RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
DNMT1-207ENST00000586588 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
DNMT1-207ENST00000586588 KIF3AQ9Y496 699 aa16.1■□□□□ 0.17
DNMT1-207ENST00000586588 ATP2B3Q16720 1220 aa16.1■□□□□ 0.17
DNMT1-207ENST00000586588 TMEM63CQ9P1W3 806 aa16.1■□□□□ 0.17
DNMT1-207ENST00000586588 PTPRTO14522 1441 aa16.09■□□□□ 0.17
DNMT1-207ENST00000586588 MBD3O95983 291 aa16.09■□□□□ 0.17
DNMT1-207ENST00000586588 PTMAP06454 111 aaKnown RBP16.09■□□□□ 0.17
DNMT1-207ENST00000586588 RBM27Q9P2N5 1060 aaKnown RBP16.09■□□□□ 0.17
DNMT1-207ENST00000586588 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
DNMT1-207ENST00000586588 ERVK-7P63135 1459 aa16.09■□□□□ 0.17
DNMT1-207ENST00000586588 SYCE3A1L190 88 aa16.08■□□□□ 0.17
DNMT1-207ENST00000586588 GCC1Q96CN9 775 aa16.08■□□□□ 0.17
DNMT1-207ENST00000586588 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.16
DNMT1-207ENST00000586588 UGGT1Q9NYU2 1555 aa16.08■□□□□ 0.16
DNMT1-207ENST00000586588 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
DNMT1-207ENST00000586588 NOS1P29475 1434 aa16.07■□□□□ 0.16
DNMT1-207ENST00000586588 NOLC1Q14978 699 aaKnown RBP eCLIP16.07■□□□□ 0.167e-9■■■■□ 21.9
DNMT1-207ENST00000586588 SSH1Q8WYL5 1049 aa16.07■□□□□ 0.16
DNMT1-207ENST00000586588 KIAA1210Q9ULL0 1709 aa16.07■□□□□ 0.16
DNMT1-207ENST00000586588 AK9Q5TCS8 1911 aa16.07■□□□□ 0.16
DNMT1-207ENST00000586588 CDC45O75419 566 aa16.07■□□□□ 0.16
DNMT1-207ENST00000586588 IPO8O15397 1037 aaKnown RBP16.06■□□□□ 0.16
DNMT1-207ENST00000586588 TMEM51Q9NW97 253 aa16.06■□□□□ 0.16
DNMT1-207ENST00000586588 ADGRB2O60241 1585 aa16.06■□□□□ 0.16
DNMT1-207ENST00000586588 SPTLC3Q9NUV7 552 aa16.06■□□□□ 0.16
DNMT1-207ENST00000586588 NOB1Q9ULX3 412 aaKnown RBP16.05■□□□□ 0.16
DNMT1-207ENST00000586588 LMTK2Q8IWU2 1503 aa16.05■□□□□ 0.16
DNMT1-207ENST00000586588 MORC1Q86VD1 984 aa16.05■□□□□ 0.16
DNMT1-207ENST00000586588 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
DNMT1-207ENST00000586588 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-207ENST00000586588 PKP1Q13835 747 aa16.05■□□□□ 0.16
DNMT1-207ENST00000586588 UVSSAQ2YD98 709 aa16.05■□□□□ 0.16
DNMT1-207ENST00000586588 TSPY26PQ9H489 355 aa16.05■□□□□ 0.16
DNMT1-207ENST00000586588 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
DNMT1-207ENST00000586588 PDCL2Q8N4E4 241 aa16.04■□□□□ 0.16
DNMT1-207ENST00000586588 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
DNMT1-207ENST00000586588 FEZ1Q99689 392 aa16.04■□□□□ 0.16
DNMT1-207ENST00000586588 ZDHHC9Q9Y397 364 aa16.04■□□□□ 0.16
DNMT1-207ENST00000586588 TSC1Q92574 1164 aa16.03■□□□□ 0.16
DNMT1-207ENST00000586588 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-207ENST00000586588 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
DNMT1-207ENST00000586588 ANKRD45Q5TZF3 282 aa16.03■□□□□ 0.16
DNMT1-207ENST00000586588 FAM184AQ8NB25 1140 aa16.03■□□□□ 0.16
DNMT1-207ENST00000586588 CHMP4BQ9H444 224 aaKnown RBP16.03■□□□□ 0.16
DNMT1-207ENST00000586588 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-207ENST00000586588 RNF214Q8ND24 703 aa16.02■□□□□ 0.16
DNMT1-207ENST00000586588 SYAP1Q96A49 352 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-207ENST00000586588 ANKRD7Q92527 254 aa16.02■□□□□ 0.15
DNMT1-207ENST00000586588 ABCC3O15438 1527 aa16.02■□□□□ 0.15
DNMT1-207ENST00000586588 IL16Q14005 1332 aa16.02■□□□□ 0.15
DNMT1-207ENST00000586588 MED14O60244 1454 aa16.01■□□□□ 0.15
DNMT1-207ENST00000586588 GGT6Q6P531 493 aa16.01■□□□□ 0.15
DNMT1-207ENST00000586588 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
DNMT1-207ENST00000586588 NPATQ14207 1427 aa16.01■□□□□ 0.15
DNMT1-207ENST00000586588 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
DNMT1-207ENST00000586588 IPO4Q8TEX9 1081 aaKnown RBP16■□□□□ 0.15
DNMT1-207ENST00000586588 DIAPH3Q9NSV4 1193 aa16■□□□□ 0.15
DNMT1-207ENST00000586588 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
DNMT1-207ENST00000586588 SIGLEC1Q9BZZ2 1709 aa16■□□□□ 0.15
DNMT1-207ENST00000586588 ST18O60284 1047 aa16■□□□□ 0.15
DNMT1-207ENST00000586588 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
DNMT1-207ENST00000586588 PHF14O94880 888 aa16■□□□□ 0.15
DNMT1-207ENST00000586588 USP26Q9BXU7 913 aa16■□□□□ 0.15
DNMT1-207ENST00000586588 MROH2AA6NES4 1674 aa16■□□□□ 0.15
DNMT1-207ENST00000586588 ALDH1L2Q3SY69 923 aa15.99■□□□□ 0.15
DNMT1-207ENST00000586588 NSD3Q9BZ95 1437 aa15.99■□□□□ 0.15
DNMT1-207ENST00000586588 MTHFSP49914 203 aa15.98■□□□□ 0.15
DNMT1-207ENST00000586588 USP32Q8NFA0 1604 aa15.98■□□□□ 0.15
DNMT1-207ENST00000586588 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
DNMT1-207ENST00000586588 CAMSAP1Q5T5Y3 1602 aa15.98■□□□□ 0.15
DNMT1-207ENST00000586588 CTIFO43310 598 aaKnown RBP15.98■□□□□ 0.15
DNMT1-207ENST00000586588 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
DNMT1-207ENST00000586588 GABPB1Q06547 395 aaPredicted RBP15.98■□□□□ 0.15
DNMT1-207ENST00000586588 ZGPATQ8N5A5 531 aaKnown RBP15.98■□□□□ 0.15
DNMT1-207ENST00000586588 OGFRQ9NZT2 677 aa15.98■□□□□ 0.15
DNMT1-207ENST00000586588 SPDYE4A6NLX3 237 aa15.97■□□□□ 0.15
DNMT1-207ENST00000586588 BCL11BQ9C0K0 894 aaPredicted RBP15.97■□□□□ 0.15
DNMT1-207ENST00000586588 ZBTB7BO15156 539 aaPredicted RBP15.96■□□□□ 0.15
DNMT1-207ENST00000586588 CHAF1AQ13111 956 aaPredicted RBP15.96■□□□□ 0.15
DNMT1-207ENST00000586588 MYO3AQ8NEV4 1616 aa15.96■□□□□ 0.15
DNMT1-207ENST00000586588 PDIA4P13667 645 aaKnown RBP15.95■□□□□ 0.14
DNMT1-207ENST00000586588 ZNF428Q96B54 188 aa15.95■□□□□ 0.14
DNMT1-207ENST00000586588 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
DNMT1-207ENST00000586588 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
DNMT1-207ENST00000586588 U2AF2P26368 475 aaKnown RBP eCLIP15.95■□□□□ 0.14
DNMT1-207ENST00000586588 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
DNMT1-207ENST00000586588 GSPT1P15170 499 aaKnown RBP15.94■□□□□ 0.14
DNMT1-207ENST00000586588 SYCP1Q15431 976 aa15.94■□□□□ 0.14
DNMT1-207ENST00000586588 KLHL34Q8N239 644 aa15.94■□□□□ 0.14
DNMT1-207ENST00000586588 ANKRD36BQ8N2N9 1353 aa15.94■□□□□ 0.14
DNMT1-207ENST00000586588 INTS3Q68E01 1043 aaKnown RBP15.94■□□□□ 0.14
DNMT1-207ENST00000586588 ZNF771Q7L3S4 317 aaPredicted RBP15.94■□□□□ 0.14
DNMT1-207ENST00000586588 ZNF830Q96NB3 372 aaPredicted RBP15.94■□□□□ 0.14
DNMT1-207ENST00000586588 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
DNMT1-207ENST00000586588 BRD1O95696 1058 aa15.93■□□□□ 0.14
DNMT1-207ENST00000586588 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
DNMT1-207ENST00000586588 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
DNMT1-207ENST00000586588 TPM3P06753 285 aa15.93■□□□□ 0.14
DNMT1-207ENST00000586588 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms