RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 TRPM3Q9HCF6 1732 aaPredicted RBP29.45■■■□□ 2.3
PBX1-218ENST00000560469 HMOX1P09601 288 aa29.44■■■□□ 2.3
PBX1-218ENST00000560469 AMPHP49418 695 aa29.44■■■□□ 2.3
PBX1-218ENST00000560469 HSP90AB2PQ58FF8 381 aa29.44■■■□□ 2.3
PBX1-218ENST00000560469 RRP1P56182 461 aaKnown RBP29.43■■■□□ 2.3
PBX1-218ENST00000560469 KRT28Q7Z3Y7 464 aa29.43■■■□□ 2.3
PBX1-218ENST00000560469 KCNH5Q8NCM2 988 aa29.42■■■□□ 2.3
PBX1-218ENST00000560469 ZNF335Q9H4Z2 1342 aaPredicted RBP29.42■■■□□ 2.3
PBX1-218ENST00000560469 RGPD1P0DJD0 1748 aa29.41■■■□□ 2.3
PBX1-218ENST00000560469 RIPK4P57078 832 aa29.4■■■□□ 2.3
PBX1-218ENST00000560469 RTL1A6NKG5 1358 aa29.4■■■□□ 2.3
PBX1-218ENST00000560469 TRIM35Q9UPQ4 493 aa29.39■■■□□ 2.3
PBX1-218ENST00000560469 NFAT5O94916 1531 aa29.38■■■□□ 2.29
PBX1-218ENST00000560469 NFE2L2Q16236 605 aa29.38■■■□□ 2.29
PBX1-218ENST00000560469 ARHGEF10O15013 1369 aa29.38■■■□□ 2.29
PBX1-218ENST00000560469 XPCQ01831 940 aaPredicted RBP29.37■■■□□ 2.29
PBX1-218ENST00000560469 MYH16Q9H6N6 1097 aa29.37■■■□□ 2.29
PBX1-218ENST00000560469 IL16Q14005 1332 aa29.36■■■□□ 2.29
PBX1-218ENST00000560469 SLIT3O75094 1523 aa29.36■■■□□ 2.29
PBX1-218ENST00000560469 HOXC9P31274 260 aa29.36■■■□□ 2.29
PBX1-218ENST00000560469 PHACTR3Q96KR7 559 aa29.35■■■□□ 2.29
PBX1-218ENST00000560469 LTN1O94822 1766 aa29.35■■■□□ 2.29
PBX1-218ENST00000560469 SULT6B1Q6IMI4 303 aa29.34■■■□□ 2.29
PBX1-218ENST00000560469 NPHP3Q7Z494 1330 aa29.34■■■□□ 2.29
PBX1-218ENST00000560469 PPP4R2Q9NY27 417 aa29.34■■■□□ 2.29
PBX1-218ENST00000560469 PHRF1Q9P1Y6 1649 aaKnown RBP29.33■■■□□ 2.29
PBX1-218ENST00000560469 ALS2Q96Q42 1657 aa29.33■■■□□ 2.29
PBX1-218ENST00000560469 USP19O94966 1318 aa29.32■■■□□ 2.28
PBX1-218ENST00000560469 LMOD3Q0VAK6 560 aa29.3■■■□□ 2.28
PBX1-218ENST00000560469 LMOD2Q6P5Q4 547 aa29.3■■■□□ 2.28
PBX1-218ENST00000560469 IP6K1Q92551 441 aa29.3■■■□□ 2.28
PBX1-218ENST00000560469 IGSF1Q8N6C5 1336 aa29.29■■■□□ 2.28
PBX1-218ENST00000560469 AEBP1Q8IUX7 1158 aa29.29■■■□□ 2.28
PBX1-218ENST00000560469 GCP02774 474 aa29.28■■■□□ 2.28
PBX1-218ENST00000560469 KDRP35968 1356 aa29.28■■■□□ 2.28
PBX1-218ENST00000560469 CALD1Q05682 793 aaKnown RBP29.28■■■□□ 2.28
PBX1-218ENST00000560469 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.27■■■□□ 2.28
PBX1-218ENST00000560469 EYA1Q99502 592 aa29.26■■■□□ 2.27
PBX1-218ENST00000560469 PXDNQ92626 1479 aa29.25■■■□□ 2.27
PBX1-218ENST00000560469 DLG5Q8TDM6 1919 aa29.24■■■□□ 2.27
PBX1-218ENST00000560469 BRINP3Q76B58 766 aa29.24■■■□□ 2.27
PBX1-218ENST00000560469 PELP1Q8IZL8 1130 aaKnown RBP29.24■■■□□ 2.27
PBX1-218ENST00000560469 SLAIN2Q9P270 581 aa29.24■■■□□ 2.27
PBX1-218ENST00000560469 TNS3Q68CZ2 1445 aa29.23■■■□□ 2.27
PBX1-218ENST00000560469 ARHGEF25Q86VW2 580 aa29.23■■■□□ 2.27
PBX1-218ENST00000560469 CT47B1P0C2W7 299 aaPredicted RBP29.22■■■□□ 2.27
PBX1-218ENST00000560469 FANCIQ9NVI1 1328 aa29.22■■■□□ 2.27
PBX1-218ENST00000560469 DDX17Q92841 729 aaKnown RBP29.21■■■□□ 2.27
PBX1-218ENST00000560469 MED1Q15648 1581 aaPredicted RBP29.19■■■□□ 2.26
PBX1-218ENST00000560469 PLIN1O60240 522 aa29.18■■■□□ 2.26
PBX1-218ENST00000560469 SPATA31A3Q5VYP0 1347 aa29.18■■■□□ 2.26
PBX1-218ENST00000560469 LTV1Q96GA3 475 aaPredicted RBP29.17■■■□□ 2.26
PBX1-218ENST00000560469 TSR2Q969E8 191 aaKnown RBP29.16■■■□□ 2.26
PBX1-218ENST00000560469 ZBTB7CA1YPR0 619 aa29.15■■■□□ 2.26
PBX1-218ENST00000560469 GNAI1P63096 354 aa29.15■■■□□ 2.26
PBX1-218ENST00000560469 IFT57Q9NWB7 429 aa29.15■■■□□ 2.26
PBX1-218ENST00000560469 BCAR3O75815 825 aa29.14■■■□□ 2.26
PBX1-218ENST00000560469 RARSP54136 660 aaKnown RBP29.14■■■□□ 2.26
PBX1-218ENST00000560469 GAS2L2Q8NHY3 880 aa29.13■■■□□ 2.25
PBX1-218ENST00000560469 EXOSC9Q06265 439 aaKnown RBP29.12■■■□□ 2.25
PBX1-218ENST00000560469 SOS2Q07890 1332 aaPredicted RBP29.12■■■□□ 2.25
PBX1-218ENST00000560469 EXOC6Q8TAG9 804 aa29.12■■■□□ 2.25
PBX1-218ENST00000560469 PLEKHG5O94827 1062 aa29.11■■■□□ 2.25
PBX1-218ENST00000560469 ZNF853P0CG23 659 aa29.11■■■□□ 2.25
PBX1-218ENST00000560469 MTHFSDQ2M296 383 aaKnown RBP29.1■■■□□ 2.25
PBX1-218ENST00000560469 THUMPD2Q9BTF0 503 aaKnown RBP29.1■■■□□ 2.25
PBX1-218ENST00000560469 CRYBG1Q9Y4K1 1723 aa29.09■■■□□ 2.25
PBX1-218ENST00000560469 CFAP44Q96MT7 982 aa29.09■■■□□ 2.25
PBX1-218ENST00000560469 LAS1LQ9Y4W2 734 aaKnown RBP29.09■■■□□ 2.25
PBX1-218ENST00000560469 FAM83GA6ND36 823 aa29.08■■■□□ 2.25
PBX1-218ENST00000560469 B4GALNT3Q6L9W6 998 aa29.08■■■□□ 2.25
PBX1-218ENST00000560469 ABCC6O95255 1503 aa29.08■■■□□ 2.25
PBX1-218ENST00000560469 NBPF6Q5VWK0 638 aa29.07■■■□□ 2.24
PBX1-218ENST00000560469 NBPF4Q96M43 638 aa29.07■■■□□ 2.24
PBX1-218ENST00000560469 HTATSF1O43719 755 aaKnown RBP29.06■■■□□ 2.24
PBX1-218ENST00000560469 ZC3H6P61129 1189 aaKnown RBP29.06■■■□□ 2.24
PBX1-218ENST00000560469 ANKRD24Q8TF21 1146 aa29.06■■■□□ 2.24
PBX1-218ENST00000560469 CRBNQ96SW2 442 aa29.06■■■□□ 2.24
PBX1-218ENST00000560469 NHSL1Q5SYE7 1610 aa29.06■■■□□ 2.24
PBX1-218ENST00000560469 CCDC136Q96JN2 1154 aa29.05■■■□□ 2.24
PBX1-218ENST00000560469 NCAPD2Q15021 1401 aa29.05■■■□□ 2.24
PBX1-218ENST00000560469 DCTN1Q14203 1278 aa29.05■■■□□ 2.24
PBX1-218ENST00000560469 C20orf194Q5TEA3 1177 aa29.05■■■□□ 2.24
PBX1-218ENST00000560469 RTF1Q92541 710 aaKnown RBP29.05■■■□□ 2.24
PBX1-218ENST00000560469 ZNF428Q96B54 188 aa29.05■■■□□ 2.24
PBX1-218ENST00000560469 PDE3AQ14432 1141 aa29.04■■■□□ 2.24
PBX1-218ENST00000560469 CAMTA1Q9Y6Y1 1673 aa29.03■■■□□ 2.24
PBX1-218ENST00000560469 RGPD2P0DJD1 1756 aa29.03■■■□□ 2.24
PBX1-218ENST00000560469 CANXP27824 592 aaKnown RBP29.02■■■□□ 2.24
PBX1-218ENST00000560469 USHBP1Q8N6Y0 703 aa29.02■■■□□ 2.24
PBX1-218ENST00000560469 MBIPQ9NS73 344 aa29.02■■■□□ 2.24
PBX1-218ENST00000560469 AXIN2Q9Y2T1 843 aa29.02■■■□□ 2.24
PBX1-218ENST00000560469 CPDO75976 1380 aa29.02■■■□□ 2.24
PBX1-218ENST00000560469 LTBP4Q8N2S1 1624 aa29.02■■■□□ 2.24
PBX1-218ENST00000560469 COL18A1P39060 1754 aa29.01■■■□□ 2.23
PBX1-218ENST00000560469 MCM10Q7L590 875 aa29.01■■■□□ 2.23
PBX1-218ENST00000560469 RGPD5Q99666 1765 aa29.01■■■□□ 2.23
PBX1-218ENST00000560469 CABLES1Q8TDN4 633 aa29■■■□□ 2.23
PBX1-218ENST00000560469 LRRC59Q96AG4 307 aaKnown RBP29■■■□□ 2.23
PBX1-218ENST00000560469 ERBB3P21860 1342 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms