RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PANK3Q9H999 370 aa11.01□□□□□ -0.65
COPS3-215ENST00000578317 CABP1Q9NZU7 370 aa11.01□□□□□ -0.65
COPS3-215ENST00000578317 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
COPS3-215ENST00000578317 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
COPS3-215ENST00000578317 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.01□□□□□ -0.65
COPS3-215ENST00000578317 PRR36Q9H6K5 1346 aa11□□□□□ -0.65
COPS3-215ENST00000578317 ATF3P18847 181 aa11□□□□□ -0.65
COPS3-215ENST00000578317 MSH6P52701 1360 aa10.99□□□□□ -0.65
COPS3-215ENST00000578317 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
COPS3-215ENST00000578317 TMC1Q8TDI8 760 aa10.99□□□□□ -0.65
COPS3-215ENST00000578317 TERF2IPQ9NYB0 399 aa10.99□□□□□ -0.65
COPS3-215ENST00000578317 XIRP1Q702N8 1843 aaKnown RBP10.99□□□□□ -0.65
COPS3-215ENST00000578317 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
COPS3-215ENST00000578317 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
COPS3-215ENST00000578317 CRISPLD2Q9H0B8 497 aa10.98□□□□□ -0.65
COPS3-215ENST00000578317 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
COPS3-215ENST00000578317 ATP7BP35670 1465 aa10.97□□□□□ -0.65
COPS3-215ENST00000578317 ANKRD36BQ8N2N9 1353 aa10.97□□□□□ -0.65
COPS3-215ENST00000578317 HDGFL2Q7Z4V5 671 aaPredicted RBP10.97□□□□□ -0.65
COPS3-215ENST00000578317 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
COPS3-215ENST00000578317 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
COPS3-215ENST00000578317 NUTM2FA1L443 756 aa10.96□□□□□ -0.65
COPS3-215ENST00000578317 PLCG2P16885 1265 aa10.96□□□□□ -0.65
COPS3-215ENST00000578317 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
COPS3-215ENST00000578317 CPSF1Q10570 1443 aaKnown RBP10.96□□□□□ -0.66
COPS3-215ENST00000578317 PPIP5K1Q6PFW1 1433 aa10.96□□□□□ -0.66
COPS3-215ENST00000578317 SLAIN2Q9P270 581 aa10.95□□□□□ -0.66
COPS3-215ENST00000578317 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
COPS3-215ENST00000578317 KNSTRNQ9Y448 316 aa10.95□□□□□ -0.66
COPS3-215ENST00000578317 POLR3AO14802 1390 aaPredicted RBP10.95□□□□□ -0.66
COPS3-215ENST00000578317 NPC1L1Q9UHC9 1359 aa10.95□□□□□ -0.66
COPS3-215ENST00000578317 ACEP12821 1306 aa10.95□□□□□ -0.66
COPS3-215ENST00000578317 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
COPS3-215ENST00000578317 C7P10643 843 aa10.95□□□□□ -0.66
COPS3-215ENST00000578317 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
COPS3-215ENST00000578317 C1orf167Q5SNV9 1468 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 CD163L1Q9NR16 1453 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 SEMA3EO15041 775 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 PDE4AP27815 886 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 MST1RQ04912 1400 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 NALCNQ8IZF0 1738 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
COPS3-215ENST00000578317 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
COPS3-215ENST00000578317 NGDNQ8NEJ9 315 aaKnown RBP10.93□□□□□ -0.66
COPS3-215ENST00000578317 ZC3H15Q8WU90 426 aaKnown RBP10.93□□□□□ -0.66
COPS3-215ENST00000578317 ORAI2Q96SN7 254 aa10.93□□□□□ -0.66
COPS3-215ENST00000578317 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
COPS3-215ENST00000578317 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
COPS3-215ENST00000578317 SEC24BO95487 1268 aa10.92□□□□□ -0.66
COPS3-215ENST00000578317 MFSD10Q14728 455 aa10.92□□□□□ -0.66
COPS3-215ENST00000578317 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
COPS3-215ENST00000578317 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
COPS3-215ENST00000578317 CGNL1Q0VF96 1302 aa10.92□□□□□ -0.66
COPS3-215ENST00000578317 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
COPS3-215ENST00000578317 SSH2Q76I76 1423 aa10.91□□□□□ -0.66
COPS3-215ENST00000578317 ANP32CO43423 234 aa10.91□□□□□ -0.66
COPS3-215ENST00000578317 FMN2Q9NZ56 1722 aa10.9□□□□□ -0.66
COPS3-215ENST00000578317 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
COPS3-215ENST00000578317 FYB1O15117 783 aa10.9□□□□□ -0.66
COPS3-215ENST00000578317 FOXO3O43524 673 aa10.9□□□□□ -0.66
COPS3-215ENST00000578317 TOM1O60784 492 aa10.9□□□□□ -0.66
COPS3-215ENST00000578317 PSME1Q06323 249 aa10.9□□□□□ -0.66
COPS3-215ENST00000578317 RALBP1Q15311 655 aa10.9□□□□□ -0.66
COPS3-215ENST00000578317 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
COPS3-215ENST00000578317 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.66
COPS3-215ENST00000578317 USP32Q8NFA0 1604 aa10.9□□□□□ -0.67
COPS3-215ENST00000578317 TTC21BQ7Z4L5 1316 aa10.89□□□□□ -0.67
COPS3-215ENST00000578317 NSD2O96028 1365 aa10.89□□□□□ -0.67
COPS3-215ENST00000578317 SMYD5Q6GMV2 418 aa10.89□□□□□ -0.67
COPS3-215ENST00000578317 USP6P35125 1406 aa10.89□□□□□ -0.67
COPS3-215ENST00000578317 NSD3Q9BZ95 1437 aa10.89□□□□□ -0.67
COPS3-215ENST00000578317 NPHP3Q7Z494 1330 aa10.89□□□□□ -0.67
COPS3-215ENST00000578317 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
COPS3-215ENST00000578317 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
COPS3-215ENST00000578317 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
COPS3-215ENST00000578317 MYOM1P52179 1685 aa10.88□□□□□ -0.67
COPS3-215ENST00000578317 KRT28Q7Z3Y7 464 aa10.87□□□□□ -0.67
COPS3-215ENST00000578317 GPHNQ9NQX3 736 aaPredicted RBP10.87□□□□□ -0.67
COPS3-215ENST00000578317 ARIH1Q9Y4X5 557 aaPredicted RBP10.87□□□□□ -0.67
COPS3-215ENST00000578317 TOPAZ1Q8N9V7 1692 aa10.86□□□□□ -0.67
COPS3-215ENST00000578317 CC2D1BQ5T0F9 858 aaKnown RBP10.86□□□□□ -0.67
COPS3-215ENST00000578317 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
COPS3-215ENST00000578317 L3MBTL3Q96JM7 780 aaPredicted RBP10.86□□□□□ -0.67
COPS3-215ENST00000578317 SOS2Q07890 1332 aaPredicted RBP10.86□□□□□ -0.67
COPS3-215ENST00000578317 USP31Q70CQ4 1352 aa10.86□□□□□ -0.67
COPS3-215ENST00000578317 PARD3Q8TEW0 1356 aa10.86□□□□□ -0.67
COPS3-215ENST00000578317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.85□□□□□ -0.67
COPS3-215ENST00000578317 SBNO1A3KN83 1393 aa10.85□□□□□ -0.67
COPS3-215ENST00000578317 KIF3CO14782 793 aa10.84□□□□□ -0.67
COPS3-215ENST00000578317 MORC1Q86VD1 984 aa10.84□□□□□ -0.67
COPS3-215ENST00000578317 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
COPS3-215ENST00000578317 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
COPS3-215ENST00000578317 NME9Q86XW9 330 aa10.84□□□□□ -0.67
COPS3-215ENST00000578317 COG3Q96JB2 828 aa10.84□□□□□ -0.67
COPS3-215ENST00000578317 GGNBP2Q9H3C7 697 aa10.84□□□□□ -0.67
COPS3-215ENST00000578317 ABTB2Q8N961 1025 aa10.83□□□□□ -0.68
COPS3-215ENST00000578317 SLC24A3Q9HC58 644 aa10.83□□□□□ -0.68
COPS3-215ENST00000578317 ITSN1Q15811 1721 aa10.83□□□□□ -0.68
COPS3-215ENST00000578317 CAMK2BQ13554 666 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms