RNA–Protein interactions for RNA: ENST00000575231.1

AC040162.1-201, humanhuman

TSL 2

Gene AC040162.1, Length 5,685 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040162.1-201ENST00000575231 SMTNL1A8MU46 457 aa16.85■□□□□ 0.29
AC040162.1-201ENST00000575231 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
AC040162.1-201ENST00000575231 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 WASHC2CQ9Y4E1 1318 aa16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 EZRP15311 586 aaKnown RBP16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 SURF6O75683 361 aaKnown RBP16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 GTF2F1P35269 517 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 STIM1Q13586 685 aa16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 TICAM2Q86XR7 235 aa16.84■□□□□ 0.29
AC040162.1-201ENST00000575231 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.29
AC040162.1-201ENST00000575231 POLR3GO15318 223 aaPredicted RBP16.83■□□□□ 0.29
AC040162.1-201ENST00000575231 IBSPP21815 317 aaPredicted RBP16.83■□□□□ 0.29
AC040162.1-201ENST00000575231 MAP9Q49MG5 647 aa16.83■□□□□ 0.29
AC040162.1-201ENST00000575231 ARHGAP29Q52LW3 1261 aa16.83■□□□□ 0.29
AC040162.1-201ENST00000575231 DYNC1I1O14576 645 aa16.83■□□□□ 0.28
AC040162.1-201ENST00000575231 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
AC040162.1-201ENST00000575231 C1orf115Q9H7X2 142 aa16.83■□□□□ 0.28
AC040162.1-201ENST00000575231 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 MICALCLQ6ZW33 695 aa16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 IPO4Q8TEX9 1081 aaKnown RBP16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 ZSCAN12O43309 604 aa16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 STK3Q13188 491 aa16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 CFAP45Q9UL16 551 aa16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 MIA2Q96PC5 1412 aa16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 SLC26A8Q96RN1 970 aa16.82■□□□□ 0.28
AC040162.1-201ENST00000575231 TIGD1Q96MW7 591 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 BCAR3O75815 825 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 MCM5P33992 734 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 HMOX1P09601 288 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 MCM3P25205 808 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 SFPQP23246 707 aaKnown RBP eCLIP16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 CASQ1P31415 396 aa16.81■□□□□ 0.28
AC040162.1-201ENST00000575231 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
AC040162.1-201ENST00000575231 RIC3Q7Z5B4 369 aa16.8■□□□□ 0.28
AC040162.1-201ENST00000575231 ZSCAN31Q96LW9 406 aaPredicted RBP16.8■□□□□ 0.28
AC040162.1-201ENST00000575231 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
AC040162.1-201ENST00000575231 NOB1Q9ULX3 412 aaKnown RBP16.8■□□□□ 0.28
AC040162.1-201ENST00000575231 MAP2K1Q02750 393 aaPredicted RBP16.8■□□□□ 0.28
AC040162.1-201ENST00000575231 TNNT1P13805 278 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 JAKMIP3Q5VZ66 844 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 LRRC9Q6ZRR7 1453 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 URI1O94763 535 aaPredicted RBP16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 CFTRP13569 1480 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 CCDC183Q5T5S1 534 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 ERC1Q8IUD2 1116 aa16.79■□□□□ 0.28
AC040162.1-201ENST00000575231 CUX1P39880 1505 aa16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 FYB1O15117 783 aa16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 CFAP100Q494V2 611 aa16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 RNF187Q5TA31 235 aaPredicted RBP16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 TAF4BQ92750 862 aa16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
AC040162.1-201ENST00000575231 GNAI2P04899 355 aa16.77■□□□□ 0.28
AC040162.1-201ENST00000575231 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.28
AC040162.1-201ENST00000575231 PTPRGP23470 1445 aa16.77■□□□□ 0.27
AC040162.1-201ENST00000575231 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.27
AC040162.1-201ENST00000575231 GTF2A1P52655 376 aaPredicted RBP16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 PPP2R1AP30153 589 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 GOLGA6L10A0A0M3HER8 536 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 KIF5CO60282 957 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 PRIMPOLQ96LW4 560 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 CAMK4Q16566 473 aa16.76■□□□□ 0.27
AC040162.1-201ENST00000575231 CCDC30Q5VVM6 783 aa16.75■□□□□ 0.27
AC040162.1-201ENST00000575231 CLIP2Q9UDT6 1046 aa16.75■□□□□ 0.27
AC040162.1-201ENST00000575231 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
AC040162.1-201ENST00000575231 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.27
AC040162.1-201ENST00000575231 BMS1Q14692 1282 aaKnown RBP16.75■□□□□ 0.27
AC040162.1-201ENST00000575231 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 AIMP1Q12904 312 aaKnown RBP16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 C16orf45Q96MC5 204 aaPredicted RBP16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 TRIM22Q8IYM9 498 aa16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 NEMFO60524 1076 aa16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 MTMR7Q9Y216 660 aa16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
AC040162.1-201ENST00000575231 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
AC040162.1-201ENST00000575231 CASKIN1Q8WXD9 1431 aa16.73■□□□□ 0.27
AC040162.1-201ENST00000575231 BLOC1S2Q6QNY1 142 aa16.73■□□□□ 0.27
AC040162.1-201ENST00000575231 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
AC040162.1-201ENST00000575231 LMAN1P49257 510 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1326.4 ms