RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 FYB1O15117 783 aa10.73□□□□□ -0.69
SKA2-203ENST00000578105 ARHGAP23Q9P227 1491 aa10.73□□□□□ -0.69
SKA2-203ENST00000578105 MLECQ14165 292 aa10.72□□□□□ -0.69
SKA2-203ENST00000578105 CENPQQ7L2Z9 268 aaPredicted RBP10.72□□□□□ -0.69
SKA2-203ENST00000578105 CCDC146Q8IYE0 955 aa10.72□□□□□ -0.69
SKA2-203ENST00000578105 TCP11L2Q8N4U5 519 aa10.72□□□□□ -0.69
SKA2-203ENST00000578105 MON2Q7Z3U7 1717 aa10.72□□□□□ -0.69
SKA2-203ENST00000578105 AKAP12Q02952 1782 aa10.71□□□□□ -0.69
SKA2-203ENST00000578105 ADAMTS13Q76LX8 1427 aa10.71□□□□□ -0.69
SKA2-203ENST00000578105 EID1Q9Y6B2 187 aa10.71□□□□□ -0.69
SKA2-203ENST00000578105 ITSN1Q15811 1721 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 CDK12Q9NYV4 1490 aaPredicted RBP10.7□□□□□ -0.7
SKA2-203ENST00000578105 PTCH1Q13635 1447 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 METP08581 1390 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 PIK3R4Q99570 1358 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 MAPK8IP3Q9UPT6 1336 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
SKA2-203ENST00000578105 FCHSD2O94868 740 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 NEFMP07197 916 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
SKA2-203ENST00000578105 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.71e-7■□□□□ 9.5
SKA2-203ENST00000578105 SAFB2Q14151 953 aaKnown RBP eCLIP10.7□□□□□ -0.7
SKA2-203ENST00000578105 ZNF428Q96B54 188 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
SKA2-203ENST00000578105 C3P01024 1663 aa10.69□□□□□ -0.7
SKA2-203ENST00000578105 PLCG2P16885 1265 aa10.69□□□□□ -0.7
SKA2-203ENST00000578105 CALD1Q05682 793 aaKnown RBP10.69□□□□□ -0.7
SKA2-203ENST00000578105 CRBNQ96SW2 442 aa10.69□□□□□ -0.7
SKA2-203ENST00000578105 FER1L4A9Z1Z3 1794 aa10.69□□□□□ -0.7
SKA2-203ENST00000578105 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
SKA2-203ENST00000578105 GGNBP2Q9H3C7 697 aa10.68□□□□□ -0.7
SKA2-203ENST00000578105 TBX22Q9Y458 520 aa10.68□□□□□ -0.7
SKA2-203ENST00000578105 TOPAZ1Q8N9V7 1692 aa10.68□□□□□ -0.7
SKA2-203ENST00000578105 RIMS1Q86UR5 1692 aaKnown RBP10.67□□□□□ -0.7
SKA2-203ENST00000578105 KDM2BQ8NHM5 1336 aa10.67□□□□□ -0.7
SKA2-203ENST00000578105 TNNT2P45379 298 aaPredicted RBP10.67□□□□□ -0.7
SKA2-203ENST00000578105 THEMISQ8N1K5 641 aaPredicted RBP10.67□□□□□ -0.7
SKA2-203ENST00000578105 PLEKHG3A1L390 1219 aa10.66□□□□□ -0.7
SKA2-203ENST00000578105 WAPLQ7Z5K2 1190 aa10.66□□□□□ -0.7
SKA2-203ENST00000578105 NUDT16Q96DE0 195 aaKnown RBP10.66□□□□□ -0.7
SKA2-203ENST00000578105 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
SKA2-203ENST00000578105 LRRC7Q96NW7 1537 aa10.65□□□□□ -0.7
SKA2-203ENST00000578105 SENP3-EIF4A1A0A087X0R7 540 aa10.65□□□□□ -0.7
SKA2-203ENST00000578105 PLIN1O60240 522 aa10.65□□□□□ -0.7
SKA2-203ENST00000578105 ANP32AP39687 249 aaKnown RBP10.65□□□□□ -0.7
SKA2-203ENST00000578105 TMPOP42166 694 aaKnown RBP10.65□□□□□ -0.7
SKA2-203ENST00000578105 LMOD3Q0VAK6 560 aa10.65□□□□□ -0.7
SKA2-203ENST00000578105 COG3Q96JB2 828 aa10.65□□□□□ -0.7
SKA2-203ENST00000578105 ANP32EQ9BTT0 268 aa10.65□□□□□ -0.7
SKA2-203ENST00000578105 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.71
SKA2-203ENST00000578105 RARSP54136 660 aaKnown RBP10.64□□□□□ -0.71
SKA2-203ENST00000578105 TXNDC2Q86VQ3 553 aa10.64□□□□□ -0.71
SKA2-203ENST00000578105 ANKARQ7Z5J8 1434 aa10.64□□□□□ -0.71
SKA2-203ENST00000578105 MAP2P11137 1827 aaKnown RBP10.63□□□□□ -0.71
SKA2-203ENST00000578105 TTC21AQ8NDW8 1320 aa10.63□□□□□ -0.71
SKA2-203ENST00000578105 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
SKA2-203ENST00000578105 CANXP27824 592 aaKnown RBP10.63□□□□□ -0.71
SKA2-203ENST00000578105 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
SKA2-203ENST00000578105 PMFBP1Q8TBY8 1022 aa10.63□□□□□ -0.71
SKA2-203ENST00000578105 POLKQ9UBT6 870 aa10.63□□□□□ -0.71
SKA2-203ENST00000578105 ROBO2Q9HCK4 1378 aa10.63□□□□□ -0.71
SKA2-203ENST00000578105 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
SKA2-203ENST00000578105 ALDH1L2Q3SY69 923 aa10.62□□□□□ -0.71
SKA2-203ENST00000578105 CHMP4BQ9H444 224 aaKnown RBP10.62□□□□□ -0.71
SKA2-203ENST00000578105 NALCNQ8IZF0 1738 aa10.61□□□□□ -0.71
SKA2-203ENST00000578105 XRN1Q8IZH2 1706 aaKnown RBP10.61□□□□□ -0.71
SKA2-203ENST00000578105 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.61□□□□□ -0.71
SKA2-203ENST00000578105 ERICH6Q7L0X2 663 aa10.61□□□□□ -0.71
SKA2-203ENST00000578105 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
SKA2-203ENST00000578105 BACH2Q9BYV9 841 aa10.61□□□□□ -0.71
SKA2-203ENST00000578105 RSPH6AQ9H0K4 717 aa10.61□□□□□ -0.71
SKA2-203ENST00000578105 KIF24Q5T7B8 1368 aa10.61□□□□□ -0.71
SKA2-203ENST00000578105 KIF16BQ96L93 1317 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 ZNF142P52746 1687 aaPredicted RBP10.6□□□□□ -0.71
SKA2-203ENST00000578105 OVOS2A0A0J9YW53 1432 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 USP6P35125 1406 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 OVOS2Q6IE36 1432 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 IPO8O15397 1037 aaKnown RBP10.6□□□□□ -0.71
SKA2-203ENST00000578105 BCAR3O75815 825 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 LTKP29376 864 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
SKA2-203ENST00000578105 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 USP31Q70CQ4 1352 aa10.6□□□□□ -0.71
SKA2-203ENST00000578105 CEP170BQ9Y4F5 1589 aaPredicted RBP10.6□□□□□ -0.71
SKA2-203ENST00000578105 TTC21BQ7Z4L5 1316 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 PDE4AP27815 886 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 IL13P35225 146 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 RIPK4P57078 832 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 NEUROD2Q15784 382 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 NFE2L2Q16236 605 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 USP54Q70EL1 1684 aa10.59□□□□□ -0.71
SKA2-203ENST00000578105 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
SKA2-203ENST00000578105 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
SKA2-203ENST00000578105 GNAI1P63096 354 aa10.58□□□□□ -0.72
SKA2-203ENST00000578105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
SKA2-203ENST00000578105 IPO9Q96P70 1041 aaKnown RBP10.58□□□□□ -0.72
SKA2-203ENST00000578105 RRP7AQ9Y3A4 280 aaKnown RBP10.58□□□□□ -0.72
SKA2-203ENST00000578105 PRR36Q9H6K5 1346 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms