RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
AC087878.1-201ENST00000560709 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
AC087878.1-201ENST00000560709 SOS2Q07890 1332 aaPredicted RBP15.54■□□□□ 0.08
AC087878.1-201ENST00000560709 SPATA31A3Q5VYP0 1347 aa15.54■□□□□ 0.08
AC087878.1-201ENST00000560709 GCP02774 474 aa15.54■□□□□ 0.08
AC087878.1-201ENST00000560709 HOXC9P31274 260 aa15.54■□□□□ 0.08
AC087878.1-201ENST00000560709 E9PSI1 815 aa15.53■□□□□ 0.08
AC087878.1-201ENST00000560709 NUTM2GQ5VZR2 741 aa15.53■□□□□ 0.08
AC087878.1-201ENST00000560709 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
AC087878.1-201ENST00000560709 IP6K1Q92551 441 aa15.53■□□□□ 0.08
AC087878.1-201ENST00000560709 SOX12O15370 315 aa15.52■□□□□ 0.08
AC087878.1-201ENST00000560709 XPCQ01831 940 aaPredicted RBP15.52■□□□□ 0.08
AC087878.1-201ENST00000560709 LMOD3Q0VAK6 560 aa15.52■□□□□ 0.08
AC087878.1-201ENST00000560709 HSP90AB2PQ58FF8 381 aa15.52■□□□□ 0.08
AC087878.1-201ENST00000560709 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
AC087878.1-201ENST00000560709 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
AC087878.1-201ENST00000560709 IGSF1Q8N6C5 1336 aa15.51■□□□□ 0.07
AC087878.1-201ENST00000560709 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
AC087878.1-201ENST00000560709 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
AC087878.1-201ENST00000560709 ARHGEF25Q86VW2 580 aa15.51■□□□□ 0.07
AC087878.1-201ENST00000560709 WWC1Q8IX03 1113 aa15.51■□□□□ 0.07
AC087878.1-201ENST00000560709 KDRP35968 1356 aa15.5■□□□□ 0.07
AC087878.1-201ENST00000560709 NHSL1Q5SYE7 1610 aa15.5■□□□□ 0.07
AC087878.1-201ENST00000560709 TMPOP42166 694 aaKnown RBP15.5■□□□□ 0.07
AC087878.1-201ENST00000560709 CALD1Q05682 793 aaKnown RBP15.5■□□□□ 0.07
AC087878.1-201ENST00000560709 IL16Q14005 1332 aa15.49■□□□□ 0.07
AC087878.1-201ENST00000560709 SLFN5Q08AF3 891 aa15.49■□□□□ 0.07
AC087878.1-201ENST00000560709 ERICH6BQ5W0A0 696 aa15.49■□□□□ 0.07
AC087878.1-201ENST00000560709 CPDO75976 1380 aa15.49■□□□□ 0.07
AC087878.1-201ENST00000560709 NFE2L2Q16236 605 aa15.48■□□□□ 0.07
AC087878.1-201ENST00000560709 LTN1O94822 1766 aa15.48■□□□□ 0.07
AC087878.1-201ENST00000560709 AHDC1Q5TGY3 1603 aaPredicted RBP15.47■□□□□ 0.07
AC087878.1-201ENST00000560709 HMOX1P09601 288 aa15.47■□□□□ 0.07
AC087878.1-201ENST00000560709 SULT6B1Q6IMI4 303 aa15.47■□□□□ 0.07
AC087878.1-201ENST00000560709 TRMT2AQ8IZ69 625 aaKnown RBP15.47■□□□□ 0.07
AC087878.1-201ENST00000560709 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
AC087878.1-201ENST00000560709 RIPK4P57078 832 aa15.46■□□□□ 0.07
AC087878.1-201ENST00000560709 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
AC087878.1-201ENST00000560709 PLEKHG2Q9H7P9 1386 aa15.46■□□□□ 0.07
AC087878.1-201ENST00000560709 TOM1O60784 492 aa15.45■□□□□ 0.06
AC087878.1-201ENST00000560709 EYA1Q99502 592 aa15.45■□□□□ 0.06
AC087878.1-201ENST00000560709 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
AC087878.1-201ENST00000560709 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
AC087878.1-201ENST00000560709 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
AC087878.1-201ENST00000560709 DDX17Q92841 729 aaKnown RBP15.44■□□□□ 0.06
AC087878.1-201ENST00000560709 CDCA7LQ96GN5 454 aa15.44■□□□□ 0.06
AC087878.1-201ENST00000560709 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
AC087878.1-201ENST00000560709 RRP7AQ9Y3A4 280 aaKnown RBP15.44■□□□□ 0.06
AC087878.1-201ENST00000560709 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
AC087878.1-201ENST00000560709 NCAPD2Q15021 1401 aa15.43■□□□□ 0.06
AC087878.1-201ENST00000560709 CRYBG1Q9Y4K1 1723 aa15.43■□□□□ 0.06
AC087878.1-201ENST00000560709 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
AC087878.1-201ENST00000560709 LRRC59Q96AG4 307 aaKnown RBP15.43■□□□□ 0.06
AC087878.1-201ENST00000560709 CT47B1P0C2W7 299 aaPredicted RBP15.42■□□□□ 0.06
AC087878.1-201ENST00000560709 TRIM35Q9UPQ4 493 aa15.42■□□□□ 0.06
AC087878.1-201ENST00000560709 ROBO1Q9Y6N7 1651 aa15.41■□□□□ 0.06
AC087878.1-201ENST00000560709 FKBP8Q14318 412 aa15.41■□□□□ 0.06
AC087878.1-201ENST00000560709 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
AC087878.1-201ENST00000560709 PHACTR3Q96KR7 559 aa15.41■□□□□ 0.06
AC087878.1-201ENST00000560709 CAMTA1Q9Y6Y1 1673 aa15.41■□□□□ 0.06
AC087878.1-201ENST00000560709 HTATSF1O43719 755 aaKnown RBP15.4■□□□□ 0.06
AC087878.1-201ENST00000560709 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
AC087878.1-201ENST00000560709 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
AC087878.1-201ENST00000560709 FAM208AQ9UK61 1670 aaKnown RBP15.4■□□□□ 0.06
AC087878.1-201ENST00000560709 ERBB3P21860 1342 aa15.4■□□□□ 0.06
AC087878.1-201ENST00000560709 HAP1P54257 671 aaPredicted RBP15.39■□□□□ 0.05
AC087878.1-201ENST00000560709 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
AC087878.1-201ENST00000560709 ZC3H6P61129 1189 aaKnown RBP15.38■□□□□ 0.05
AC087878.1-201ENST00000560709 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
AC087878.1-201ENST00000560709 IFT57Q9NWB7 429 aa15.38■□□□□ 0.05
AC087878.1-201ENST00000560709 KIAA0232Q92628 1395 aa15.37■□□□□ 0.05
AC087878.1-201ENST00000560709 COL22A1Q8NFW1 1626 aaPredicted RBP15.37■□□□□ 0.05
AC087878.1-201ENST00000560709 AMOTQ4VCS5 1084 aa15.37■□□□□ 0.05
AC087878.1-201ENST00000560709 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
AC087878.1-201ENST00000560709 LMO7Q8WWI1 1683 aa15.36■□□□□ 0.05
AC087878.1-201ENST00000560709 GNAI1P63096 354 aa15.36■□□□□ 0.05
AC087878.1-201ENST00000560709 RTF1Q92541 710 aaKnown RBP15.36■□□□□ 0.05
AC087878.1-201ENST00000560709 PRDM11Q9NQV5 511 aa15.36■□□□□ 0.05
AC087878.1-201ENST00000560709 COL18A1P39060 1754 aa15.36■□□□□ 0.05
AC087878.1-201ENST00000560709 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
AC087878.1-201ENST00000560709 RRP1P56182 461 aaKnown RBP15.35■□□□□ 0.05
AC087878.1-201ENST00000560709 NBPF6Q5VWK0 638 aa15.35■□□□□ 0.05
AC087878.1-201ENST00000560709 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
AC087878.1-201ENST00000560709 NBPF4Q96M43 638 aa15.35■□□□□ 0.05
AC087878.1-201ENST00000560709 SPINK5Q9NQ38 1064 aaPredicted RBP15.35■□□□□ 0.05
AC087878.1-201ENST00000560709 PLEKHO1Q53GL0 409 aaPredicted RBP15.34■□□□□ 0.05
AC087878.1-201ENST00000560709 CABLES1Q8TDN4 633 aa15.34■□□□□ 0.05
AC087878.1-201ENST00000560709 AXIN2Q9Y2T1 843 aa15.34■□□□□ 0.05
AC087878.1-201ENST00000560709 FANCIQ9NVI1 1328 aa15.34■□□□□ 0.05
AC087878.1-201ENST00000560709 MTHFSDQ2M296 383 aaKnown RBP15.33■□□□□ 0.04
AC087878.1-201ENST00000560709 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
AC087878.1-201ENST00000560709 MAP3K5Q99683 1374 aa15.33■□□□□ 0.04
AC087878.1-201ENST00000560709 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
AC087878.1-201ENST00000560709 ZNF853P0CG23 659 aa15.32■□□□□ 0.04
AC087878.1-201ENST00000560709 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
AC087878.1-201ENST00000560709 BABAM1Q9NWV8 329 aa15.32■□□□□ 0.04
AC087878.1-201ENST00000560709 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
AC087878.1-201ENST00000560709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
AC087878.1-201ENST00000560709 WDR17Q8IZU2 1322 aa15.31■□□□□ 0.04
AC087878.1-201ENST00000560709 OVOS2A0A0G2JMS6 1433 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms