RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
CTDNEP1-212ENST00000576613 COL18A1P39060 1754 aa16.79■□□□□ 0.28
CTDNEP1-212ENST00000576613 WDR17Q8IZU2 1322 aa16.79■□□□□ 0.28
CTDNEP1-212ENST00000576613 CDCA7Q9BWT1 371 aaPredicted RBP16.79■□□□□ 0.28
CTDNEP1-212ENST00000576613 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
CTDNEP1-212ENST00000576613 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
CTDNEP1-212ENST00000576613 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
CTDNEP1-212ENST00000576613 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-212ENST00000576613 CASZ1Q86V15 1759 aa16.77■□□□□ 0.27
CTDNEP1-212ENST00000576613 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
CTDNEP1-212ENST00000576613 BCL9O00512 1426 aa16.76■□□□□ 0.27
CTDNEP1-212ENST00000576613 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
CTDNEP1-212ENST00000576613 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-212ENST00000576613 AXIN2Q9Y2T1 843 aa16.74■□□□□ 0.27
CTDNEP1-212ENST00000576613 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
CTDNEP1-212ENST00000576613 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
CTDNEP1-212ENST00000576613 ARHGEF25Q86VW2 580 aa16.73■□□□□ 0.27
CTDNEP1-212ENST00000576613 MARCH10Q8NA82 808 aaPredicted RBP16.73■□□□□ 0.27
CTDNEP1-212ENST00000576613 CARD10Q9BWT7 1032 aa16.73■□□□□ 0.27
CTDNEP1-212ENST00000576613 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
CTDNEP1-212ENST00000576613 TTC21BQ7Z4L5 1316 aa16.72■□□□□ 0.27
CTDNEP1-212ENST00000576613 ABCC6O95255 1503 aa16.72■□□□□ 0.27
CTDNEP1-212ENST00000576613 SOX12O15370 315 aa16.71■□□□□ 0.27
CTDNEP1-212ENST00000576613 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
CTDNEP1-212ENST00000576613 MYOM1P52179 1685 aa16.7■□□□□ 0.26
CTDNEP1-212ENST00000576613 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
CTDNEP1-212ENST00000576613 L3MBTL2Q969R5 705 aa16.7■□□□□ 0.26
CTDNEP1-212ENST00000576613 NFAT5O94916 1531 aa16.7■□□□□ 0.26
CTDNEP1-212ENST00000576613 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
CTDNEP1-212ENST00000576613 ROCK2O75116 1388 aaKnown RBP16.69■□□□□ 0.26
CTDNEP1-212ENST00000576613 EXOC5O00471 708 aa16.69■□□□□ 0.26
CTDNEP1-212ENST00000576613 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
CTDNEP1-212ENST00000576613 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
CTDNEP1-212ENST00000576613 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-212ENST00000576613 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
CTDNEP1-212ENST00000576613 TXNRD1Q16881 649 aa16.68■□□□□ 0.26
CTDNEP1-212ENST00000576613 PROM2Q8N271 834 aa16.68■□□□□ 0.26
CTDNEP1-212ENST00000576613 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
CTDNEP1-212ENST00000576613 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
CTDNEP1-212ENST00000576613 SLC15A2Q16348 729 aa16.66■□□□□ 0.26
CTDNEP1-212ENST00000576613 PTGER2P43116 358 aa16.65■□□□□ 0.26
CTDNEP1-212ENST00000576613 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
CTDNEP1-212ENST00000576613 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
CTDNEP1-212ENST00000576613 LTN1O94822 1766 aa16.64■□□□□ 0.25
CTDNEP1-212ENST00000576613 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
CTDNEP1-212ENST00000576613 ERBB3P21860 1342 aa16.62■□□□□ 0.25
CTDNEP1-212ENST00000576613 USP31Q70CQ4 1352 aa16.62■□□□□ 0.25
CTDNEP1-212ENST00000576613 SBNO2Q9Y2G9 1366 aa16.62■□□□□ 0.25
CTDNEP1-212ENST00000576613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.25
CTDNEP1-212ENST00000576613 FHDC1Q9C0D6 1143 aaPredicted RBP16.61■□□□□ 0.25
CTDNEP1-212ENST00000576613 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
CTDNEP1-212ENST00000576613 PAPPAQ13219 1627 aa16.6■□□□□ 0.25
CTDNEP1-212ENST00000576613 IL2RBP14784 551 aa16.6■□□□□ 0.25
CTDNEP1-212ENST00000576613 BTAF1O14981 1849 aa16.6■□□□□ 0.25
CTDNEP1-212ENST00000576613 UTRNP46939 3433 aa16.6■□□□□ 0.25
CTDNEP1-212ENST00000576613 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
CTDNEP1-212ENST00000576613 SIN3AQ96ST3 1273 aa16.59■□□□□ 0.25
CTDNEP1-212ENST00000576613 SYT17Q9BSW7 474 aa16.59■□□□□ 0.25
CTDNEP1-212ENST00000576613 NEUROD1Q13562 356 aa16.58■□□□□ 0.24
CTDNEP1-212ENST00000576613 CHD4Q14839 1912 aa16.57■□□□□ 0.24
CTDNEP1-212ENST00000576613 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
CTDNEP1-212ENST00000576613 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
CTDNEP1-212ENST00000576613 NME9Q86XW9 330 aa16.57■□□□□ 0.24
CTDNEP1-212ENST00000576613 SGIP1Q9BQI5 828 aa16.57■□□□□ 0.24
CTDNEP1-212ENST00000576613 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
CTDNEP1-212ENST00000576613 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
CTDNEP1-212ENST00000576613 ZNF784Q8NCA9 323 aaPredicted RBP16.56■□□□□ 0.24
CTDNEP1-212ENST00000576613 TMC1Q8TDI8 760 aa16.56■□□□□ 0.24
CTDNEP1-212ENST00000576613 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
CTDNEP1-212ENST00000576613 ARXQ96QS3 562 aa16.56■□□□□ 0.24
CTDNEP1-212ENST00000576613 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
CTDNEP1-212ENST00000576613 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
CTDNEP1-212ENST00000576613 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
CTDNEP1-212ENST00000576613 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
CTDNEP1-212ENST00000576613 CARD11Q9BXL7 1154 aa16.53■□□□□ 0.24
CTDNEP1-212ENST00000576613 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
CTDNEP1-212ENST00000576613 SLC27A3Q5K4L6 730 aa16.51■□□□□ 0.23
CTDNEP1-212ENST00000576613 SLC12A5Q9H2X9 1139 aa16.51■□□□□ 0.23
CTDNEP1-212ENST00000576613 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
CTDNEP1-212ENST00000576613 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
CTDNEP1-212ENST00000576613 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
CTDNEP1-212ENST00000576613 POLD1P28340 1107 aa16.49■□□□□ 0.23
CTDNEP1-212ENST00000576613 DDX54Q8TDD1 881 aaKnown RBP16.49■□□□□ 0.23
CTDNEP1-212ENST00000576613 IP6K1Q92551 441 aa16.49■□□□□ 0.23
CTDNEP1-212ENST00000576613 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
CTDNEP1-212ENST00000576613 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
CTDNEP1-212ENST00000576613 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
CTDNEP1-212ENST00000576613 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
CTDNEP1-212ENST00000576613 GPR162Q16538 588 aa16.47■□□□□ 0.23
CTDNEP1-212ENST00000576613 LTV1Q96GA3 475 aaPredicted RBP16.47■□□□□ 0.23
CTDNEP1-212ENST00000576613 LY75O60449 1722 aa16.46■□□□□ 0.23
CTDNEP1-212ENST00000576613 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
CTDNEP1-212ENST00000576613 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
CTDNEP1-212ENST00000576613 TFCP2L1Q9NZI6 479 aa16.46■□□□□ 0.23
CTDNEP1-212ENST00000576613 TUBGCP6Q96RT7 1819 aa16.46■□□□□ 0.23
CTDNEP1-212ENST00000576613 ANKRD36BQ8N2N9 1353 aa16.46■□□□□ 0.23
CTDNEP1-212ENST00000576613 COG3Q96JB2 828 aa16.45■□□□□ 0.22
CTDNEP1-212ENST00000576613 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
CTDNEP1-212ENST00000576613 TONSLQ96HA7 1378 aa16.44■□□□□ 0.22
CTDNEP1-212ENST00000576613 SHANK3Q9BYB0 1731 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms