RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 VSIG10Q8N0Z9 540 aa21.62■■□□□ 1.05
PBX1-215ENST00000559240 PAK3O75914 559 aaPredicted RBP21.6■■□□□ 1.05
PBX1-215ENST00000559240 TNNT2P45379 298 aaPredicted RBP21.6■■□□□ 1.05
PBX1-215ENST00000559240 FLT4P35916 1363 aa21.59■■□□□ 1.05
PBX1-215ENST00000559240 TOM1O60784 492 aa21.59■■□□□ 1.05
PBX1-215ENST00000559240 COL16A1Q07092 1604 aaPredicted RBP21.59■■□□□ 1.05
PBX1-215ENST00000559240 PHLPP1O60346 1717 aa21.57■■□□□ 1.04
PBX1-215ENST00000559240 MAP3K19Q56UN5 1328 aa21.56■■□□□ 1.04
PBX1-215ENST00000559240 WDR43Q15061 677 aaKnown RBP eCLIP21.56■■□□□ 1.04
PBX1-215ENST00000559240 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
PBX1-215ENST00000559240 FAM9BQ8IZU0 186 aa21.56■■□□□ 1.04
PBX1-215ENST00000559240 EMILIN1Q9Y6C2 1016 aa21.56■■□□□ 1.04
PBX1-215ENST00000559240 COL18A1P39060 1754 aa21.55■■□□□ 1.04
PBX1-215ENST00000559240 CPDO75976 1380 aa21.55■■□□□ 1.04
PBX1-215ENST00000559240 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
PBX1-215ENST00000559240 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
PBX1-215ENST00000559240 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
PBX1-215ENST00000559240 CAMTA1Q9Y6Y1 1673 aa21.54■■□□□ 1.04
PBX1-215ENST00000559240 DIAPH1O60610 1272 aaKnown RBP21.54■■□□□ 1.04
PBX1-215ENST00000559240 CERKQ8TCT0 537 aa21.54■■□□□ 1.04
PBX1-215ENST00000559240 ADAMTS8Q9UP79 889 aa21.53■■□□□ 1.04
PBX1-215ENST00000559240 NOP58Q9Y2X3 529 aaKnown RBP21.53■■□□□ 1.04
PBX1-215ENST00000559240 GCP02774 474 aa21.53■■□□□ 1.04
PBX1-215ENST00000559240 IL13P35225 146 aa21.53■■□□□ 1.04
PBX1-215ENST00000559240 DDX17Q92841 729 aaKnown RBP21.53■■□□□ 1.04
PBX1-215ENST00000559240 RRS1Q15050 365 aaKnown RBP21.52■■□□□ 1.04
PBX1-215ENST00000559240 NGEFQ8N5V2 710 aa21.52■■□□□ 1.04
PBX1-215ENST00000559240 FAM208AQ9UK61 1670 aaKnown RBP21.52■■□□□ 1.04
PBX1-215ENST00000559240 ARHGEF25Q86VW2 580 aa21.51■■□□□ 1.03
PBX1-215ENST00000559240 ZBED9Q6R2W3 1325 aa21.5■■□□□ 1.03
PBX1-215ENST00000559240 IP6K1Q92551 441 aa21.5■■□□□ 1.03
PBX1-215ENST00000559240 FBLN1P23142 703 aa21.49■■□□□ 1.03
PBX1-215ENST00000559240 LRRC59Q96AG4 307 aaKnown RBP21.49■■□□□ 1.03
PBX1-215ENST00000559240 LMO7Q8WWI1 1683 aa21.49■■□□□ 1.03
PBX1-215ENST00000559240 HOXC9P31274 260 aa21.49■■□□□ 1.03
PBX1-215ENST00000559240 NCAPD2Q15021 1401 aa21.49■■□□□ 1.03
PBX1-215ENST00000559240 NUTM2GQ5VZR2 741 aa21.49■■□□□ 1.03
PBX1-215ENST00000559240 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
PBX1-215ENST00000559240 FCHSD2O94868 740 aa21.46■■□□□ 1.03
PBX1-215ENST00000559240 EIF4A2Q14240 407 aaKnown RBP21.46■■□□□ 1.03
PBX1-215ENST00000559240 GLIPR1L2Q4G1C9 344 aa21.45■■□□□ 1.02
PBX1-215ENST00000559240 KDRP35968 1356 aa21.45■■□□□ 1.02
PBX1-215ENST00000559240 AMPHP49418 695 aa21.45■■□□□ 1.02
PBX1-215ENST00000559240 PLEKHG2Q9H7P9 1386 aa21.45■■□□□ 1.02
PBX1-215ENST00000559240 RUNDC1Q96C34 613 aa21.44■■□□□ 1.02
PBX1-215ENST00000559240 HNRNPUQ00839 825 aaKnown RBP eCLIP21.43■■□□□ 1.02
PBX1-215ENST00000559240 PLEKHF1Q96S99 279 aa21.43■■□□□ 1.02
PBX1-215ENST00000559240 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
PBX1-215ENST00000559240 HSP90AB2PQ58FF8 381 aa21.43■■□□□ 1.02
PBX1-215ENST00000559240 IGSF1Q8N6C5 1336 aa21.43■■□□□ 1.02
PBX1-215ENST00000559240 PPM1GO15355 546 aaPredicted RBP21.42■■□□□ 1.02
PBX1-215ENST00000559240 LMOD2Q6P5Q4 547 aa21.42■■□□□ 1.02
PBX1-215ENST00000559240 COL14A1Q05707 1796 aaKnown RBP21.41■■□□□ 1.02
PBX1-215ENST00000559240 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
PBX1-215ENST00000559240 U2AF1L5P0DN76 240 aaPredicted RBP21.41■■□□□ 1.02
PBX1-215ENST00000559240 U2AF1Q01081 240 aaKnown RBP eCLIP21.41■■□□□ 1.02
PBX1-215ENST00000559240 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
PBX1-215ENST00000559240 BRPF3Q9ULD4 1205 aa21.41■■□□□ 1.02
PBX1-215ENST00000559240 PDE4CQ08493 712 aa21.38■■□□□ 1.01
PBX1-215ENST00000559240 CCDC27Q2M243 656 aa21.38■■□□□ 1.01
PBX1-215ENST00000559240 ZNF521Q96K83 1311 aa21.37■■□□□ 1.01
PBX1-215ENST00000559240 PHF23Q9BUL5 403 aaPredicted RBP21.37■■□□□ 1.01
PBX1-215ENST00000559240 U2SURPO15042 1029 aaKnown RBP21.37■■□□□ 1.01
PBX1-215ENST00000559240 SOX12O15370 315 aa21.37■■□□□ 1.01
PBX1-215ENST00000559240 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
PBX1-215ENST00000559240 PDE3BQ13370 1112 aa21.36■■□□□ 1.01
PBX1-215ENST00000559240 RGPD2P0DJD1 1756 aa21.35■■□□□ 1.01
PBX1-215ENST00000559240 IRX6P78412 446 aaPredicted RBP21.34■■□□□ 1.01
PBX1-215ENST00000559240 ERBB3P21860 1342 aa21.33■■□□□ 1.01
PBX1-215ENST00000559240 EYA1Q99502 592 aa21.33■■□□□ 1.01
PBX1-215ENST00000559240 CABLES1Q8TDN4 633 aa21.33■■□□□ 1
PBX1-215ENST00000559240 NWD2Q9ULI1 1742 aa21.32■■□□□ 1
PBX1-215ENST00000559240 JCADQ9P266 1359 aa21.32■■□□□ 1
PBX1-215ENST00000559240 COL5A2P05997 1499 aaPredicted RBP21.31■■□□□ 1
PBX1-215ENST00000559240 PIP4K2BP78356 416 aa21.31■■□□□ 1
PBX1-215ENST00000559240 TCP11L2Q8N4U5 519 aa21.31■■□□□ 1
PBX1-215ENST00000559240 AXIN2Q9Y2T1 843 aa21.31■■□□□ 1
PBX1-215ENST00000559240 APAF1O14727 1248 aa21.3■■□□□ 1
PBX1-215ENST00000559240 ZC3H6P61129 1189 aaKnown RBP21.3■■□□□ 1
PBX1-215ENST00000559240 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
PBX1-215ENST00000559240 PLCH1Q4KWH8 1693 aa21.3■■□□□ 1
PBX1-215ENST00000559240 RBM10P98175 930 aaKnown RBP21.3■■□□□ 1
PBX1-215ENST00000559240 ANKRD24Q8TF21 1146 aa21.3■■□□□ 1
PBX1-215ENST00000559240 MAPK8IP3Q9UPT6 1336 aa21.3■■□□□ 1
PBX1-215ENST00000559240 NRAPQ86VF7 1730 aa21.3■■□□□ 1
PBX1-215ENST00000559240 PRKAR2BP31323 418 aa21.3■■□□□ 1
PBX1-215ENST00000559240 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
PBX1-215ENST00000559240 FGD1P98174 961 aa21.29■■□□□ 1
PBX1-215ENST00000559240 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
PBX1-215ENST00000559240 NEFMP07197 916 aa21.27■■□□□ 1
PBX1-215ENST00000559240 TMPOP42166 694 aaKnown RBP21.27■■□□□ 1
PBX1-215ENST00000559240 PRDM11Q9NQV5 511 aa21.26■□□□□ 0.99
PBX1-215ENST00000559240 NFE2L2Q16236 605 aa21.26■□□□□ 0.99
PBX1-215ENST00000559240 SPATA31A6Q5VVP1 1343 aa21.26■□□□□ 0.99
PBX1-215ENST00000559240 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
PBX1-215ENST00000559240 HMOX1P09601 288 aa21.26■□□□□ 0.99
PBX1-215ENST00000559240 NBPF6Q5VWK0 638 aa21.25■□□□□ 0.99
PBX1-215ENST00000559240 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
PBX1-215ENST00000559240 NBPF4Q96M43 638 aa21.25■□□□□ 0.99
PBX1-215ENST00000559240 PARP4Q9UKK3 1724 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms