RNA–Protein interactions for RNA: ENST00000583994.5

RHOT1-215, Transcript of ras homolog family member T1, humanhuman

TSL 2

Gene RHOT1, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-215ENST00000583994 SOX12O15370 315 aa20.37■□□□□ 0.85
RHOT1-215ENST00000583994 CSPP1Q1MSJ5 1256 aa20.37■□□□□ 0.85
RHOT1-215ENST00000583994 TRIM6-TRIM34B2RNG4 842 aa20.37■□□□□ 0.85
RHOT1-215ENST00000583994 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
RHOT1-215ENST00000583994 RILPL2Q969X0 211 aa20.37■□□□□ 0.85
RHOT1-215ENST00000583994 MYOM1P52179 1685 aa20.36■□□□□ 0.85
RHOT1-215ENST00000583994 CD109Q6YHK3 1445 aa20.36■□□□□ 0.85
RHOT1-215ENST00000583994 PLXNC1O60486 1568 aa20.36■□□□□ 0.85
RHOT1-215ENST00000583994 SDSP20132 328 aa20.36■□□□□ 0.85
RHOT1-215ENST00000583994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.36■□□□□ 0.85
RHOT1-215ENST00000583994 VAMP4O75379 141 aa20.36■□□□□ 0.85
RHOT1-215ENST00000583994 USP26Q9BXU7 913 aa20.36■□□□□ 0.85
RHOT1-215ENST00000583994 TERF2IPQ9NYB0 399 aa20.36■□□□□ 0.85
RHOT1-215ENST00000583994 MAP7D2Q96T17 732 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 RNF17Q9BXT8 1623 aaKnown RBP20.35■□□□□ 0.85
RHOT1-215ENST00000583994 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 FYB1O15117 783 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 KRT24Q2M2I5 525 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 ALDH1L2Q3SY69 923 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 LRSAM1Q6UWE0 723 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 LARP6Q9BRS8 491 aaKnown RBP20.35■□□□□ 0.85
RHOT1-215ENST00000583994 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
RHOT1-215ENST00000583994 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
RHOT1-215ENST00000583994 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
RHOT1-215ENST00000583994 TTC22Q5TAA0 569 aa20.34■□□□□ 0.85
RHOT1-215ENST00000583994 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.34■□□□□ 0.85
RHOT1-215ENST00000583994 CLTCL1P53675 1640 aa20.33■□□□□ 0.85
RHOT1-215ENST00000583994 TSPY26PQ9H489 355 aa20.33■□□□□ 0.85
RHOT1-215ENST00000583994 TTC12Q9H892 705 aaPredicted RBP20.33■□□□□ 0.85
RHOT1-215ENST00000583994 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.85
RHOT1-215ENST00000583994 ANO2Q9NQ90 1003 aa20.33■□□□□ 0.85
RHOT1-215ENST00000583994 USP25Q9UHP3 1055 aa20.33■□□□□ 0.85
RHOT1-215ENST00000583994 SASS6Q6UVJ0 657 aa20.33■□□□□ 0.85
RHOT1-215ENST00000583994 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.85
RHOT1-215ENST00000583994 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
RHOT1-215ENST00000583994 IGSF3O75054 1194 aa20.33■□□□□ 0.84
RHOT1-215ENST00000583994 IQSEC2Q5JU85 1478 aa20.32■□□□□ 0.84
RHOT1-215ENST00000583994 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
RHOT1-215ENST00000583994 CEP152O94986 1710 aa20.32■□□□□ 0.84
RHOT1-215ENST00000583994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.32■□□□□ 0.845e-6■■□□□ 11.7
RHOT1-215ENST00000583994 REC8O95072 547 aa20.31■□□□□ 0.84
RHOT1-215ENST00000583994 CHMP3Q9Y3E7 222 aa20.31■□□□□ 0.84
RHOT1-215ENST00000583994 CWC22Q9HCG8 908 aaKnown RBP20.31■□□□□ 0.84
RHOT1-215ENST00000583994 SPDYE4A6NLX3 237 aa20.3■□□□□ 0.84
RHOT1-215ENST00000583994 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
RHOT1-215ENST00000583994 ZNF500O60304 480 aaPredicted RBP20.3■□□□□ 0.84
RHOT1-215ENST00000583994 GNAI1P63096 354 aa20.3■□□□□ 0.84
RHOT1-215ENST00000583994 PRAM1Q96QH2 718 aa20.3■□□□□ 0.84
RHOT1-215ENST00000583994 ZDHHC9Q9Y397 364 aa20.3■□□□□ 0.84
RHOT1-215ENST00000583994 DYNC1I1O14576 645 aa20.29■□□□□ 0.84
RHOT1-215ENST00000583994 TMX3Q96JJ7 454 aa20.29■□□□□ 0.84
RHOT1-215ENST00000583994 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
RHOT1-215ENST00000583994 SPC24Q8NBT2 197 aa20.28■□□□□ 0.84
RHOT1-215ENST00000583994 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
RHOT1-215ENST00000583994 A0A1W2PP64 1363 aa20.28■□□□□ 0.84
RHOT1-215ENST00000583994 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
RHOT1-215ENST00000583994 EXOC6BQ9Y2D4 811 aa20.28■□□□□ 0.84
RHOT1-215ENST00000583994 GADD45BO75293 160 aaPredicted RBP20.27■□□□□ 0.84
RHOT1-215ENST00000583994 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
RHOT1-215ENST00000583994 SYAP1Q96A49 352 aaPredicted RBP20.27■□□□□ 0.84
RHOT1-215ENST00000583994 PLCH2O75038 1416 aa20.27■□□□□ 0.84
RHOT1-215ENST00000583994 ERC2O15083 957 aa20.27■□□□□ 0.84
RHOT1-215ENST00000583994 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.83
RHOT1-215ENST00000583994 FCHSD2O94868 740 aa20.26■□□□□ 0.83
RHOT1-215ENST00000583994 TRPM2O94759 1503 aa20.26■□□□□ 0.83
RHOT1-215ENST00000583994 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
RHOT1-215ENST00000583994 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.26■□□□□ 0.83
RHOT1-215ENST00000583994 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
RHOT1-215ENST00000583994 MBD3O95983 291 aa20.26■□□□□ 0.83
RHOT1-215ENST00000583994 HS1BP3Q53T59 392 aa20.26■□□□□ 0.83
RHOT1-215ENST00000583994 IL16Q14005 1332 aa20.26■□□□□ 0.83
RHOT1-215ENST00000583994 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
RHOT1-215ENST00000583994 MEIS3Q99687 375 aa20.25■□□□□ 0.83
RHOT1-215ENST00000583994 VGFO15240 615 aaPredicted RBP20.24■□□□□ 0.83
RHOT1-215ENST00000583994 HCLS1P14317 486 aaPredicted RBP20.24■□□□□ 0.83
RHOT1-215ENST00000583994 PDLIM2Q96JY6 352 aa20.24■□□□□ 0.83
RHOT1-215ENST00000583994 MAP4K4O95819 1239 aaPredicted RBP20.24■□□□□ 0.83
RHOT1-215ENST00000583994 DCTPP1Q9H773 170 aa20.24■□□□□ 0.83
RHOT1-215ENST00000583994 PRDM4Q9UKN5 801 aa20.24■□□□□ 0.83
RHOT1-215ENST00000583994 F6X3S4 739 aa20.23■□□□□ 0.83
RHOT1-215ENST00000583994 FIBPO43427 364 aa20.23■□□□□ 0.83
RHOT1-215ENST00000583994 MCCP23508 829 aa20.23■□□□□ 0.83
RHOT1-215ENST00000583994 PPP4R3BQ5MIZ7 849 aa20.23■□□□□ 0.83
RHOT1-215ENST00000583994 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
RHOT1-215ENST00000583994 SHPRHQ149N8 1683 aa20.22■□□□□ 0.83
RHOT1-215ENST00000583994 SPHKAPQ2M3C7 1700 aa20.22■□□□□ 0.83
RHOT1-215ENST00000583994 ADCY5O95622 1261 aa20.21■□□□□ 0.83
RHOT1-215ENST00000583994 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
RHOT1-215ENST00000583994 MTERF4Q7Z6M4 381 aaKnown RBP20.21■□□□□ 0.83
RHOT1-215ENST00000583994 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
RHOT1-215ENST00000583994 ABCA6Q8N139 1617 aa20.21■□□□□ 0.83
RHOT1-215ENST00000583994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.21■□□□□ 0.83
RHOT1-215ENST00000583994 NOLC1Q14978 699 aaKnown RBP eCLIP20.21■□□□□ 0.839e-6■□□□□ 9.6
RHOT1-215ENST00000583994 USP48Q86UV5 1035 aa20.21■□□□□ 0.83
RHOT1-215ENST00000583994 CDK19Q9BWU1 502 aa20.21■□□□□ 0.83
RHOT1-215ENST00000583994 CYP2E1P05181 493 aaPredicted RBP20.2■□□□□ 0.82
RHOT1-215ENST00000583994 TERF1P54274 439 aa20.2■□□□□ 0.82
RHOT1-215ENST00000583994 MCM10Q7L590 875 aa20.2■□□□□ 0.82
RHOT1-215ENST00000583994 PALD1Q9ULE6 856 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms