RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 COL18A1P39060 1754 aa13.68□□□□□ -0.22
AC055876.4-201ENST00000562515 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
AC055876.4-201ENST00000562515 CPSF1Q10570 1443 aaKnown RBP13.68□□□□□ -0.22
AC055876.4-201ENST00000562515 SOX12O15370 315 aa13.68□□□□□ -0.22
AC055876.4-201ENST00000562515 DDB1Q16531 1140 aa13.68□□□□□ -0.22
AC055876.4-201ENST00000562515 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
AC055876.4-201ENST00000562515 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
AC055876.4-201ENST00000562515 LTN1O94822 1766 aa13.66□□□□□ -0.22
AC055876.4-201ENST00000562515 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
AC055876.4-201ENST00000562515 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
AC055876.4-201ENST00000562515 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
AC055876.4-201ENST00000562515 L3MBTL2Q969R5 705 aa13.64□□□□□ -0.23
AC055876.4-201ENST00000562515 NEUROD1Q13562 356 aa13.63□□□□□ -0.23
AC055876.4-201ENST00000562515 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
AC055876.4-201ENST00000562515 SPON1Q9HCB6 807 aa13.63□□□□□ -0.23
AC055876.4-201ENST00000562515 ABCC6O95255 1503 aa13.63□□□□□ -0.23
AC055876.4-201ENST00000562515 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
AC055876.4-201ENST00000562515 KTN1Q86UP2 1357 aaKnown RBP13.62□□□□□ -0.23
AC055876.4-201ENST00000562515 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
AC055876.4-201ENST00000562515 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
AC055876.4-201ENST00000562515 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
AC055876.4-201ENST00000562515 NFAT5O94916 1531 aa13.61□□□□□ -0.23
AC055876.4-201ENST00000562515 NHSQ6T4R5 1651 aa13.61□□□□□ -0.23
AC055876.4-201ENST00000562515 USP54Q70EL1 1684 aa13.61□□□□□ -0.23
AC055876.4-201ENST00000562515 KCNQ2O43526 872 aa13.6□□□□□ -0.23
AC055876.4-201ENST00000562515 TNS2Q63HR2 1409 aa13.6□□□□□ -0.23
AC055876.4-201ENST00000562515 SIN3AQ96ST3 1273 aa13.6□□□□□ -0.23
AC055876.4-201ENST00000562515 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
AC055876.4-201ENST00000562515 MYOM1P52179 1685 aa13.59□□□□□ -0.23
AC055876.4-201ENST00000562515 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
AC055876.4-201ENST00000562515 NINLQ9Y2I6 1382 aa13.59□□□□□ -0.23
AC055876.4-201ENST00000562515 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
AC055876.4-201ENST00000562515 PLSCR1O15162 318 aa13.58□□□□□ -0.24
AC055876.4-201ENST00000562515 YY1P25490 414 aa13.58□□□□□ -0.24
AC055876.4-201ENST00000562515 ARHGEF25Q86VW2 580 aa13.58□□□□□ -0.24
AC055876.4-201ENST00000562515 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
AC055876.4-201ENST00000562515 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
AC055876.4-201ENST00000562515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
AC055876.4-201ENST00000562515 CARD10Q9BWT7 1032 aa13.57□□□□□ -0.24
AC055876.4-201ENST00000562515 BTAF1O14981 1849 aa13.56□□□□□ -0.24
AC055876.4-201ENST00000562515 EXOC5O00471 708 aa13.56□□□□□ -0.24
AC055876.4-201ENST00000562515 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
AC055876.4-201ENST00000562515 TMC1Q8TDI8 760 aa13.56□□□□□ -0.24
AC055876.4-201ENST00000562515 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
AC055876.4-201ENST00000562515 STK32BQ9NY57 414 aa13.56□□□□□ -0.24
AC055876.4-201ENST00000562515 BCL9O00512 1426 aa13.56□□□□□ -0.24
AC055876.4-201ENST00000562515 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
AC055876.4-201ENST00000562515 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
AC055876.4-201ENST00000562515 SBNO2Q9Y2G9 1366 aa13.55□□□□□ -0.24
AC055876.4-201ENST00000562515 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
AC055876.4-201ENST00000562515 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
AC055876.4-201ENST00000562515 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
AC055876.4-201ENST00000562515 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
AC055876.4-201ENST00000562515 PTF1AQ7RTS3 328 aa13.53□□□□□ -0.24
AC055876.4-201ENST00000562515 NME9Q86XW9 330 aa13.52□□□□□ -0.25
AC055876.4-201ENST00000562515 ACSBG1Q96GR2 724 aa13.52□□□□□ -0.25
AC055876.4-201ENST00000562515 ERBB3P21860 1342 aa13.52□□□□□ -0.25
AC055876.4-201ENST00000562515 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.25
AC055876.4-201ENST00000562515 DOT1LQ8TEK3 1739 aa13.51□□□□□ -0.25
AC055876.4-201ENST00000562515 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
AC055876.4-201ENST00000562515 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
AC055876.4-201ENST00000562515 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
AC055876.4-201ENST00000562515 IL2RBP14784 551 aa13.5□□□□□ -0.25
AC055876.4-201ENST00000562515 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
AC055876.4-201ENST00000562515 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
AC055876.4-201ENST00000562515 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
AC055876.4-201ENST00000562515 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
AC055876.4-201ENST00000562515 SLC15A2Q16348 729 aa13.49□□□□□ -0.25
AC055876.4-201ENST00000562515 CHD4Q14839 1912 aa13.49□□□□□ -0.25
AC055876.4-201ENST00000562515 PDGFDQ9GZP0 370 aaPredicted RBP13.48□□□□□ -0.25
AC055876.4-201ENST00000562515 RGPD2P0DJD1 1756 aa13.48□□□□□ -0.25
AC055876.4-201ENST00000562515 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
AC055876.4-201ENST00000562515 PROM2Q8N271 834 aa13.47□□□□□ -0.25
AC055876.4-201ENST00000562515 LTV1Q96GA3 475 aaPredicted RBP13.47□□□□□ -0.25
AC055876.4-201ENST00000562515 MTFR1LQ9H019 292 aa13.47□□□□□ -0.25
AC055876.4-201ENST00000562515 KIF20BQ96Q89 1820 aa13.46□□□□□ -0.25
AC055876.4-201ENST00000562515 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
AC055876.4-201ENST00000562515 TUBGCP6Q96RT7 1819 aa13.46□□□□□ -0.26
AC055876.4-201ENST00000562515 FHDC1Q9C0D6 1143 aaPredicted RBP13.45□□□□□ -0.26
AC055876.4-201ENST00000562515 SHANK3Q9BYB0 1731 aa13.44□□□□□ -0.26
AC055876.4-201ENST00000562515 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
AC055876.4-201ENST00000562515 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
AC055876.4-201ENST00000562515 COG3Q96JB2 828 aa13.44□□□□□ -0.26
AC055876.4-201ENST00000562515 PTGER2P43116 358 aa13.43□□□□□ -0.26
AC055876.4-201ENST00000562515 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
AC055876.4-201ENST00000562515 LY75O60449 1722 aa13.42□□□□□ -0.26
AC055876.4-201ENST00000562515 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
AC055876.4-201ENST00000562515 AMPHP49418 695 aa13.42□□□□□ -0.26
AC055876.4-201ENST00000562515 IP6K1Q92551 441 aa13.41□□□□□ -0.26
AC055876.4-201ENST00000562515 ARXQ96QS3 562 aa13.41□□□□□ -0.26
AC055876.4-201ENST00000562515 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
AC055876.4-201ENST00000562515 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
AC055876.4-201ENST00000562515 POLD1P28340 1107 aa13.39□□□□□ -0.27
AC055876.4-201ENST00000562515 HOXC9P31274 260 aa13.39□□□□□ -0.27
AC055876.4-201ENST00000562515 PUS7Q96PZ0 661 aaKnown RBP13.39□□□□□ -0.27
AC055876.4-201ENST00000562515 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
AC055876.4-201ENST00000562515 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
AC055876.4-201ENST00000562515 C5P01031 1676 aa13.38□□□□□ -0.27
AC055876.4-201ENST00000562515 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
AC055876.4-201ENST00000562515 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms