RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CRYBG1Q9Y4K1 1723 aa9.9□□□□□ -0.83
MAP1LC3B-205ENST00000564638 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.83
MAP1LC3B-205ENST00000564638 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.83
MAP1LC3B-205ENST00000564638 TTC21AQ8NDW8 1320 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 ZBTB7CA1YPR0 619 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 SOX12O15370 315 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 PPP2R1AP30153 589 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 NGLY1Q96IV0 654 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 NUDCQ9Y266 331 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 ANKRD26Q9UPS8 1709 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 SSH2Q76I76 1423 aa9.89□□□□□ -0.83
MAP1LC3B-205ENST00000564638 NME9Q86XW9 330 aa9.88□□□□□ -0.83
MAP1LC3B-205ENST00000564638 KIF20BQ96Q89 1820 aa9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 PSDA5PKW4 1024 aaPredicted RBP9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 WDR43Q15061 677 aaKnown RBP eCLIP9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 ERICH6BQ5W0A0 696 aa9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 PRDM11Q9NQV5 511 aa9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 USP21Q9UK80 565 aa9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 NSD2O96028 1365 aa9.87□□□□□ -0.83
MAP1LC3B-205ENST00000564638 USP19O94966 1318 aa9.86□□□□□ -0.83
MAP1LC3B-205ENST00000564638 PDE3BQ13370 1112 aa9.86□□□□□ -0.83
MAP1LC3B-205ENST00000564638 TRPC5Q9UL62 973 aaPredicted RBP9.86□□□□□ -0.83
MAP1LC3B-205ENST00000564638 PLCH1Q4KWH8 1693 aa9.86□□□□□ -0.83
MAP1LC3B-205ENST00000564638 GCP02774 474 aa9.85□□□□□ -0.83
MAP1LC3B-205ENST00000564638 CHRNA2Q15822 529 aa9.85□□□□□ -0.83
MAP1LC3B-205ENST00000564638 SLIT3O75094 1523 aa9.85□□□□□ -0.83
MAP1LC3B-205ENST00000564638 KIAA0232Q92628 1395 aa9.85□□□□□ -0.83
MAP1LC3B-205ENST00000564638 CGNL1Q0VF96 1302 aa9.84□□□□□ -0.83
MAP1LC3B-205ENST00000564638 COL14A1Q05707 1796 aaKnown RBP9.84□□□□□ -0.83
MAP1LC3B-205ENST00000564638 YY1P25490 414 aa9.84□□□□□ -0.83
MAP1LC3B-205ENST00000564638 COG3Q96JB2 828 aa9.84□□□□□ -0.83
MAP1LC3B-205ENST00000564638 CARD14Q9BXL6 1004 aa9.84□□□□□ -0.83
MAP1LC3B-205ENST00000564638 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
MAP1LC3B-205ENST00000564638 BRWD3Q6RI45 1802 aa9.84□□□□□ -0.83
MAP1LC3B-205ENST00000564638 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
MAP1LC3B-205ENST00000564638 FAM83GA6ND36 823 aa9.83□□□□□ -0.84
MAP1LC3B-205ENST00000564638 USP31Q70CQ4 1352 aa9.83□□□□□ -0.84
MAP1LC3B-205ENST00000564638 GLI3P10071 1580 aa9.83□□□□□ -0.84
MAP1LC3B-205ENST00000564638 OVOS2A0A0J9YW53 1432 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 OVOS2Q6IE36 1432 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 NWD2Q9ULI1 1742 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 MORC1Q86VD1 984 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 KCNH5Q8NCM2 988 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 BTG4Q9NY30 223 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 CCDC9Q9Y3X0 531 aaKnown RBP9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 LTN1O94822 1766 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 SLIT2O94813 1529 aa9.82□□□□□ -0.84
MAP1LC3B-205ENST00000564638 FYB1O15117 783 aa9.81□□□□□ -0.84
MAP1LC3B-205ENST00000564638 UNC5CLQ8IV45 518 aa9.81□□□□□ -0.84
MAP1LC3B-205ENST00000564638 STRN4Q9NRL3 753 aa9.81□□□□□ -0.84
MAP1LC3B-205ENST00000564638 NRAPQ86VF7 1730 aa9.81□□□□□ -0.84
MAP1LC3B-205ENST00000564638 NFAT5O94916 1531 aa9.81□□□□□ -0.84
MAP1LC3B-205ENST00000564638 RGPD5Q99666 1765 aa9.8□□□□□ -0.84
MAP1LC3B-205ENST00000564638 CPDO75976 1380 aa9.8□□□□□ -0.84
MAP1LC3B-205ENST00000564638 EVA1CP58658 441 aa9.8□□□□□ -0.84
MAP1LC3B-205ENST00000564638 IRX6P78412 446 aaPredicted RBP9.8□□□□□ -0.84
MAP1LC3B-205ENST00000564638 GJD4Q96KN9 370 aaPredicted RBP9.8□□□□□ -0.84
MAP1LC3B-205ENST00000564638 ADAMTS8Q9UP79 889 aa9.8□□□□□ -0.84
MAP1LC3B-205ENST00000564638 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
MAP1LC3B-205ENST00000564638 FBLN1P23142 703 aa9.79□□□□□ -0.84
MAP1LC3B-205ENST00000564638 TNNT2P45379 298 aaPredicted RBP9.79□□□□□ -0.84
MAP1LC3B-205ENST00000564638 CFAP53Q96M91 514 aa9.79□□□□□ -0.84
MAP1LC3B-205ENST00000564638 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
MAP1LC3B-205ENST00000564638 LMO7Q8WWI1 1683 aa9.79□□□□□ -0.84
MAP1LC3B-205ENST00000564638 RNF123Q5XPI4 1314 aa9.79□□□□□ -0.84
MAP1LC3B-205ENST00000564638 COL18A1P39060 1754 aa9.78□□□□□ -0.84
MAP1LC3B-205ENST00000564638 CAMTA1Q9Y6Y1 1673 aa9.78□□□□□ -0.84
MAP1LC3B-205ENST00000564638 RRS1Q15050 365 aaKnown RBP9.78□□□□□ -0.84
MAP1LC3B-205ENST00000564638 ARHGEF25Q86VW2 580 aa9.78□□□□□ -0.84
MAP1LC3B-205ENST00000564638 MAP2P11137 1827 aaKnown RBP9.77□□□□□ -0.84
MAP1LC3B-205ENST00000564638 AATKQ6ZMQ8 1374 aa9.77□□□□□ -0.84
MAP1LC3B-205ENST00000564638 A0A0G2JS52 829 aa9.77□□□□□ -0.85
MAP1LC3B-205ENST00000564638 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.85
MAP1LC3B-205ENST00000564638 AMPHP49418 695 aa9.77□□□□□ -0.85
MAP1LC3B-205ENST00000564638 MYT1Q01538 1121 aa9.77□□□□□ -0.85
MAP1LC3B-205ENST00000564638 VPS72Q15906 364 aa9.77□□□□□ -0.85
MAP1LC3B-205ENST00000564638 NGEFQ8N5V2 710 aa9.77□□□□□ -0.85
MAP1LC3B-205ENST00000564638 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
MAP1LC3B-205ENST00000564638 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
MAP1LC3B-205ENST00000564638 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
MAP1LC3B-205ENST00000564638 RCAN3Q9UKA8 241 aa9.76□□□□□ -0.85
MAP1LC3B-205ENST00000564638 AXIN2Q9Y2T1 843 aa9.76□□□□□ -0.85
MAP1LC3B-205ENST00000564638 COL5A2P05997 1499 aaPredicted RBP9.76□□□□□ -0.85
MAP1LC3B-205ENST00000564638 MAP3K19Q56UN5 1328 aa9.76□□□□□ -0.85
MAP1LC3B-205ENST00000564638 GOLGB1Q14789 3259 aaKnown RBP9.75□□□□□ -0.85
MAP1LC3B-205ENST00000564638 PPM1GO15355 546 aaPredicted RBP9.75□□□□□ -0.85
MAP1LC3B-205ENST00000564638 R3HDM1Q15032 1099 aaKnown RBP9.75□□□□□ -0.85
MAP1LC3B-205ENST00000564638 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
MAP1LC3B-205ENST00000564638 TOM1L2Q6ZVM7 507 aa9.75□□□□□ -0.85
MAP1LC3B-205ENST00000564638 RNF216Q9NWF9 866 aaPredicted RBP9.75□□□□□ -0.85
MAP1LC3B-205ENST00000564638 ABCC6O95255 1503 aa9.74□□□□□ -0.85
MAP1LC3B-205ENST00000564638 ONECUT3O60422 494 aaPredicted RBP9.74□□□□□ -0.85
MAP1LC3B-205ENST00000564638 RRP1P56182 461 aaKnown RBP9.74□□□□□ -0.85
MAP1LC3B-205ENST00000564638 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
MAP1LC3B-205ENST00000564638 IP6K1Q92551 441 aa9.74□□□□□ -0.85
MAP1LC3B-205ENST00000564638 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
MAP1LC3B-205ENST00000564638 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
MAP1LC3B-205ENST00000564638 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms