RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 IFFO2Q5TF58 517 aa8.82□□□□□ -1
CMTM4-205ENST00000581487 NOB1Q9ULX3 412 aaKnown RBP8.82□□□□□ -1
CMTM4-205ENST00000581487 TIGD1Q96MW7 591 aa8.82□□□□□ -1
CMTM4-205ENST00000581487 GRIN2BQ13224 1484 aa8.82□□□□□ -1
CMTM4-205ENST00000581487 ZKSCAN1P17029 563 aaPredicted RBP8.82□□□□□ -1
CMTM4-205ENST00000581487 MRPS9P82933 396 aaKnown RBP8.82□□□□□ -1
CMTM4-205ENST00000581487 SASS6Q6UVJ0 657 aa8.82□□□□□ -1
CMTM4-205ENST00000581487 PRPF40AO75400 957 aaKnown RBP8.81□□□□□ -1
CMTM4-205ENST00000581487 ATP6V1E1P36543 226 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 SLC12A5Q9H2X9 1139 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 TSPY26PQ9H489 355 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 POLA1P09884 1462 aaPredicted RBP8.81□□□□□ -1
CMTM4-205ENST00000581487 PPP4R3BQ5MIZ7 849 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 C1orf115Q9H7X2 142 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 CT47B1P0C2W7 299 aaPredicted RBP8.81□□□□□ -1
CMTM4-205ENST00000581487 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
CMTM4-205ENST00000581487 DZIP1Q86YF9 867 aaKnown RBP8.81□□□□□ -1
CMTM4-205ENST00000581487 RUFY2Q8WXA3 655 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 VGLL3A8MV65 326 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 MBD3O95983 291 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 TRIM21P19474 475 aaKnown RBP8.81□□□□□ -1
CMTM4-205ENST00000581487 MPNDQ8N594 471 aa8.81□□□□□ -1
CMTM4-205ENST00000581487 AFAP1Q8N556 730 aa8.8□□□□□ -1
CMTM4-205ENST00000581487 ATF7IPQ6VMQ6 1270 aa8.8□□□□□ -1
CMTM4-205ENST00000581487 CIZ1Q9ULV3 898 aaPredicted RBP8.8□□□□□ -1
CMTM4-205ENST00000581487 SMC3Q9UQE7 1217 aa8.8□□□□□ -1
CMTM4-205ENST00000581487 OFD1O75665 1012 aa8.8□□□□□ -1
CMTM4-205ENST00000581487 PRKAR2BP31323 418 aa8.8□□□□□ -1
CMTM4-205ENST00000581487 VPS37CA5D8V6 355 aaPredicted RBP8.8□□□□□ -1
CMTM4-205ENST00000581487 K7ELQ4 463 aaPredicted RBP8.8□□□□□ -1
CMTM4-205ENST00000581487 RNF20Q5VTR2 975 aa8.8□□□□□ -1
CMTM4-205ENST00000581487 RBM28Q9NW13 759 aaKnown RBP8.8□□□□□ -1
CMTM4-205ENST00000581487 ABCC5O15440 1437 aa8.8□□□□□ -1
CMTM4-205ENST00000581487 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
CMTM4-205ENST00000581487 SYNE3Q6ZMZ3 975 aa8.79□□□□□ -1
CMTM4-205ENST00000581487 FAM184AQ8NB25 1140 aa8.79□□□□□ -1
CMTM4-205ENST00000581487 ERLIN2O94905 339 aa8.79□□□□□ -1
CMTM4-205ENST00000581487 ANKRD18BA2A2Z9 1011 aa8.79□□□□□ -1
CMTM4-205ENST00000581487 PRPF31Q8WWY3 499 aaKnown RBP8.79□□□□□ -1
CMTM4-205ENST00000581487 LETM1O95202 739 aaPredicted RBP8.79□□□□□ -1
CMTM4-205ENST00000581487 NEK4P51957 841 aa8.79□□□□□ -1
CMTM4-205ENST00000581487 TWISTNBQ3B726 338 aaPredicted RBP8.79□□□□□ -1
CMTM4-205ENST00000581487 CCDC91Q7Z6B0 441 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 EPRSP07814 1512 aaKnown RBP8.78□□□□□ -1
CMTM4-205ENST00000581487 NESP48681 1621 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 PCF11O94913 1555 aaKnown RBP8.78□□□□□ -1
CMTM4-205ENST00000581487 SLU7O95391 586 aaKnown RBP8.78□□□□□ -1
CMTM4-205ENST00000581487 NECTIN2Q92692 538 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 ZNHIT6Q9NWK9 470 aaKnown RBP8.78□□□□□ -1
CMTM4-205ENST00000581487 RPRD2Q5VT52 1461 aaKnown RBP8.78□□□□□ -1
CMTM4-205ENST00000581487 OSCARQ8IYS5 282 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 RGS22Q8NE09 1264 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 TOPBP1Q92547 1522 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 IFT140Q96RY7 1462 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 EIF2S2P20042 333 aaKnown RBP8.78□□□□□ -1
CMTM4-205ENST00000581487 IFIT2P09913 472 aaKnown RBP8.78□□□□□ -1
CMTM4-205ENST00000581487 CA8P35219 290 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 DUSP27Q5VZP5 1158 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 CHD1LQ86WJ1 897 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 BICD2Q8TD16 824 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 RFX1P22670 979 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 SSX2IPQ9Y2D8 614 aa8.78□□□□□ -1
CMTM4-205ENST00000581487 CC2D2AQ9P2K1 1620 aa8.77□□□□□ -1
CMTM4-205ENST00000581487 PTPRKQ15262 1439 aa8.77□□□□□ -1
CMTM4-205ENST00000581487 GTF2F1P35269 517 aaKnown RBP eCLIP8.77□□□□□ -1
CMTM4-205ENST00000581487 DRC1Q96MC2 740 aa8.77□□□□□ -1
CMTM4-205ENST00000581487 TSPYL4Q9UJ04 414 aa8.77□□□□□ -1
CMTM4-205ENST00000581487 FAM184BQ9ULE4 1060 aa8.77□□□□□ -1.01
CMTM4-205ENST00000581487 SHTN1A0MZ66 631 aa8.77□□□□□ -1.01
CMTM4-205ENST00000581487 RARSP54136 660 aaKnown RBP8.77□□□□□ -1.01
CMTM4-205ENST00000581487 ZSCAN30Q86W11 494 aa8.77□□□□□ -1.01
CMTM4-205ENST00000581487 ZFP91Q96JP5 570 aaPredicted RBP8.77□□□□□ -1.01
CMTM4-205ENST00000581487 TRIM5Q9C035 493 aa8.77□□□□□ -1.01
CMTM4-205ENST00000581487 TDO2P48775 406 aa8.77□□□□□ -1.01
CMTM4-205ENST00000581487 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
CMTM4-205ENST00000581487 LRPPRCP42704 1394 aaKnown RBP8.76□□□□□ -1.01
CMTM4-205ENST00000581487 PDILTQ8N807 584 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 BICRAQ9NZM4 1560 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 CDK13Q14004 1512 aaKnown RBP8.76□□□□□ -1.01
CMTM4-205ENST00000581487 CHMP4CQ96CF2 233 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 DDX11Q96FC9 970 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 GOLGA6L10A0A0M3HER8 536 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 GOLGA6L10A6NI86 522 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 ANAPC15P60006 121 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 POLR3GO15318 223 aaPredicted RBP8.76□□□□□ -1.01
CMTM4-205ENST00000581487 MCM2P49736 904 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 TEFQ10587 303 aa8.76□□□□□ -1.01
CMTM4-205ENST00000581487 C9orf78Q9NZ63 289 aaPredicted RBP8.76□□□□□ -1.01
CMTM4-205ENST00000581487 PLEKHH2Q8IVE3 1493 aa8.75□□□□□ -1.01
CMTM4-205ENST00000581487 WDHD1O75717 1129 aaPredicted RBP8.75□□□□□ -1.01
CMTM4-205ENST00000581487 FAM193AP78312 1265 aa8.75□□□□□ -1.01
CMTM4-205ENST00000581487 TRIM29Q14134 588 aa8.75□□□□□ -1.01
CMTM4-205ENST00000581487 DNAI2Q9GZS0 605 aa8.75□□□□□ -1.01
CMTM4-205ENST00000581487 EID1Q9Y6B2 187 aa8.75□□□□□ -1.01
CMTM4-205ENST00000581487 ABCA10Q8WWZ4 1543 aa8.75□□□□□ -1.01
CMTM4-205ENST00000581487 TAX1BP1Q86VP1 789 aa8.75□□□□□ -1.01
CMTM4-205ENST00000581487 IKQ13123 557 aaPredicted RBP8.75□□□□□ -1.01
CMTM4-205ENST00000581487 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
CMTM4-205ENST00000581487 HOOK1Q9UJC3 728 aaKnown RBP8.75□□□□□ -1.01
CMTM4-205ENST00000581487 SYNJ2O15056 1496 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms