RNA–Protein interactions for RNA: ENST00000583994.5

RHOT1-215, Transcript of ras homolog family member T1, humanhuman

TSL 2

Gene RHOT1, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-215ENST00000583994 NISCHQ9Y2I1 1504 aa31.11■■■□□ 2.57
RHOT1-215ENST00000583994 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
RHOT1-215ENST00000583994 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
RHOT1-215ENST00000583994 PCGF6Q9BYE7 350 aa27.86■■■□□ 2.05
RHOT1-215ENST00000583994 HRCP23327 699 aa27.81■■■□□ 2.04
RHOT1-215ENST00000583994 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
RHOT1-215ENST00000583994 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
RHOT1-215ENST00000583994 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
RHOT1-215ENST00000583994 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
RHOT1-215ENST00000583994 LOC105371045A0A1W2PR82 267 aa27.07■■□□□ 1.92
RHOT1-215ENST00000583994 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
RHOT1-215ENST00000583994 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
RHOT1-215ENST00000583994 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
RHOT1-215ENST00000583994 PELP1Q8IZL8 1130 aaKnown RBP26.37■■□□□ 1.81
RHOT1-215ENST00000583994 SCAF1Q9H7N4 1312 aaKnown RBP26.31■■□□□ 1.8
RHOT1-215ENST00000583994 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
RHOT1-215ENST00000583994 DCAF1Q9Y4B6 1507 aa26.28■■□□□ 1.8
RHOT1-215ENST00000583994 ZEB1P37275 1124 aaPredicted RBP26.21■■□□□ 1.79
RHOT1-215ENST00000583994 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
RHOT1-215ENST00000583994 TTBK1Q5TCY1 1321 aaPredicted RBP25.99■■□□□ 1.75
RHOT1-215ENST00000583994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.89■■□□□ 1.74
RHOT1-215ENST00000583994 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
RHOT1-215ENST00000583994 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
RHOT1-215ENST00000583994 NEUROD1Q13562 356 aa25.78■■□□□ 1.72
RHOT1-215ENST00000583994 GTF3C3Q9Y5Q9 886 aa25.74■■□□□ 1.71
RHOT1-215ENST00000583994 ACIN1Q9UKV3 1341 aaKnown RBP25.71■■□□□ 1.71
RHOT1-215ENST00000583994 YTHDC1Q96MU7 727 aaKnown RBP25.64■■□□□ 1.7
RHOT1-215ENST00000583994 CENPBP07199 599 aaPredicted RBP25.61■■□□□ 1.69
RHOT1-215ENST00000583994 DIEXFQ68CQ4 756 aaKnown RBP25.58■■□□□ 1.69
RHOT1-215ENST00000583994 MYT1Q01538 1121 aa25.18■■□□□ 1.62
RHOT1-215ENST00000583994 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
RHOT1-215ENST00000583994 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
RHOT1-215ENST00000583994 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
RHOT1-215ENST00000583994 ZNF316A6NFI3 1004 aaPredicted RBP24.99■■□□□ 1.59
RHOT1-215ENST00000583994 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
RHOT1-215ENST00000583994 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
RHOT1-215ENST00000583994 MIER1Q8N108 512 aa24.93■■□□□ 1.58
RHOT1-215ENST00000583994 RANGAP1P46060 587 aaPredicted RBP24.92■■□□□ 1.58
RHOT1-215ENST00000583994 ABCC9O60706 1549 aa24.9■■□□□ 1.58
RHOT1-215ENST00000583994 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
RHOT1-215ENST00000583994 APLP2Q06481 763 aa24.57■■□□□ 1.52
RHOT1-215ENST00000583994 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
RHOT1-215ENST00000583994 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
RHOT1-215ENST00000583994 BCANQ96GW7 911 aa24.46■■□□□ 1.51
RHOT1-215ENST00000583994 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
RHOT1-215ENST00000583994 SOGA1O94964 1423 aa24.39■■□□□ 1.5
RHOT1-215ENST00000583994 ABCC8Q09428 1581 aa24.38■■□□□ 1.49
RHOT1-215ENST00000583994 WIZO95785 1651 aa24.37■■□□□ 1.49
RHOT1-215ENST00000583994 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
RHOT1-215ENST00000583994 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
RHOT1-215ENST00000583994 ITGAEP38570 1179 aa24.29■■□□□ 1.48
RHOT1-215ENST00000583994 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
RHOT1-215ENST00000583994 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
RHOT1-215ENST00000583994 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
RHOT1-215ENST00000583994 TSHZ2Q9NRE2 1034 aa24.15■■□□□ 1.46
RHOT1-215ENST00000583994 KCNH8Q96L42 1107 aa24.09■■□□□ 1.45
RHOT1-215ENST00000583994 ANP32EQ9BTT0 268 aa24.09■■□□□ 1.45
RHOT1-215ENST00000583994 FKBP8Q14318 412 aa24.04■■□□□ 1.44
RHOT1-215ENST00000583994 CLIP1P30622 1438 aa23.99■■□□□ 1.43
RHOT1-215ENST00000583994 GOLGA3Q08378 1498 aa23.98■■□□□ 1.43
RHOT1-215ENST00000583994 BCL11AQ9H165 835 aa23.98■■□□□ 1.43
RHOT1-215ENST00000583994 NEFLP07196 543 aa23.92■■□□□ 1.42
RHOT1-215ENST00000583994 HIRIP3Q9BW71 556 aaPredicted RBP23.9■■□□□ 1.42
RHOT1-215ENST00000583994 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
RHOT1-215ENST00000583994 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
RHOT1-215ENST00000583994 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
RHOT1-215ENST00000583994 TRIM52Q96A61 297 aa23.86■■□□□ 1.41
RHOT1-215ENST00000583994 CLSPNQ9HAW4 1339 aa23.85■■□□□ 1.41
RHOT1-215ENST00000583994 EEA1Q15075 1411 aa23.81■■□□□ 1.4
RHOT1-215ENST00000583994 KANK4Q5T7N3 995 aaPredicted RBP23.78■■□□□ 1.4
RHOT1-215ENST00000583994 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
RHOT1-215ENST00000583994 ATP1B4Q9UN42 357 aaPredicted RBP23.75■■□□□ 1.39
RHOT1-215ENST00000583994 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
RHOT1-215ENST00000583994 ERICH6Q7L0X2 663 aa23.73■■□□□ 1.39
RHOT1-215ENST00000583994 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.39
RHOT1-215ENST00000583994 NACADO15069 1562 aa23.7■■□□□ 1.39
RHOT1-215ENST00000583994 RBM19Q9Y4C8 960 aaKnown RBP23.69■■□□□ 1.38
RHOT1-215ENST00000583994 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
RHOT1-215ENST00000583994 EIF4G1Q04637 1599 aaKnown RBP23.68■■□□□ 1.38
RHOT1-215ENST00000583994 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
RHOT1-215ENST00000583994 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
RHOT1-215ENST00000583994 SIN3AQ96ST3 1273 aa23.64■■□□□ 1.37
RHOT1-215ENST00000583994 RAPGEF2Q9Y4G8 1499 aa23.63■■□□□ 1.37
RHOT1-215ENST00000583994 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
RHOT1-215ENST00000583994 ANP32CO43423 234 aa23.54■■□□□ 1.36
RHOT1-215ENST00000583994 SMARCA4P51532 1647 aa23.47■■□□□ 1.35
RHOT1-215ENST00000583994 KIF21BO75037 1637 aa23.43■■□□□ 1.34
RHOT1-215ENST00000583994 P3H3Q8IVL6 736 aa23.43■■□□□ 1.34
RHOT1-215ENST00000583994 CNGB1Q14028 1251 aaPredicted RBP23.42■■□□□ 1.34
RHOT1-215ENST00000583994 HNRNPUQ00839 825 aaKnown RBP eCLIP23.41■■□□□ 1.34
RHOT1-215ENST00000583994 CDK11AQ9UQ88 783 aaPredicted RBP23.39■■□□□ 1.34
RHOT1-215ENST00000583994 CCNB3Q8WWL7 1395 aa23.39■■□□□ 1.33
RHOT1-215ENST00000583994 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
RHOT1-215ENST00000583994 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
RHOT1-215ENST00000583994 MSH5O43196 834 aa23.35■■□□□ 1.33
RHOT1-215ENST00000583994 NBR1Q14596 966 aa23.24■■□□□ 1.31
RHOT1-215ENST00000583994 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
RHOT1-215ENST00000583994 PPP1R15AO75807 674 aaPredicted RBP23.2■■□□□ 1.3
RHOT1-215ENST00000583994 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
RHOT1-215ENST00000583994 SENP3-EIF4A1A0A087X0R7 540 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms