RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 ZHX3Q9H4I2 956 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 MAP4K4O95819 1239 aaPredicted RBP20.15■□□□□ 0.82
E4F1-209ENST00000569796 CCP110O43303 1012 aa20.15■□□□□ 0.82
E4F1-209ENST00000569796 PIP4K2BP78356 416 aa20.15■□□□□ 0.82
E4F1-209ENST00000569796 FIBPO43427 364 aa20.14■□□□□ 0.82
E4F1-209ENST00000569796 CAVIN1Q6NZI2 390 aaKnown RBP20.14■□□□□ 0.82
E4F1-209ENST00000569796 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.82
E4F1-209ENST00000569796 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.82
E4F1-209ENST00000569796 CABP1Q9NZU7 370 aa20.14■□□□□ 0.81
E4F1-209ENST00000569796 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
E4F1-209ENST00000569796 AXDND1Q5T1B0 1012 aaPredicted RBP20.14■□□□□ 0.81
E4F1-209ENST00000569796 HMGN5P82970 282 aaKnown RBP20.13■□□□□ 0.81
E4F1-209ENST00000569796 NUP133Q8WUM0 1156 aa20.13■□□□□ 0.81
E4F1-209ENST00000569796 CCDC69A6NI79 296 aa20.13■□□□□ 0.81
E4F1-209ENST00000569796 CCDC57Q2TAC2 916 aa20.13■□□□□ 0.81
E4F1-209ENST00000569796 GCC1Q96CN9 775 aa20.13■□□□□ 0.81
E4F1-209ENST00000569796 PDCL3Q9H2J4 239 aa20.13■□□□□ 0.81
E4F1-209ENST00000569796 TRIM22Q8IYM9 498 aa20.12■□□□□ 0.81
E4F1-209ENST00000569796 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
E4F1-209ENST00000569796 SLC12A5Q9H2X9 1139 aa20.12■□□□□ 0.81
E4F1-209ENST00000569796 PRPF40AO75400 957 aaKnown RBP20.11■□□□□ 0.81
E4F1-209ENST00000569796 ZSCAN29Q8IWY8 852 aaPredicted RBP20.11■□□□□ 0.81
E4F1-209ENST00000569796 PRDM11Q9NQV5 511 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 FKBP4Q02790 459 aaKnown RBP eCLIP20.11■□□□□ 0.81
E4F1-209ENST00000569796 TRAK2O60296 914 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 MBD3O95983 291 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 SOGA3Q5TF21 947 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 CCT4P50991 539 aaKnown RBP20.11■□□□□ 0.81
E4F1-209ENST00000569796 BICDL1Q6ZP65 573 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 TSPY26PQ9H489 355 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 CYP46A1Q9Y6A2 500 aa20.11■□□□□ 0.81
E4F1-209ENST00000569796 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
E4F1-209ENST00000569796 IL27Q8NEV9 243 aa20.1■□□□□ 0.81
E4F1-209ENST00000569796 ZSCAN25Q6NSZ9 544 aa20.1■□□□□ 0.81
E4F1-209ENST00000569796 RABEP1Q15276 862 aa20.1■□□□□ 0.81
E4F1-209ENST00000569796 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
E4F1-209ENST00000569796 NCOA2Q15596 1464 aa20.09■□□□□ 0.81
E4F1-209ENST00000569796 XPCQ01831 940 aaPredicted RBP20.09■□□□□ 0.81
E4F1-209ENST00000569796 KIAA0754O94854 1291 aa20.08■□□□□ 0.81
E4F1-209ENST00000569796 ANKRD1Q15327 319 aa20.08■□□□□ 0.81
E4F1-209ENST00000569796 NBPF1Q3BBV0 1214 aa20.08■□□□□ 0.81
E4F1-209ENST00000569796 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.8
E4F1-209ENST00000569796 TANGO6Q9C0B7 1094 aa20.08■□□□□ 0.8
E4F1-209ENST00000569796 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.8
E4F1-209ENST00000569796 ZNHIT6Q9NWK9 470 aaKnown RBP20.08■□□□□ 0.8
E4F1-209ENST00000569796 CT47B1P0C2W7 299 aaPredicted RBP20.07■□□□□ 0.8
E4F1-209ENST00000569796 DACH1Q9UI36 760 aa20.07■□□□□ 0.8
E4F1-209ENST00000569796 AACSQ86V21 672 aa20.07■□□□□ 0.8
E4F1-209ENST00000569796 STIM1Q13586 685 aa20.06■□□□□ 0.8
E4F1-209ENST00000569796 AEBP1Q8IUX7 1158 aa20.06■□□□□ 0.8
E4F1-209ENST00000569796 SERPINC1P01008 464 aa20.06■□□□□ 0.8
E4F1-209ENST00000569796 RAI14Q9P0K7 980 aa20.06■□□□□ 0.8
E4F1-209ENST00000569796 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
E4F1-209ENST00000569796 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 BTBD11A6QL63 1104 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 ME1P48163 572 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 TDO2P48775 406 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 BCAR3O75815 825 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 ERLIN2O94905 339 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 CCDC85AQ96PX6 553 aaPredicted RBP20.05■□□□□ 0.8
E4F1-209ENST00000569796 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
E4F1-209ENST00000569796 MPHOSPH10O00566 681 aaKnown RBP20.05■□□□□ 0.8
E4F1-209ENST00000569796 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
E4F1-209ENST00000569796 SSBP05455 408 aaKnown RBP eCLIP20.04■□□□□ 0.8
E4F1-209ENST00000569796 SPC24Q8NBT2 197 aa20.04■□□□□ 0.8
E4F1-209ENST00000569796 LUC7LQ9NQ29 371 aaKnown RBP20.04■□□□□ 0.8
E4F1-209ENST00000569796 DEF6Q9H4E7 631 aa20.04■□□□□ 0.8
E4F1-209ENST00000569796 NOL7Q9UMY1 257 aaKnown RBP20.04■□□□□ 0.8
E4F1-209ENST00000569796 PRG4Q92954 1404 aaPredicted RBP20.04■□□□□ 0.8
E4F1-209ENST00000569796 NEFHP12036 1026 aa20.03■□□□□ 0.8
E4F1-209ENST00000569796 DHX8Q14562 1220 aaKnown RBP20.03■□□□□ 0.8
E4F1-209ENST00000569796 ZRSR2Q15696 482 aaKnown RBP20.03■□□□□ 0.8
E4F1-209ENST00000569796 TXLNBQ8N3L3 684 aa20.03■□□□□ 0.8
E4F1-209ENST00000569796 PIBF1Q8WXW3 757 aa20.03■□□□□ 0.8
E4F1-209ENST00000569796 SRGAP3O43295 1099 aa20.02■□□□□ 0.8
E4F1-209ENST00000569796 UBAC1Q9BSL1 405 aa20.02■□□□□ 0.8
E4F1-209ENST00000569796 GOLGA6L7A0A1B0GV03 622 aa20.02■□□□□ 0.8
E4F1-209ENST00000569796 IBSPP21815 317 aaPredicted RBP20.02■□□□□ 0.8
E4F1-209ENST00000569796 CEP126Q9P2H0 1117 aa20.02■□□□□ 0.8
E4F1-209ENST00000569796 ZC3H6P61129 1189 aaKnown RBP20.01■□□□□ 0.79
E4F1-209ENST00000569796 LRP2BPQ9P2M1 347 aa20.01■□□□□ 0.79
E4F1-209ENST00000569796 PPFIBP1Q86W92 1011 aa20.01■□□□□ 0.79
E4F1-209ENST00000569796 UQCRHLA0A096LP55 91 aa20.01■□□□□ 0.79
E4F1-209ENST00000569796 UQCRHP07919 91 aa20.01■□□□□ 0.79
E4F1-209ENST00000569796 ZNF76P36508 570 aa20■□□□□ 0.79
E4F1-209ENST00000569796 USP8P40818 1118 aa20■□□□□ 0.79
E4F1-209ENST00000569796 MATR3P43243 847 aaKnown RBP eCLIP20■□□□□ 0.79
E4F1-209ENST00000569796 PDE3AQ14432 1141 aa20■□□□□ 0.79
E4F1-209ENST00000569796 CASKIN1Q8WXD9 1431 aa20■□□□□ 0.79
E4F1-209ENST00000569796 GOLGA6L10A6NI86 522 aa20■□□□□ 0.79
E4F1-209ENST00000569796 CDKL5O76039 1030 aa20■□□□□ 0.79
E4F1-209ENST00000569796 IGHMBP2P38935 993 aaKnown RBP20■□□□□ 0.79
E4F1-209ENST00000569796 TNMDQ9H2S6 317 aa20■□□□□ 0.79
E4F1-209ENST00000569796 PRKCSHP14314 528 aaPredicted RBP19.99■□□□□ 0.79
E4F1-209ENST00000569796 ANKRD18AQ8IVF6 992 aa19.99■□□□□ 0.79
E4F1-209ENST00000569796 SEPT11Q9NVA2 429 aaKnown RBP19.99■□□□□ 0.79
E4F1-209ENST00000569796 RRP9O43818 475 aaKnown RBP19.99■□□□□ 0.79
E4F1-209ENST00000569796 USP5P45974 858 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms