RNA–Protein interactions for RNA: ENST00000581246.5

MSL1-208, Transcript of male specific lethal 1 homolog, humanhuman

TSL 4

Gene MSL1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-208ENST00000581246 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
MSL1-208ENST00000581246 CRYBG1Q9Y4K1 1723 aa13.65□□□□□ -0.22
MSL1-208ENST00000581246 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
MSL1-208ENST00000581246 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
MSL1-208ENST00000581246 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
MSL1-208ENST00000581246 IQSEC2Q5JU85 1478 aa13.65□□□□□ -0.22
MSL1-208ENST00000581246 USP19O94966 1318 aa13.64□□□□□ -0.23
MSL1-208ENST00000581246 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
MSL1-208ENST00000581246 APAF1O14727 1248 aa13.64□□□□□ -0.23
MSL1-208ENST00000581246 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
MSL1-208ENST00000581246 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
MSL1-208ENST00000581246 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.233e-6■□□□□ 8.2
MSL1-208ENST00000581246 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
MSL1-208ENST00000581246 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
MSL1-208ENST00000581246 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
MSL1-208ENST00000581246 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
MSL1-208ENST00000581246 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
MSL1-208ENST00000581246 HSP90AB2PQ58FF8 381 aa13.63□□□□□ -0.23
MSL1-208ENST00000581246 FLT4P35916 1363 aa13.62□□□□□ -0.23
MSL1-208ENST00000581246 FCHSD2O94868 740 aa13.62□□□□□ -0.23
MSL1-208ENST00000581246 RSPH6AQ9H0K4 717 aa13.62□□□□□ -0.23
MSL1-208ENST00000581246 SOS2Q07890 1332 aaPredicted RBP13.62□□□□□ -0.23
MSL1-208ENST00000581246 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
MSL1-208ENST00000581246 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
MSL1-208ENST00000581246 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
MSL1-208ENST00000581246 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
MSL1-208ENST00000581246 SOX12O15370 315 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 GCP02774 474 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 HOXC9P31274 260 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 KCNH5Q8NCM2 988 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 COL18A1P39060 1754 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 RGPD5Q99666 1765 aa13.6□□□□□ -0.23
MSL1-208ENST00000581246 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
MSL1-208ENST00000581246 POLA2Q14181 598 aa13.59□□□□□ -0.23
MSL1-208ENST00000581246 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
MSL1-208ENST00000581246 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
MSL1-208ENST00000581246 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
MSL1-208ENST00000581246 TRMT2AQ8IZ69 625 aaKnown RBP13.59□□□□□ -0.23
MSL1-208ENST00000581246 IP6K1Q92551 441 aa13.59□□□□□ -0.23
MSL1-208ENST00000581246 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
MSL1-208ENST00000581246 AMPHP49418 695 aa13.58□□□□□ -0.24
MSL1-208ENST00000581246 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.24
MSL1-208ENST00000581246 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
MSL1-208ENST00000581246 WWC1Q8IX03 1113 aa13.57□□□□□ -0.24
MSL1-208ENST00000581246 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
MSL1-208ENST00000581246 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
MSL1-208ENST00000581246 HMOX1P09601 288 aa13.56□□□□□ -0.24
MSL1-208ENST00000581246 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
MSL1-208ENST00000581246 PHACTR3Q96KR7 559 aa13.56□□□□□ -0.24
MSL1-208ENST00000581246 ARHGEF10O15013 1369 aa13.56□□□□□ -0.24
MSL1-208ENST00000581246 KDRP35968 1356 aa13.56□□□□□ -0.24
MSL1-208ENST00000581246 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
MSL1-208ENST00000581246 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
MSL1-208ENST00000581246 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
MSL1-208ENST00000581246 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
MSL1-208ENST00000581246 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
MSL1-208ENST00000581246 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
MSL1-208ENST00000581246 IGSF1Q8N6C5 1336 aa13.55□□□□□ -0.24
MSL1-208ENST00000581246 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
MSL1-208ENST00000581246 AHDC1Q5TGY3 1603 aaPredicted RBP13.54□□□□□ -0.24
MSL1-208ENST00000581246 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
MSL1-208ENST00000581246 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
MSL1-208ENST00000581246 EYA1Q99502 592 aa13.54□□□□□ -0.24
MSL1-208ENST00000581246 SULT6B1Q6IMI4 303 aa13.53□□□□□ -0.24
MSL1-208ENST00000581246 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
MSL1-208ENST00000581246 NFE2L2Q16236 605 aa13.52□□□□□ -0.25
MSL1-208ENST00000581246 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
MSL1-208ENST00000581246 AXIN2Q9Y2T1 843 aa13.52□□□□□ -0.25
MSL1-208ENST00000581246 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
MSL1-208ENST00000581246 NCAPD2Q15021 1401 aa13.52□□□□□ -0.25
MSL1-208ENST00000581246 ABCC6O95255 1503 aa13.52□□□□□ -0.25
MSL1-208ENST00000581246 CAMTA1Q9Y6Y1 1673 aa13.52□□□□□ -0.25
MSL1-208ENST00000581246 CPDO75976 1380 aa13.51□□□□□ -0.25
MSL1-208ENST00000581246 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
MSL1-208ENST00000581246 NEUROD2Q15784 382 aa13.51□□□□□ -0.25
MSL1-208ENST00000581246 SUPT16HQ9Y5B9 1047 aaKnown RBP13.51□□□□□ -0.25
MSL1-208ENST00000581246 LMO7Q8WWI1 1683 aa13.5□□□□□ -0.25
MSL1-208ENST00000581246 RIPK4P57078 832 aa13.5□□□□□ -0.25
MSL1-208ENST00000581246 E9PSI1 815 aa13.49□□□□□ -0.25
MSL1-208ENST00000581246 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
MSL1-208ENST00000581246 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
MSL1-208ENST00000581246 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
MSL1-208ENST00000581246 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
MSL1-208ENST00000581246 IL16Q14005 1332 aa13.48□□□□□ -0.25
MSL1-208ENST00000581246 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
MSL1-208ENST00000581246 COL16A1Q07092 1604 aaPredicted RBP13.47□□□□□ -0.25
MSL1-208ENST00000581246 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
MSL1-208ENST00000581246 PHLPP1O60346 1717 aa13.47□□□□□ -0.25
MSL1-208ENST00000581246 KIAA0232Q92628 1395 aa13.46□□□□□ -0.25
MSL1-208ENST00000581246 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.25
MSL1-208ENST00000581246 LRRC59Q96AG4 307 aaKnown RBP13.46□□□□□ -0.25
MSL1-208ENST00000581246 FAM208AQ9UK61 1670 aaKnown RBP13.46□□□□□ -0.26
MSL1-208ENST00000581246 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
MSL1-208ENST00000581246 NEFMP07197 916 aa13.45□□□□□ -0.26
MSL1-208ENST00000581246 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
MSL1-208ENST00000581246 ERBB3P21860 1342 aa13.44□□□□□ -0.26
MSL1-208ENST00000581246 TOM1O60784 492 aa13.44□□□□□ -0.26
MSL1-208ENST00000581246 MTHFSDQ2M296 383 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms