RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 CRB1P82279 1406 aa15.88■□□□□ 0.13
GABPB1-210ENST00000560825 RREB1Q92766 1687 aa15.88■□□□□ 0.13
GABPB1-210ENST00000560825 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
GABPB1-210ENST00000560825 RGPD2P0DJD1 1756 aa15.88■□□□□ 0.13
GABPB1-210ENST00000560825 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
GABPB1-210ENST00000560825 EN1Q05925 392 aaPredicted RBP15.87■□□□□ 0.13
GABPB1-210ENST00000560825 BARGINQ6ZT62 677 aa15.87■□□□□ 0.13
GABPB1-210ENST00000560825 ARHGEF25Q86VW2 580 aa15.87■□□□□ 0.13
GABPB1-210ENST00000560825 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
GABPB1-210ENST00000560825 NUP188Q5SRE5 1749 aa15.87■□□□□ 0.13
GABPB1-210ENST00000560825 TCP11L2Q8N4U5 519 aa15.86■□□□□ 0.13
GABPB1-210ENST00000560825 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
GABPB1-210ENST00000560825 TRIM37O94972 964 aa15.85■□□□□ 0.13
GABPB1-210ENST00000560825 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
GABPB1-210ENST00000560825 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
GABPB1-210ENST00000560825 FBLN1P23142 703 aa15.85■□□□□ 0.13
GABPB1-210ENST00000560825 PCGF6Q9BYE7 350 aa15.85■□□□□ 0.13
GABPB1-210ENST00000560825 USP47Q96K76 1375 aa15.84■□□□□ 0.13
GABPB1-210ENST00000560825 PSDA5PKW4 1024 aaPredicted RBP15.84■□□□□ 0.13
GABPB1-210ENST00000560825 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
GABPB1-210ENST00000560825 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
GABPB1-210ENST00000560825 OVOS2A0A0J9YW53 1432 aa15.84■□□□□ 0.13
GABPB1-210ENST00000560825 OVOS2Q6IE36 1432 aa15.84■□□□□ 0.13
GABPB1-210ENST00000560825 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.12
GABPB1-210ENST00000560825 WDR17Q8IZU2 1322 aa15.82■□□□□ 0.12
GABPB1-210ENST00000560825 DISP2A7MBM2 1401 aa15.82■□□□□ 0.12
GABPB1-210ENST00000560825 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
GABPB1-210ENST00000560825 KIF20BQ96Q89 1820 aa15.81■□□□□ 0.12
GABPB1-210ENST00000560825 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
GABPB1-210ENST00000560825 TOM1L2Q6ZVM7 507 aa15.81■□□□□ 0.12
GABPB1-210ENST00000560825 CAMKK2Q96RR4 588 aa15.8■□□□□ 0.12
GABPB1-210ENST00000560825 ABCC6O95255 1503 aa15.8■□□□□ 0.12
GABPB1-210ENST00000560825 BAG6P46379 1132 aa15.79■□□□□ 0.12
GABPB1-210ENST00000560825 PDE3BQ13370 1112 aa15.79■□□□□ 0.12
GABPB1-210ENST00000560825 FAM196AQ6ZSG2 479 aa15.79■□□□□ 0.12
GABPB1-210ENST00000560825 KCNH5Q8NCM2 988 aa15.79■□□□□ 0.12
GABPB1-210ENST00000560825 THRAP3Q9Y2W1 955 aaKnown RBP15.79■□□□□ 0.12
GABPB1-210ENST00000560825 MARCH10Q8NA82 808 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-210ENST00000560825 FAM208AQ9UK61 1670 aaKnown RBP15.78■□□□□ 0.12
GABPB1-210ENST00000560825 SHANK3Q9BYB0 1731 aa15.78■□□□□ 0.12
GABPB1-210ENST00000560825 LRP5O75197 1615 aa15.77■□□□□ 0.12
GABPB1-210ENST00000560825 HDGFL2Q7Z4V5 671 aaPredicted RBP15.77■□□□□ 0.12
GABPB1-210ENST00000560825 APBA3O96018 575 aa15.77■□□□□ 0.11
GABPB1-210ENST00000560825 PUS7Q96PZ0 661 aaKnown RBP15.76■□□□□ 0.11
GABPB1-210ENST00000560825 ERBB3P21860 1342 aa15.76■□□□□ 0.11
GABPB1-210ENST00000560825 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
GABPB1-210ENST00000560825 R3HDM1Q15032 1099 aaKnown RBP15.75■□□□□ 0.11
GABPB1-210ENST00000560825 CARD10Q9BWT7 1032 aa15.75■□□□□ 0.11
GABPB1-210ENST00000560825 TERF2IPQ9NYB0 399 aa15.75■□□□□ 0.11
GABPB1-210ENST00000560825 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
GABPB1-210ENST00000560825 RGPD3A6NKT7 1758 aaPredicted RBP15.75■□□□□ 0.11
GABPB1-210ENST00000560825 RGPD4Q7Z3J3 1758 aa15.75■□□□□ 0.11
GABPB1-210ENST00000560825 ANKRD36BQ8N2N9 1353 aa15.74■□□□□ 0.11
GABPB1-210ENST00000560825 DDB1Q16531 1140 aa15.74■□□□□ 0.11
GABPB1-210ENST00000560825 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
GABPB1-210ENST00000560825 NHSQ6T4R5 1651 aa15.73■□□□□ 0.11
GABPB1-210ENST00000560825 ANKRD24Q8TF21 1146 aa15.72■□□□□ 0.11
GABPB1-210ENST00000560825 CARD14Q9BXL6 1004 aa15.72■□□□□ 0.11
GABPB1-210ENST00000560825 GGNBP2Q9H3C7 697 aa15.72■□□□□ 0.11
GABPB1-210ENST00000560825 TNS2Q63HR2 1409 aa15.71■□□□□ 0.11
GABPB1-210ENST00000560825 BTAF1O14981 1849 aa15.71■□□□□ 0.11
GABPB1-210ENST00000560825 MAP3K19Q56UN5 1328 aa15.71■□□□□ 0.11
GABPB1-210ENST00000560825 FYB1O15117 783 aa15.71■□□□□ 0.11
GABPB1-210ENST00000560825 NINLQ9Y2I6 1382 aa15.71■□□□□ 0.1
GABPB1-210ENST00000560825 KCNQ2O43526 872 aa15.7■□□□□ 0.1
GABPB1-210ENST00000560825 LTV1Q96GA3 475 aaPredicted RBP15.7■□□□□ 0.1
GABPB1-210ENST00000560825 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
GABPB1-210ENST00000560825 TMF1P82094 1093 aa15.69■□□□□ 0.1
GABPB1-210ENST00000560825 RRS1Q15050 365 aaKnown RBP15.69■□□□□ 0.1
GABPB1-210ENST00000560825 PROM2Q8N271 834 aa15.69■□□□□ 0.1
GABPB1-210ENST00000560825 CCDC7Q96M83 1385 aa15.69■□□□□ 0.1
GABPB1-210ENST00000560825 CASZ1Q86V15 1759 aa15.69■□□□□ 0.1
GABPB1-210ENST00000560825 MAP2P11137 1827 aaKnown RBP15.68■□□□□ 0.1
GABPB1-210ENST00000560825 DOT1LQ8TEK3 1739 aa15.68■□□□□ 0.1
GABPB1-210ENST00000560825 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
GABPB1-210ENST00000560825 HOXC9P31274 260 aa15.68■□□□□ 0.1
GABPB1-210ENST00000560825 IP6K1Q92551 441 aa15.68■□□□□ 0.1
GABPB1-210ENST00000560825 COG3Q96JB2 828 aa15.67■□□□□ 0.1
GABPB1-210ENST00000560825 PDGFDQ9GZP0 370 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-210ENST00000560825 ANO8Q9HCE9 1232 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-210ENST00000560825 MEGF6O75095 1541 aa15.66■□□□□ 0.1
GABPB1-210ENST00000560825 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
GABPB1-210ENST00000560825 BCL9O00512 1426 aa15.66■□□□□ 0.1
GABPB1-210ENST00000560825 NSD3Q9BZ95 1437 aa15.66■□□□□ 0.1
GABPB1-210ENST00000560825 C1QBPQ07021 282 aaKnown RBP15.66■□□□□ 0.1
GABPB1-210ENST00000560825 ACSBG1Q96GR2 724 aa15.66■□□□□ 0.1
GABPB1-210ENST00000560825 KAT6BQ8WYB5 2073 aa15.65■□□□□ 0.1
GABPB1-210ENST00000560825 EXOC5O00471 708 aa15.65■□□□□ 0.1
GABPB1-210ENST00000560825 CCER1Q8TC90 406 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-210ENST00000560825 BCL11BQ9C0K0 894 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-210ENST00000560825 PARD3Q8TEW0 1356 aa15.65■□□□□ 0.1
GABPB1-210ENST00000560825 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-210ENST00000560825 IL2RBP14784 551 aa15.64■□□□□ 0.09
GABPB1-210ENST00000560825 USHBP1Q8N6Y0 703 aa15.64■□□□□ 0.09
GABPB1-210ENST00000560825 TIMELESSQ9UNS1 1208 aa15.64■□□□□ 0.09
GABPB1-210ENST00000560825 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
GABPB1-210ENST00000560825 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
GABPB1-210ENST00000560825 CDCA7Q9BWT1 371 aaPredicted RBP15.63■□□□□ 0.09
GABPB1-210ENST00000560825 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
GABPB1-210ENST00000560825 TUBGCP6Q96RT7 1819 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms