RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-205ENST00000565452 ATP7BP35670 1465 aa13.39□□□□□ -0.27
VPS9D1-205ENST00000565452 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
VPS9D1-205ENST00000565452 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
VPS9D1-205ENST00000565452 USP19O94966 1318 aa13.38□□□□□ -0.27
VPS9D1-205ENST00000565452 AATKQ6ZMQ8 1374 aa13.36□□□□□ -0.27
VPS9D1-205ENST00000565452 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-205ENST00000565452 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
VPS9D1-205ENST00000565452 NLRP6P59044 892 aa13.34□□□□□ -0.27
VPS9D1-205ENST00000565452 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
VPS9D1-205ENST00000565452 RGPD3A6NKT7 1758 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-205ENST00000565452 RGPD4Q7Z3J3 1758 aa13.34□□□□□ -0.27
VPS9D1-205ENST00000565452 NLGN2Q8NFZ4 835 aa13.33□□□□□ -0.28
VPS9D1-205ENST00000565452 WDR17Q8IZU2 1322 aa13.33□□□□□ -0.28
VPS9D1-205ENST00000565452 CRYBG1Q9Y4K1 1723 aa13.33□□□□□ -0.28
VPS9D1-205ENST00000565452 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
VPS9D1-205ENST00000565452 YBX3P16989 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
VPS9D1-205ENST00000565452 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
VPS9D1-205ENST00000565452 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
VPS9D1-205ENST00000565452 PARP4Q9UKK3 1724 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-205ENST00000565452 PEAK1Q9H792 1746 aa13.31□□□□□ -0.28
VPS9D1-205ENST00000565452 APLP1P51693 650 aa13.31□□□□□ -0.28
VPS9D1-205ENST00000565452 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
VPS9D1-205ENST00000565452 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
VPS9D1-205ENST00000565452 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
VPS9D1-205ENST00000565452 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
VPS9D1-205ENST00000565452 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
VPS9D1-205ENST00000565452 TFCP2L1Q9NZI6 479 aa13.3□□□□□ -0.28
VPS9D1-205ENST00000565452 SLC27A3Q5K4L6 730 aa13.29□□□□□ -0.28
VPS9D1-205ENST00000565452 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-205ENST00000565452 LRRC4BQ9NT99 713 aa13.29□□□□□ -0.28
VPS9D1-205ENST00000565452 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-205ENST00000565452 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-205ENST00000565452 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
VPS9D1-205ENST00000565452 LMO7Q8WWI1 1683 aa13.28□□□□□ -0.28
VPS9D1-205ENST00000565452 DNAJC5GQ8N7S2 189 aa13.27□□□□□ -0.29
VPS9D1-205ENST00000565452 KCNH5Q8NCM2 988 aa13.27□□□□□ -0.29
VPS9D1-205ENST00000565452 SRPK2P78362 688 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-205ENST00000565452 ARHGEF25Q86VW2 580 aa13.26□□□□□ -0.29
VPS9D1-205ENST00000565452 SBF2Q86WG5 1849 aa13.26□□□□□ -0.29
VPS9D1-205ENST00000565452 SHANK3Q9BYB0 1731 aa13.26□□□□□ -0.29
VPS9D1-205ENST00000565452 GOLGB1Q14789 3259 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-205ENST00000565452 ADGRB1O14514 1584 aa13.25□□□□□ -0.29
VPS9D1-205ENST00000565452 USP6P35125 1406 aa13.25□□□□□ -0.29
VPS9D1-205ENST00000565452 PNPLA7Q6ZV29 1317 aa13.25□□□□□ -0.29
VPS9D1-205ENST00000565452 MSH5O43196 834 aa13.25□□□□□ -0.29
VPS9D1-205ENST00000565452 CAPN15O75808 1086 aa13.25□□□□□ -0.29
VPS9D1-205ENST00000565452 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
VPS9D1-205ENST00000565452 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
VPS9D1-205ENST00000565452 COL13A1Q5TAT6 717 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-205ENST00000565452 KIF3CO14782 793 aa13.22□□□□□ -0.29
VPS9D1-205ENST00000565452 PRELPP51888 382 aa13.22□□□□□ -0.29
VPS9D1-205ENST00000565452 CABP1Q9NZU7 370 aa13.22□□□□□ -0.29
VPS9D1-205ENST00000565452 LRRC37A3O60309 1634 aa13.21□□□□□ -0.29
VPS9D1-205ENST00000565452 IL2RBP14784 551 aa13.21□□□□□ -0.29
VPS9D1-205ENST00000565452 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
VPS9D1-205ENST00000565452 TOMM70O94826 608 aa13.2□□□□□ -0.3
VPS9D1-205ENST00000565452 TNS4Q8IZW8 715 aa13.2□□□□□ -0.3
VPS9D1-205ENST00000565452 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
VPS9D1-205ENST00000565452 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
VPS9D1-205ENST00000565452 SOX12O15370 315 aa13.19□□□□□ -0.3
VPS9D1-205ENST00000565452 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-205ENST00000565452 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-205ENST00000565452 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
VPS9D1-205ENST00000565452 ADCY9O60503 1353 aa13.18□□□□□ -0.3
VPS9D1-205ENST00000565452 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
VPS9D1-205ENST00000565452 KCNQ4P56696 695 aa13.17□□□□□ -0.3
VPS9D1-205ENST00000565452 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-205ENST00000565452 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-205ENST00000565452 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
VPS9D1-205ENST00000565452 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-205ENST00000565452 SYTL4Q96C24 671 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-205ENST00000565452 PRIM1P49642 420 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-205ENST00000565452 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
VPS9D1-205ENST00000565452 JMYQ8N9B5 988 aa13.15□□□□□ -0.3
VPS9D1-205ENST00000565452 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
VPS9D1-205ENST00000565452 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-205ENST00000565452 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
VPS9D1-205ENST00000565452 SLIT3O75094 1523 aa13.13□□□□□ -0.31
VPS9D1-205ENST00000565452 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
VPS9D1-205ENST00000565452 AKAP12Q02952 1782 aa13.12□□□□□ -0.31
VPS9D1-205ENST00000565452 C16orf71Q8IYS4 520 aaPredicted RBP13.12□□□□□ -0.31
VPS9D1-205ENST00000565452 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
VPS9D1-205ENST00000565452 CENPJQ9HC77 1338 aaPredicted RBP13.12□□□□□ -0.31
VPS9D1-205ENST00000565452 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
VPS9D1-205ENST00000565452 COL18A1P39060 1754 aa13.1□□□□□ -0.31
VPS9D1-205ENST00000565452 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
VPS9D1-205ENST00000565452 TOPAZ1Q8N9V7 1692 aa13.1□□□□□ -0.31
VPS9D1-205ENST00000565452 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-205ENST00000565452 ERBB3P21860 1342 aa13.1□□□□□ -0.31
VPS9D1-205ENST00000565452 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
VPS9D1-205ENST00000565452 FSTL1Q12841 308 aa13.09□□□□□ -0.31
VPS9D1-205ENST00000565452 WWC3Q9ULE0 1092 aa13.09□□□□□ -0.31
VPS9D1-205ENST00000565452 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
VPS9D1-205ENST00000565452 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.32
VPS9D1-205ENST00000565452 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
VPS9D1-205ENST00000565452 ABCC6O95255 1503 aa13.08□□□□□ -0.32
VPS9D1-205ENST00000565452 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-205ENST00000565452 SLC34A2O95436 690 aa13.07□□□□□ -0.32
VPS9D1-205ENST00000565452 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms