RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 WDR17Q8IZU2 1322 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 PEAK1Q9H792 1746 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-227ENST00000583352 NEUROD1Q13562 356 aa13.83□□□□□ -0.2
CDK5RAP3-227ENST00000583352 CDCA7Q9BWT1 371 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-227ENST00000583352 TTC21AQ8NDW8 1320 aa13.83□□□□□ -0.2
CDK5RAP3-227ENST00000583352 AKAP12Q02952 1782 aa13.83□□□□□ -0.2
CDK5RAP3-227ENST00000583352 ARHGEF25Q86VW2 580 aa13.82□□□□□ -0.2
CDK5RAP3-227ENST00000583352 AXIN2Q9Y2T1 843 aa13.82□□□□□ -0.2
CDK5RAP3-227ENST00000583352 WNK3Q9BYP7 1800 aa13.81□□□□□ -0.2
CDK5RAP3-227ENST00000583352 PLSCR1O15162 318 aa13.81□□□□□ -0.2
CDK5RAP3-227ENST00000583352 SOX12O15370 315 aa13.81□□□□□ -0.2
CDK5RAP3-227ENST00000583352 CSB-PGBD3P0DP91 1061 aa13.81□□□□□ -0.2
CDK5RAP3-227ENST00000583352 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-227ENST00000583352 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
CDK5RAP3-227ENST00000583352 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
CDK5RAP3-227ENST00000583352 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-227ENST00000583352 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
CDK5RAP3-227ENST00000583352 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-227ENST00000583352 KCNQ2O43526 872 aa13.79□□□□□ -0.2
CDK5RAP3-227ENST00000583352 MARCH10Q8NA82 808 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-227ENST00000583352 CARD10Q9BWT7 1032 aa13.79□□□□□ -0.2
CDK5RAP3-227ENST00000583352 PPP1R1BQ9UD71 204 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-227ENST00000583352 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
CDK5RAP3-227ENST00000583352 CCDC7Q96M83 1385 aa13.78□□□□□ -0.2
CDK5RAP3-227ENST00000583352 BCL9O00512 1426 aa13.78□□□□□ -0.2
CDK5RAP3-227ENST00000583352 NFAT5O94916 1531 aa13.78□□□□□ -0.2
CDK5RAP3-227ENST00000583352 ABCC6O95255 1503 aa13.77□□□□□ -0.21
CDK5RAP3-227ENST00000583352 SRCAPQ6ZRS2 3230 aa13.77□□□□□ -0.21
CDK5RAP3-227ENST00000583352 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
CDK5RAP3-227ENST00000583352 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
CDK5RAP3-227ENST00000583352 EXOC5O00471 708 aa13.76□□□□□ -0.21
CDK5RAP3-227ENST00000583352 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
CDK5RAP3-227ENST00000583352 USP31Q70CQ4 1352 aa13.75□□□□□ -0.21
CDK5RAP3-227ENST00000583352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDK5RAP3-227ENST00000583352 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-227ENST00000583352 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
CDK5RAP3-227ENST00000583352 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
CDK5RAP3-227ENST00000583352 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
CDK5RAP3-227ENST00000583352 TNS2Q63HR2 1409 aa13.73□□□□□ -0.21
CDK5RAP3-227ENST00000583352 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
CDK5RAP3-227ENST00000583352 HDGFL2Q7Z4V5 671 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-227ENST00000583352 TMC1Q8TDI8 760 aa13.73□□□□□ -0.21
CDK5RAP3-227ENST00000583352 USP54Q70EL1 1684 aa13.72□□□□□ -0.21
CDK5RAP3-227ENST00000583352 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
CDK5RAP3-227ENST00000583352 NME9Q86XW9 330 aa13.72□□□□□ -0.21
CDK5RAP3-227ENST00000583352 PROM2Q8N271 834 aa13.72□□□□□ -0.21
CDK5RAP3-227ENST00000583352 NLRP2Q9NX02 1062 aa13.72□□□□□ -0.21
CDK5RAP3-227ENST00000583352 STK32BQ9NY57 414 aa13.72□□□□□ -0.21
CDK5RAP3-227ENST00000583352 CASZ1Q86V15 1759 aa13.72□□□□□ -0.21
CDK5RAP3-227ENST00000583352 ERBB3P21860 1342 aa13.71□□□□□ -0.21
CDK5RAP3-227ENST00000583352 YY1P25490 414 aa13.71□□□□□ -0.21
CDK5RAP3-227ENST00000583352 CD163L1Q9NR16 1453 aa13.71□□□□□ -0.21
CDK5RAP3-227ENST00000583352 IL2RBP14784 551 aa13.7□□□□□ -0.22
CDK5RAP3-227ENST00000583352 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
CDK5RAP3-227ENST00000583352 LTN1O94822 1766 aa13.7□□□□□ -0.22
CDK5RAP3-227ENST00000583352 ZBTB7AO95365 584 aa13.69□□□□□ -0.22
CDK5RAP3-227ENST00000583352 SLC15A2Q16348 729 aa13.69□□□□□ -0.22
CDK5RAP3-227ENST00000583352 ANKRD24Q8TF21 1146 aa13.69□□□□□ -0.22
CDK5RAP3-227ENST00000583352 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
CDK5RAP3-227ENST00000583352 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-227ENST00000583352 TONSLQ96HA7 1378 aa13.69□□□□□ -0.22
CDK5RAP3-227ENST00000583352 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
CDK5RAP3-227ENST00000583352 ACSBG1Q96GR2 724 aa13.68□□□□□ -0.22
CDK5RAP3-227ENST00000583352 PUS7Q96PZ0 661 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-227ENST00000583352 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-227ENST00000583352 A0A1W2PP64 1363 aa13.67□□□□□ -0.22
CDK5RAP3-227ENST00000583352 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-227ENST00000583352 PTGER2P43116 358 aa13.65□□□□□ -0.22
CDK5RAP3-227ENST00000583352 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
CDK5RAP3-227ENST00000583352 MYOM1P52179 1685 aa13.65□□□□□ -0.22
CDK5RAP3-227ENST00000583352 IP6K1Q92551 441 aa13.64□□□□□ -0.23
CDK5RAP3-227ENST00000583352 BTAF1O14981 1849 aa13.63□□□□□ -0.23
CDK5RAP3-227ENST00000583352 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-227ENST00000583352 PAPPAQ13219 1627 aa13.62□□□□□ -0.23
CDK5RAP3-227ENST00000583352 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
CDK5RAP3-227ENST00000583352 LTV1Q96GA3 475 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-227ENST00000583352 COG3Q96JB2 828 aa13.62□□□□□ -0.23
CDK5RAP3-227ENST00000583352 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
CDK5RAP3-227ENST00000583352 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-227ENST00000583352 FHDC1Q9C0D6 1143 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-227ENST00000583352 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
CDK5RAP3-227ENST00000583352 AMPHP49418 695 aa13.6□□□□□ -0.23
CDK5RAP3-227ENST00000583352 TESK2Q96S53 571 aa13.6□□□□□ -0.23
CDK5RAP3-227ENST00000583352 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
CDK5RAP3-227ENST00000583352 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
CDK5RAP3-227ENST00000583352 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
CDK5RAP3-227ENST00000583352 MAP3K19Q56UN5 1328 aa13.59□□□□□ -0.23
CDK5RAP3-227ENST00000583352 HOXC9P31274 260 aa13.58□□□□□ -0.24
CDK5RAP3-227ENST00000583352 SLC27A3Q5K4L6 730 aa13.58□□□□□ -0.24
CDK5RAP3-227ENST00000583352 ARXQ96QS3 562 aa13.58□□□□□ -0.24
CDK5RAP3-227ENST00000583352 LRRC4BQ9NT99 713 aa13.58□□□□□ -0.24
CDK5RAP3-227ENST00000583352 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
CDK5RAP3-227ENST00000583352 SLC16A10Q8TF71 515 aa13.56□□□□□ -0.24
CDK5RAP3-227ENST00000583352 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
CDK5RAP3-227ENST00000583352 SYTL4Q96C24 671 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-227ENST00000583352 RTL1A6NKG5 1358 aa13.56□□□□□ -0.24
CDK5RAP3-227ENST00000583352 MAP3K5Q99683 1374 aa13.56□□□□□ -0.24
CDK5RAP3-227ENST00000583352 FBLN1P23142 703 aa13.55□□□□□ -0.24
CDK5RAP3-227ENST00000583352 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms