RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 IFFO2Q5TF58 517 aa9.48□□□□□ -0.89
UBFD1-204ENST00000565634 CCDC125Q86Z20 511 aa9.48□□□□□ -0.89
UBFD1-204ENST00000565634 COL9A1P20849 921 aa9.47□□□□□ -0.89
UBFD1-204ENST00000565634 CAMK2BQ13554 666 aa9.47□□□□□ -0.89
UBFD1-204ENST00000565634 AMOTL2Q9Y2J4 779 aa9.47□□□□□ -0.89
UBFD1-204ENST00000565634 LRP5O75197 1615 aa9.46□□□□□ -0.89
UBFD1-204ENST00000565634 RSPH4AQ5TD94 716 aa9.46□□□□□ -0.9
UBFD1-204ENST00000565634 THSD4Q6ZMP0 1018 aa9.46□□□□□ -0.9
UBFD1-204ENST00000565634 SETD5Q9C0A6 1442 aa9.46□□□□□ -0.9
UBFD1-204ENST00000565634 SF3B2Q13435 895 aaKnown RBP9.45□□□□□ -0.9
UBFD1-204ENST00000565634 R3HDM1Q15032 1099 aaKnown RBP9.45□□□□□ -0.9
UBFD1-204ENST00000565634 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
UBFD1-204ENST00000565634 TBX22Q9Y458 520 aa9.45□□□□□ -0.9
UBFD1-204ENST00000565634 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
UBFD1-204ENST00000565634 NHSL1Q5SYE7 1610 aa9.45□□□□□ -0.9
UBFD1-204ENST00000565634 PROX2Q3B8N5 592 aa9.44□□□□□ -0.9
UBFD1-204ENST00000565634 FNBP4Q8N3X1 1017 aaPredicted RBP9.44□□□□□ -0.9
UBFD1-204ENST00000565634 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
UBFD1-204ENST00000565634 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
UBFD1-204ENST00000565634 ATRNO75882 1429 aa9.44□□□□□ -0.9
UBFD1-204ENST00000565634 PTPRUQ92729 1446 aa9.43□□□□□ -0.9
UBFD1-204ENST00000565634 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
UBFD1-204ENST00000565634 DPYSL4O14531 572 aa9.43□□□□□ -0.9
UBFD1-204ENST00000565634 PHF14O94880 888 aa9.43□□□□□ -0.9
UBFD1-204ENST00000565634 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
UBFD1-204ENST00000565634 TYW1BQ6NUM6 668 aa9.43□□□□□ -0.9
UBFD1-204ENST00000565634 WNT2BQ93097 391 aa9.43□□□□□ -0.9
UBFD1-204ENST00000565634 RIMS2Q9UQ26 1411 aa9.42□□□□□ -0.9
UBFD1-204ENST00000565634 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
UBFD1-204ENST00000565634 XPCQ01831 940 aaPredicted RBP9.42□□□□□ -0.9
UBFD1-204ENST00000565634 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
UBFD1-204ENST00000565634 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
UBFD1-204ENST00000565634 GCC2Q8IWJ2 1684 aa9.42□□□□□ -0.9
UBFD1-204ENST00000565634 BLMP54132 1417 aaPredicted RBP9.41□□□□□ -0.9
UBFD1-204ENST00000565634 MST1RQ04912 1400 aa9.41□□□□□ -0.9
UBFD1-204ENST00000565634 ARHGAP31Q2M1Z3 1444 aa9.41□□□□□ -0.9
UBFD1-204ENST00000565634 PLEKHG1Q9ULL1 1385 aa9.41□□□□□ -0.9
UBFD1-204ENST00000565634 GOLGA8CPA6NN73 597 aa9.41□□□□□ -0.9
UBFD1-204ENST00000565634 FBXW7Q969H0 707 aa9.41□□□□□ -0.9
UBFD1-204ENST00000565634 EIF2AK4Q9P2K8 1649 aaKnown RBP9.41□□□□□ -0.9
UBFD1-204ENST00000565634 BCL9LQ86UU0 1499 aa9.4□□□□□ -0.9
UBFD1-204ENST00000565634 ADAMTS13Q76LX8 1427 aa9.4□□□□□ -0.9
UBFD1-204ENST00000565634 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
UBFD1-204ENST00000565634 SPRYD3Q8NCJ5 442 aa9.4□□□□□ -0.9
UBFD1-204ENST00000565634 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
UBFD1-204ENST00000565634 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
UBFD1-204ENST00000565634 ARHGEF5Q12774 1597 aa9.4□□□□□ -0.9
UBFD1-204ENST00000565634 ADGRB3O60242 1522 aa9.39□□□□□ -0.91
UBFD1-204ENST00000565634 ZFYVE9O95405 1425 aa9.39□□□□□ -0.91
UBFD1-204ENST00000565634 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
UBFD1-204ENST00000565634 EHBP1L1Q8N3D4 1523 aa9.38□□□□□ -0.91
UBFD1-204ENST00000565634 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
UBFD1-204ENST00000565634 MARF1Q9Y4F3 1742 aaKnown RBP9.38□□□□□ -0.91
UBFD1-204ENST00000565634 CAMTA1Q9Y6Y1 1673 aa9.37□□□□□ -0.91
UBFD1-204ENST00000565634 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
UBFD1-204ENST00000565634 EPAS1Q99814 870 aa9.37□□□□□ -0.91
UBFD1-204ENST00000565634 KIAA1468Q9P260 1216 aa9.37□□□□□ -0.91
UBFD1-204ENST00000565634 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
UBFD1-204ENST00000565634 GLI3P10071 1580 aa9.37□□□□□ -0.91
UBFD1-204ENST00000565634 DUOX2Q9NRD8 1548 aa9.36□□□□□ -0.91
UBFD1-204ENST00000565634 A0A0G2JS52 829 aa9.36□□□□□ -0.91
UBFD1-204ENST00000565634 MYT1Q01538 1121 aa9.36□□□□□ -0.91
UBFD1-204ENST00000565634 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
UBFD1-204ENST00000565634 SLC52A1Q9NWF4 448 aa9.36□□□□□ -0.91
UBFD1-204ENST00000565634 KANK1Q14678 1352 aa9.36□□□□□ -0.91
UBFD1-204ENST00000565634 KIF15Q9NS87 1388 aa9.36□□□□□ -0.91
UBFD1-204ENST00000565634 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
UBFD1-204ENST00000565634 NOS1P29475 1434 aa9.35□□□□□ -0.91
UBFD1-204ENST00000565634 BAG6P46379 1132 aa9.35□□□□□ -0.91
UBFD1-204ENST00000565634 KRT27Q7Z3Y8 459 aa9.35□□□□□ -0.91
UBFD1-204ENST00000565634 DDX12PQ92771 950 aa9.35□□□□□ -0.91
UBFD1-204ENST00000565634 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
UBFD1-204ENST00000565634 SOS2Q07890 1332 aaPredicted RBP9.34□□□□□ -0.91
UBFD1-204ENST00000565634 NUTM2FA1L443 756 aa9.34□□□□□ -0.91
UBFD1-204ENST00000565634 UNC5CLQ8IV45 518 aa9.34□□□□□ -0.91
UBFD1-204ENST00000565634 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.92
UBFD1-204ENST00000565634 ADGRL3Q9HAR2 1447 aa9.33□□□□□ -0.92
UBFD1-204ENST00000565634 FAM50AQ14320 339 aaKnown RBP9.33□□□□□ -0.92
UBFD1-204ENST00000565634 ZNF784Q8NCA9 323 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-204ENST00000565634 PTCH1Q13635 1447 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 MYOM3Q5VTT5 1437 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 TRPM2O94759 1503 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 FOXO3O43524 673 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 ONECUT3O60422 494 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-204ENST00000565634 ITGAEP38570 1179 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 BCAMP50895 628 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 LAPTM4BQ86VI4 370 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBFD1-204ENST00000565634 ANKK1Q8NFD2 765 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 CABLES1Q8TDN4 633 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 METP08581 1390 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 C1orf167Q5SNV9 1468 aa9.32□□□□□ -0.92
UBFD1-204ENST00000565634 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
UBFD1-204ENST00000565634 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
UBFD1-204ENST00000565634 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
UBFD1-204ENST00000565634 C1QTNF8P60827 252 aa9.3□□□□□ -0.92
UBFD1-204ENST00000565634 ZFRQ96KR1 1074 aaKnown RBP9.3□□□□□ -0.92
UBFD1-204ENST00000565634 PPP1R1BQ9UD71 204 aaPredicted RBP9.3□□□□□ -0.92
UBFD1-204ENST00000565634 SEPT9Q9UHD8 586 aaPredicted RBP9.3□□□□□ -0.92
UBFD1-204ENST00000565634 PDIA6Q15084 440 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms