RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-231ENST00000564288 RALGAPBQ86X10 1494 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 MYO6Q9UM54 1294 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 RUNDC1Q96C34 613 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 HSP90AB4PQ58FF6 505 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 C14orf37Q86TY3 774 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 GPRASP1Q5JY77 1395 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 MAP9Q49MG5 647 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 YY1AP1Q9H869 796 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 GTF2F1P35269 517 aaKnown RBP eCLIP5.03□□□□□ -1.6
MACF1-231ENST00000564288 UBE2HP62256 183 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 SPATS2Q86XZ4 545 aaKnown RBP5.03□□□□□ -1.6
MACF1-231ENST00000564288 FOXD4L1Q9NU39 408 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 NPHP1O15259 732 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 SF3B2Q13435 895 aaKnown RBP5.03□□□□□ -1.6
MACF1-231ENST00000564288 TICAM2Q86XR7 235 aa5.03□□□□□ -1.6
MACF1-231ENST00000564288 GOLGA6L10A0A0M3HER8 536 aa5.03□□□□□ -1.61
MACF1-231ENST00000564288 H3BQV1 296 aa5.03□□□□□ -1.61
MACF1-231ENST00000564288 U2AF1L5P0DN76 240 aaPredicted RBP5.03□□□□□ -1.61
MACF1-231ENST00000564288 U2AF1Q01081 240 aaKnown RBP eCLIP5.03□□□□□ -1.618e-7■□□□□ 9.5
MACF1-231ENST00000564288 IFFO2Q5TF58 517 aa5.03□□□□□ -1.61
MACF1-231ENST00000564288 A0A1B0GUA9 196 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 RAB3GAP1Q15042 981 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 ZNF853P0CG23 659 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 NF2P35240 595 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 ERO1AQ96HE7 468 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 TERF2Q15554 542 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 ZSCAN23Q3MJ62 389 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 CHD1LQ86WJ1 897 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 CASQ1P31415 396 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 SLC20A2Q08357 652 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 INTS4Q96HW7 963 aaKnown RBP5.02□□□□□ -1.61
MACF1-231ENST00000564288 PRIM1P49642 420 aaKnown RBP5.02□□□□□ -1.61
MACF1-231ENST00000564288 RTF1Q92541 710 aaKnown RBP5.02□□□□□ -1.61
MACF1-231ENST00000564288 SRCIN1Q9C0H9 1055 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 EZRP15311 586 aaKnown RBP5.02□□□□□ -1.61
MACF1-231ENST00000564288 IQCEQ6IPM2 695 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 PPFIA3O75145 1194 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 SH3BGRP55822 239 aaPredicted RBP5.02□□□□□ -1.61
MACF1-231ENST00000564288 OTUD6BQ8N6M0 293 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 JRKLQ9Y4A0 524 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 GOLIM4O00461 696 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 ZNF777Q9ULD5 760 aaPredicted RBP5.02□□□□□ -1.61
MACF1-231ENST00000564288 NCOA1Q15788 1441 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 TERF2IPQ9NYB0 399 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 DNMBPQ6XZF7 1577 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 EIF5P55010 431 aaKnown RBP5.02□□□□□ -1.61
MACF1-231ENST00000564288 PIP4K2BP78356 416 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 PRDM4Q9UKN5 801 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 HDXQ7Z353 690 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 ANO10Q9NW15 660 aa5.02□□□□□ -1.61
MACF1-231ENST00000564288 OLFM4Q6UX06 510 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 SYNE3Q6ZMZ3 975 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 RPAP2Q8IXW5 612 aaPredicted RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 DHX16O60231 1041 aaKnown RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 CTCFLQ8NI51 663 aaPredicted RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 LAMC3Q9Y6N6 1575 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 SLU7O95391 586 aaKnown RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 CCDC9Q9Y3X0 531 aaKnown RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 TCP11Q8WWU5 503 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 LRRCC1Q9C099 1032 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 IGF1RP08069 1367 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 WDR7Q9Y4E6 1490 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 CCDC171Q6TFL3 1326 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 ERC2O15083 957 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 ZSCAN20P17040 1043 aaPredicted RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 FILIP1LQ4L180 1135 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 TMED8Q6PL24 325 aaPredicted RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 ANKRD50Q9ULJ7 1429 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 ATL3Q6DD88 541 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 A0A087WUV0 522 aaPredicted RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 KIF3CO14782 793 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 BMP2KLQ5H9B9 411 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 TRIM6-TRIM34B2RNG4 842 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 CLEC17AQ6ZS10 378 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 TRIM34Q9BYJ4 488 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 CPLX2Q6PUV4 134 aaKnown RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 CCDC73Q6ZRK6 1079 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 KINO60870 393 aaKnown RBP5.01□□□□□ -1.61
MACF1-231ENST00000564288 RIPK4P57078 832 aa5.01□□□□□ -1.61
MACF1-231ENST00000564288 SKILP12757 684 aa5□□□□□ -1.61
MACF1-231ENST00000564288 PIP4K2AP48426 406 aaPredicted RBP5□□□□□ -1.61
MACF1-231ENST00000564288 PKD2Q13563 968 aa5□□□□□ -1.61
MACF1-231ENST00000564288 IBTKQ9P2D0 1353 aaPredicted RBP5□□□□□ -1.61
MACF1-231ENST00000564288 WIZO95785 1651 aa5□□□□□ -1.61
MACF1-231ENST00000564288 KIAA1107Q9UPP5 1409 aa5□□□□□ -1.61
MACF1-231ENST00000564288 ABCF1Q8NE71 845 aaKnown RBP eCLIP5□□□□□ -1.61
MACF1-231ENST00000564288 SHTN1A0MZ66 631 aa5□□□□□ -1.61
MACF1-231ENST00000564288 MAGEA9P43362 315 aa5□□□□□ -1.61
MACF1-231ENST00000564288 ZKSCAN8Q15776 578 aaPredicted RBP5□□□□□ -1.61
MACF1-231ENST00000564288 ERICH4A6NGS2 130 aa5□□□□□ -1.61
MACF1-231ENST00000564288 LARP1BQ659C4 914 aaKnown RBP5□□□□□ -1.61
MACF1-231ENST00000564288 GOLGA5Q8TBA6 731 aa5□□□□□ -1.61
MACF1-231ENST00000564288 CCDC184Q52MB2 194 aa5□□□□□ -1.61
MACF1-231ENST00000564288 GRIN2BQ13224 1484 aa5□□□□□ -1.61
MACF1-231ENST00000564288 PANK2Q9BZ23 570 aa5□□□□□ -1.61
MACF1-231ENST00000564288 RSPH14Q9UHP6 348 aa5□□□□□ -1.61
MACF1-231ENST00000564288 ZNHIT6Q9NWK9 470 aaKnown RBP5□□□□□ -1.61
MACF1-231ENST00000564288 URI1O94763 535 aaPredicted RBP5□□□□□ -1.61
MACF1-231ENST00000564288 EIF4G1Q04637 1599 aaKnown RBP5□□□□□ -1.61
MACF1-231ENST00000564288 HMGB3O15347 200 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms