RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 USP19O94966 1318 aa9.68□□□□□ -0.86
HMBOX1-214ENST00000560357 SPATA31A3Q5VYP0 1347 aa9.68□□□□□ -0.86
HMBOX1-214ENST00000560357 WDR43Q15061 677 aaKnown RBP eCLIP9.68□□□□□ -0.86
HMBOX1-214ENST00000560357 NHSL1Q5SYE7 1610 aa9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 CDK12Q9NYV4 1490 aaPredicted RBP9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 TNS3Q68CZ2 1445 aa9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 MAP3K19Q56UN5 1328 aa9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 SOX12O15370 315 aa9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 LMOD2Q6P5Q4 547 aa9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 KCNH5Q8NCM2 988 aa9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 CLEC11AQ9Y240 323 aa9.67□□□□□ -0.86
HMBOX1-214ENST00000560357 SLIT3O75094 1523 aa9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 PEAK1Q9H792 1746 aa9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 GCP02774 474 aa9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 HNRNPUQ00839 825 aaKnown RBP eCLIP9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 ROBO1Q9Y6N7 1651 aa9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 NFAT5O94916 1531 aa9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
HMBOX1-214ENST00000560357 BLMP54132 1417 aaPredicted RBP9.65□□□□□ -0.86
HMBOX1-214ENST00000560357 ARHGEF10O15013 1369 aa9.65□□□□□ -0.86
HMBOX1-214ENST00000560357 TOM1O60784 492 aa9.65□□□□□ -0.86
HMBOX1-214ENST00000560357 SP7Q8TDD2 431 aaPredicted RBP9.65□□□□□ -0.86
HMBOX1-214ENST00000560357 NUDCQ9Y266 331 aa9.65□□□□□ -0.86
HMBOX1-214ENST00000560357 MED1Q15648 1581 aaPredicted RBP9.65□□□□□ -0.86
HMBOX1-214ENST00000560357 KIF24Q5T7B8 1368 aa9.64□□□□□ -0.87
HMBOX1-214ENST00000560357 AHDC1Q5TGY3 1603 aaPredicted RBP9.64□□□□□ -0.87
HMBOX1-214ENST00000560357 IL13P35225 146 aa9.64□□□□□ -0.87
HMBOX1-214ENST00000560357 CERKQ8TCT0 537 aa9.64□□□□□ -0.87
HMBOX1-214ENST00000560357 FLT4P35916 1363 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 LTN1O94822 1766 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 CRYBG1Q9Y4K1 1723 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 PLEKHG5O94827 1062 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 U2AF1L5P0DN76 240 aaPredicted RBP9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 HOXC9P31274 260 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 AMPHP49418 695 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 U2AF1Q01081 240 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 EIF4A2Q14240 407 aaKnown RBP9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 HSP90AB2PQ58FF8 381 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 ARHGEF25Q86VW2 580 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 CABLES1Q8TDN4 633 aa9.63□□□□□ -0.87
HMBOX1-214ENST00000560357 UBAP1LF5GYI3 381 aa9.62□□□□□ -0.87
HMBOX1-214ENST00000560357 PRKAR2AP13861 404 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-214ENST00000560357 IP6K1Q92551 441 aa9.62□□□□□ -0.87
HMBOX1-214ENST00000560357 PHRF1Q9P1Y6 1649 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-214ENST00000560357 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
HMBOX1-214ENST00000560357 ZBED9Q6R2W3 1325 aa9.61□□□□□ -0.87
HMBOX1-214ENST00000560357 SENP3-EIF4A1A0A087X0R7 540 aa9.61□□□□□ -0.87
HMBOX1-214ENST00000560357 HAX1O00165 279 aa9.61□□□□□ -0.87
HMBOX1-214ENST00000560357 CENPBP07199 599 aaPredicted RBP9.61□□□□□ -0.87
HMBOX1-214ENST00000560357 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
HMBOX1-214ENST00000560357 CCDC146Q8IYE0 955 aa9.61□□□□□ -0.87
HMBOX1-214ENST00000560357 LRRC59Q96AG4 307 aaKnown RBP9.61□□□□□ -0.87
HMBOX1-214ENST00000560357 FCHSD2O94868 740 aa9.6□□□□□ -0.87
HMBOX1-214ENST00000560357 ZC3H6P61129 1189 aaKnown RBP9.6□□□□□ -0.87
HMBOX1-214ENST00000560357 RUNDC1Q96C34 613 aa9.6□□□□□ -0.87
HMBOX1-214ENST00000560357 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
HMBOX1-214ENST00000560357 PHLPP1O60346 1717 aa9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 APAF1O14727 1248 aa9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 COL18A1P39060 1754 aa9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 CPDO75976 1380 aa9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 COL16A1Q07092 1604 aaPredicted RBP9.59□□□□□ -0.87
HMBOX1-214ENST00000560357 HMOX1P09601 288 aa9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 PRR29P0C7W0 189 aa9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 TCP11L2Q8N4U5 519 aa9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 EYA1Q99502 592 aa9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 ABCA3Q99758 1704 aa9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 RGPD5Q99666 1765 aa9.58□□□□□ -0.88
HMBOX1-214ENST00000560357 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 COL22A1Q8NFW1 1626 aaPredicted RBP9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 PRKAR2BP31323 418 aa9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 SULT6B1Q6IMI4 303 aa9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 NGEFQ8N5V2 710 aa9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
HMBOX1-214ENST00000560357 KDRP35968 1356 aa9.56□□□□□ -0.88
HMBOX1-214ENST00000560357 CHRNA2Q15822 529 aa9.56□□□□□ -0.88
HMBOX1-214ENST00000560357 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
HMBOX1-214ENST00000560357 PHACTR3Q96KR7 559 aa9.56□□□□□ -0.88
HMBOX1-214ENST00000560357 ABCC6O95255 1503 aa9.56□□□□□ -0.88
HMBOX1-214ENST00000560357 ZNF521Q96K83 1311 aa9.56□□□□□ -0.88
HMBOX1-214ENST00000560357 TMPOP42166 694 aaKnown RBP9.55□□□□□ -0.88
HMBOX1-214ENST00000560357 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
HMBOX1-214ENST00000560357 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
HMBOX1-214ENST00000560357 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
HMBOX1-214ENST00000560357 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
HMBOX1-214ENST00000560357 RGPD2P0DJD1 1756 aa9.55□□□□□ -0.88
HMBOX1-214ENST00000560357 MAPK8IP3Q9UPT6 1336 aa9.55□□□□□ -0.88
HMBOX1-214ENST00000560357 PDE3BQ13370 1112 aa9.54□□□□□ -0.88
HMBOX1-214ENST00000560357 CCDC27Q2M243 656 aa9.54□□□□□ -0.88
HMBOX1-214ENST00000560357 PRDM11Q9NQV5 511 aa9.54□□□□□ -0.88
HMBOX1-214ENST00000560357 RRP7AQ9Y3A4 280 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms