RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 RGPD4Q7Z3J3 1758 aa17.31■□□□□ 0.36
MARK3-221ENST00000560603 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
MARK3-221ENST00000560603 CSB-PGBD3P0DP91 1061 aa17.3■□□□□ 0.36
MARK3-221ENST00000560603 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
MARK3-221ENST00000560603 CARD10Q9BWT7 1032 aa17.29■□□□□ 0.36
MARK3-221ENST00000560603 BCL9O00512 1426 aa17.29■□□□□ 0.36
MARK3-221ENST00000560603 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
MARK3-221ENST00000560603 TTC21BQ7Z4L5 1316 aa17.28■□□□□ 0.36
MARK3-221ENST00000560603 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
MARK3-221ENST00000560603 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
MARK3-221ENST00000560603 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
MARK3-221ENST00000560603 AXIN2Q9Y2T1 843 aa17.28■□□□□ 0.36
MARK3-221ENST00000560603 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
MARK3-221ENST00000560603 EXOC5O00471 708 aa17.27■□□□□ 0.36
MARK3-221ENST00000560603 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
MARK3-221ENST00000560603 TRPM1Q7Z4N2 1603 aa17.26■□□□□ 0.35
MARK3-221ENST00000560603 COL18A1P39060 1754 aa17.26■□□□□ 0.35
MARK3-221ENST00000560603 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
MARK3-221ENST00000560603 ANO8Q9HCE9 1232 aaPredicted RBP17.26■□□□□ 0.35
MARK3-221ENST00000560603 SOX12O15370 315 aa17.25■□□□□ 0.35
MARK3-221ENST00000560603 STK32BQ9NY57 414 aa17.25■□□□□ 0.35
MARK3-221ENST00000560603 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
MARK3-221ENST00000560603 AKAP12Q02952 1782 aa17.24■□□□□ 0.35
MARK3-221ENST00000560603 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
MARK3-221ENST00000560603 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
MARK3-221ENST00000560603 WNK3Q9BYP7 1800 aa17.23■□□□□ 0.35
MARK3-221ENST00000560603 ZBTB7AO95365 584 aa17.22■□□□□ 0.35
MARK3-221ENST00000560603 TXNRD1Q16881 649 aa17.22■□□□□ 0.35
MARK3-221ENST00000560603 PROM2Q8N271 834 aa17.22■□□□□ 0.35
MARK3-221ENST00000560603 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
MARK3-221ENST00000560603 ABCC6O95255 1503 aa17.21■□□□□ 0.34
MARK3-221ENST00000560603 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
MARK3-221ENST00000560603 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
MARK3-221ENST00000560603 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
MARK3-221ENST00000560603 TNS2Q63HR2 1409 aa17.19■□□□□ 0.34
MARK3-221ENST00000560603 RGPD5Q99666 1765 aa17.18■□□□□ 0.34
MARK3-221ENST00000560603 NFAT5O94916 1531 aa17.18■□□□□ 0.34
MARK3-221ENST00000560603 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
MARK3-221ENST00000560603 PTGER2P43116 358 aa17.17■□□□□ 0.34
MARK3-221ENST00000560603 MTFR1LQ9H019 292 aa17.17■□□□□ 0.34
MARK3-221ENST00000560603 NLRP2Q9NX02 1062 aa17.17■□□□□ 0.34
MARK3-221ENST00000560603 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
MARK3-221ENST00000560603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.346e-6■□□□□ 8.8
MARK3-221ENST00000560603 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
MARK3-221ENST00000560603 IL2RBP14784 551 aa17.15■□□□□ 0.34
MARK3-221ENST00000560603 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
MARK3-221ENST00000560603 ERBB3P21860 1342 aa17.15■□□□□ 0.34
MARK3-221ENST00000560603 HDGFL2Q7Z4V5 671 aaPredicted RBP17.14■□□□□ 0.33
MARK3-221ENST00000560603 SBNO2Q9Y2G9 1366 aa17.14■□□□□ 0.33
MARK3-221ENST00000560603 TMC1Q8TDI8 760 aa17.13■□□□□ 0.33
MARK3-221ENST00000560603 ACSBG1Q96GR2 724 aa17.13■□□□□ 0.33
MARK3-221ENST00000560603 SYT17Q9BSW7 474 aa17.13■□□□□ 0.33
MARK3-221ENST00000560603 FHDC1Q9C0D6 1143 aaPredicted RBP17.13■□□□□ 0.33
MARK3-221ENST00000560603 MYOM1P52179 1685 aa17.13■□□□□ 0.33
MARK3-221ENST00000560603 UTRNP46939 3433 aa17.12■□□□□ 0.33
MARK3-221ENST00000560603 NHSQ6T4R5 1651 aa17.12■□□□□ 0.33
MARK3-221ENST00000560603 KAT6BQ8WYB5 2073 aa17.12■□□□□ 0.33
MARK3-221ENST00000560603 MON2Q7Z3U7 1717 aa17.12■□□□□ 0.33
MARK3-221ENST00000560603 NME9Q86XW9 330 aa17.11■□□□□ 0.33
MARK3-221ENST00000560603 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
MARK3-221ENST00000560603 ARXQ96QS3 562 aa17.1■□□□□ 0.33
MARK3-221ENST00000560603 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
MARK3-221ENST00000560603 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
MARK3-221ENST00000560603 SGIP1Q9BQI5 828 aa17.09■□□□□ 0.33
MARK3-221ENST00000560603 USP54Q70EL1 1684 aa17.08■□□□□ 0.32
MARK3-221ENST00000560603 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
MARK3-221ENST00000560603 ZNF784Q8NCA9 323 aaPredicted RBP17.08■□□□□ 0.32
MARK3-221ENST00000560603 MAP3K5Q99683 1374 aa17.06■□□□□ 0.32
MARK3-221ENST00000560603 SLC27A3Q5K4L6 730 aa17.06■□□□□ 0.32
MARK3-221ENST00000560603 SLC16A10Q8TF71 515 aa17.06■□□□□ 0.32
MARK3-221ENST00000560603 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
MARK3-221ENST00000560603 SLC12A5Q9H2X9 1139 aa17.06■□□□□ 0.32
MARK3-221ENST00000560603 LTN1O94822 1766 aa17.06■□□□□ 0.32
MARK3-221ENST00000560603 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
MARK3-221ENST00000560603 IP6K1Q92551 441 aa17.05■□□□□ 0.32
MARK3-221ENST00000560603 BTAF1O14981 1849 aa17.05■□□□□ 0.32
MARK3-221ENST00000560603 POLD1P28340 1107 aa17.04■□□□□ 0.32
MARK3-221ENST00000560603 DDX54Q8TDD1 881 aaKnown RBP17.04■□□□□ 0.32
MARK3-221ENST00000560603 CHD4Q14839 1912 aa17.04■□□□□ 0.32
MARK3-221ENST00000560603 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
MARK3-221ENST00000560603 ZNF827Q17R98 1081 aa17.03■□□□□ 0.32
MARK3-221ENST00000560603 LRRC4BQ9NT99 713 aa17.03■□□□□ 0.32
MARK3-221ENST00000560603 GPR162Q16538 588 aa17.02■□□□□ 0.32
MARK3-221ENST00000560603 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
MARK3-221ENST00000560603 A0A1W2PP64 1363 aa17.02■□□□□ 0.31
MARK3-221ENST00000560603 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
MARK3-221ENST00000560603 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
MARK3-221ENST00000560603 COG3Q96JB2 828 aa17.01■□□□□ 0.31
MARK3-221ENST00000560603 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
MARK3-221ENST00000560603 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
MARK3-221ENST00000560603 FAM208AQ9UK61 1670 aaKnown RBP17■□□□□ 0.31
MARK3-221ENST00000560603 AMPHP49418 695 aa16.99■□□□□ 0.31
MARK3-221ENST00000560603 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
MARK3-221ENST00000560603 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
MARK3-221ENST00000560603 ANKRD36BQ8N2N9 1353 aa16.98■□□□□ 0.31
MARK3-221ENST00000560603 TONSLQ96HA7 1378 aa16.98■□□□□ 0.31
MARK3-221ENST00000560603 HMGB2P26583 209 aaKnown RBP16.97■□□□□ 0.31
MARK3-221ENST00000560603 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
MARK3-221ENST00000560603 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.31
MARK3-221ENST00000560603 HOXC9P31274 260 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms