 NEMFO60524 1076 aa17.32■□□□□ 0.36
SMARCA4-214ENST00000589677 LTV1Q96GA3 475 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-214ENST00000589677 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-214ENST00000589677 GNAI2P04899 355 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 SSFA2P28290 1259 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 PLEKHH1Q9ULM0 1364 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 C1orf141Q5JVX7 400 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 FAM107BQ9H098 131 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 ZNF644Q9H582 1327 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 SMTNL1A8MU46 457 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 GIMAP7Q8NHV1 300 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 CCDC102AQ96A19 550 aa17.31■□□□□ 0.36
SMARCA4-214ENST00000589677 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 TNNT1P13805 278 aa17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 IQCEQ6IPM2 695 aa17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 UPF3BQ9BZI7 483 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 HS1BP3Q53T59 392 aa17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-214ENST00000589677 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
SMARCA4-214ENST00000589677 TSR2Q969E8 191 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-214ENST00000589677 LRRCC1Q9C099 1032 aa17.29■□□□□ 0.36
SMARCA4-214ENST00000589677 HMOX1P09601 288 aa17.29■□□□□ 0.36
SMARCA4-214ENST00000589677 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
SMARCA4-214ENST00000589677 XBP1P17861 261 aa17.29■□□□□ 0.36
SMARCA4-214ENST00000589677 BRMS1Q9HCU9 246 aa17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 ME1P48163 572 aa17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 NOL10Q9BSC4 688 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 ZNHIT6Q9NWK9 470 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 ZSCAN12O43309 604 aa17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 PAXBP1Q9Y5B6 917 aa17.28■□□□□ 0.36
SMARCA4-214ENST00000589677 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-214ENST00000589677 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-214ENST00000589677 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-214ENST00000589677 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-214ENST00000589677 USP25Q9UHP3 1055 aa17.27■□□□□ 0.35
SMARCA4-214ENST00000589677 OFD1O75665 1012 aa17.27■□□□□ 0.35
SMARCA4-214ENST00000589677 BAG4O95429 457 aaKnown RBP17.27■□□□□ 0.35
SMARCA4-214ENST00000589677 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.35
SMARCA4-214ENST00000589677 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.35
SMARCA4-214ENST00000589677 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.35
SMARCA4-214ENST00000589677 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 SFPQP23246 707 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 TXLNBQ8N3L3 684 aa17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 BBXQ8WY36 941 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 SMAP1Q8IYB5 467 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 MAGEC2Q9UBF1 373 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-214ENST00000589677 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
SMARCA4-214ENST00000589677 ERLIN2O94905 339 aa17.25■□□□□ 0.35
SMARCA4-214ENST00000589677 KRT222Q8N1A0 295 aa17.25■□□□□ 0.35
SMARCA4-214ENST00000589677 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
SMARCA4-214ENST00000589677 ZRSR2Q15696 482 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-214ENST00000589677 PRG4Q92954 1404 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-214ENST00000589677 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
SMARCA4-214ENST00000589677 ADCY5O95622 1261 aa17.24■□□□□ 0.35
SMARCA4-214ENST00000589677 GTF2F1P35269 517 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMARCA4-214ENST00000589677 ZKSCAN5Q9Y2L8 839 aa17.24■□□□□ 0.35
SMARCA4-214ENST00000589677 ZSCAN23Q3MJ62 389 aa17.24■□□□□ 0.35
SMARCA4-214ENST00000589677 LRSAM1Q6UWE0 723 aa17.24■□□□□ 0.35
SMARCA4-214ENST00000589677 CLIP2Q9UDT6 1046 aa17.24■□□□□ 0.35
SMARCA4-214ENST00000589677 CCDC181Q5TID7 509 aa17.23■□□□□ 0.35
SMARCA4-214ENST00000589677 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
SMARCA4-214ENST00000589677 MCM3P25205 808 aa17.23■□□□□ 0.35
SMARCA4-214ENST00000589677 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
SMARCA4-214ENST00000589677 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-214ENST00000589677 PANK2Q9BZ23 570 aa17.23■□□□□ 0.35
SMARCA4-214ENST00000589677 SCAND2PQ9GZW5 306 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-214ENST00000589677 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 LUC7LQ9NQ29 371 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 MAP9Q49MG5 647 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 C16orf45Q96MC5 204 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 ANO10Q9NW15 660 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 CRACR2AQ9BSW2 395 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 DDX11Q96FC9 970 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 PLCD4Q9BRC7 762 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
SMARCA4-214ENST00000589677 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 TMEM57Q8N5G2 664 aa17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 POTEB2H3BUK9 544 aa17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 GSDMDP57764 484 aa17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 NOLC1Q14978 699 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 AMOTL1Q8IY63 956 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms