RNA–Protein interactions for RNA: ENST00000558005.1

CRTC3-203, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-203ENST00000558005 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
CRTC3-203ENST00000558005 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
CRTC3-203ENST00000558005 WNK3Q9BYP7 1800 aa17.22■□□□□ 0.35
CRTC3-203ENST00000558005 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
CRTC3-203ENST00000558005 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
CRTC3-203ENST00000558005 SBF2Q86WG5 1849 aa17.21■□□□□ 0.35
CRTC3-203ENST00000558005 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
CRTC3-203ENST00000558005 CABP2Q9NPB3 220 aa17.21■□□□□ 0.35
CRTC3-203ENST00000558005 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
CRTC3-203ENST00000558005 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
CRTC3-203ENST00000558005 CARD10Q9BWT7 1032 aa17.2■□□□□ 0.34
CRTC3-203ENST00000558005 STK32BQ9NY57 414 aa17.2■□□□□ 0.34
CRTC3-203ENST00000558005 CABP1Q9NZU7 370 aa17.2■□□□□ 0.34
CRTC3-203ENST00000558005 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
CRTC3-203ENST00000558005 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
CRTC3-203ENST00000558005 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
CRTC3-203ENST00000558005 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
CRTC3-203ENST00000558005 COL18A1P39060 1754 aa17.17■□□□□ 0.34
CRTC3-203ENST00000558005 TNS2Q63HR2 1409 aa17.16■□□□□ 0.34
CRTC3-203ENST00000558005 EXOC5O00471 708 aa17.16■□□□□ 0.34
CRTC3-203ENST00000558005 ARHGEF25Q86VW2 580 aa17.16■□□□□ 0.34
CRTC3-203ENST00000558005 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
CRTC3-203ENST00000558005 MTFR1LQ9H019 292 aa17.14■□□□□ 0.33
CRTC3-203ENST00000558005 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
CRTC3-203ENST00000558005 TTC21BQ7Z4L5 1316 aa17.14■□□□□ 0.33
CRTC3-203ENST00000558005 TXNRD1Q16881 649 aa17.13■□□□□ 0.33
CRTC3-203ENST00000558005 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
CRTC3-203ENST00000558005 NFAT5O94916 1531 aa17.11■□□□□ 0.33
CRTC3-203ENST00000558005 NHSQ6T4R5 1651 aa17.11■□□□□ 0.33
CRTC3-203ENST00000558005 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
CRTC3-203ENST00000558005 MYOM1P52179 1685 aa17.1■□□□□ 0.33
CRTC3-203ENST00000558005 ZBTB7AO95365 584 aa17.1■□□□□ 0.33
CRTC3-203ENST00000558005 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
CRTC3-203ENST00000558005 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
CRTC3-203ENST00000558005 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
CRTC3-203ENST00000558005 SBNO2Q9Y2G9 1366 aa17.1■□□□□ 0.33
CRTC3-203ENST00000558005 PTGER2P43116 358 aa17.09■□□□□ 0.33
CRTC3-203ENST00000558005 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
CRTC3-203ENST00000558005 USP31Q70CQ4 1352 aa17.07■□□□□ 0.32
CRTC3-203ENST00000558005 PROM2Q8N271 834 aa17.07■□□□□ 0.32
CRTC3-203ENST00000558005 MON2Q7Z3U7 1717 aa17.07■□□□□ 0.32
CRTC3-203ENST00000558005 ERBB3P21860 1342 aa17.06■□□□□ 0.32
CRTC3-203ENST00000558005 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
CRTC3-203ENST00000558005 IL2RBP14784 551 aa17.05■□□□□ 0.32
CRTC3-203ENST00000558005 SYT17Q9BSW7 474 aa17.05■□□□□ 0.32
CRTC3-203ENST00000558005 FHDC1Q9C0D6 1143 aaPredicted RBP17.05■□□□□ 0.32
CRTC3-203ENST00000558005 CHD4Q14839 1912 aa17.05■□□□□ 0.32
CRTC3-203ENST00000558005 SOX12O15370 315 aa17.04■□□□□ 0.32
CRTC3-203ENST00000558005 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
CRTC3-203ENST00000558005 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
CRTC3-203ENST00000558005 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
CRTC3-203ENST00000558005 ARXQ96QS3 562 aa17.04■□□□□ 0.32
CRTC3-203ENST00000558005 NLRP2Q9NX02 1062 aa17.04■□□□□ 0.32
CRTC3-203ENST00000558005 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
CRTC3-203ENST00000558005 RGPD5Q99666 1765 aa17.04■□□□□ 0.32
CRTC3-203ENST00000558005 SLC27A3Q5K4L6 730 aa17.03■□□□□ 0.32
CRTC3-203ENST00000558005 PTF1AQ7RTS3 328 aa17.03■□□□□ 0.32
CRTC3-203ENST00000558005 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
CRTC3-203ENST00000558005 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
CRTC3-203ENST00000558005 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
CRTC3-203ENST00000558005 POLD1P28340 1107 aa17.01■□□□□ 0.31
CRTC3-203ENST00000558005 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
CRTC3-203ENST00000558005 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
CRTC3-203ENST00000558005 PDGFDQ9GZP0 370 aaPredicted RBP17■□□□□ 0.31
CRTC3-203ENST00000558005 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
CRTC3-203ENST00000558005 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
CRTC3-203ENST00000558005 BTAF1O14981 1849 aa16.99■□□□□ 0.31
CRTC3-203ENST00000558005 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
CRTC3-203ENST00000558005 LTN1O94822 1766 aa16.98■□□□□ 0.31
CRTC3-203ENST00000558005 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
CRTC3-203ENST00000558005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.97■□□□□ 0.31
CRTC3-203ENST00000558005 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
CRTC3-203ENST00000558005 ACSBG1Q96GR2 724 aa16.96■□□□□ 0.31
CRTC3-203ENST00000558005 GPR162Q16538 588 aa16.95■□□□□ 0.3
CRTC3-203ENST00000558005 SENP3-EIF4A1A0A087X0R7 540 aa16.94■□□□□ 0.3
CRTC3-203ENST00000558005 C1QTNF8P60827 252 aa16.94■□□□□ 0.3
CRTC3-203ENST00000558005 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
CRTC3-203ENST00000558005 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
CRTC3-203ENST00000558005 NME9Q86XW9 330 aa16.93■□□□□ 0.3
CRTC3-203ENST00000558005 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
CRTC3-203ENST00000558005 IP6K1Q92551 441 aa16.92■□□□□ 0.3
CRTC3-203ENST00000558005 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
CRTC3-203ENST00000558005 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
CRTC3-203ENST00000558005 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
CRTC3-203ENST00000558005 CD163L1Q9NR16 1453 aa16.92■□□□□ 0.3
CRTC3-203ENST00000558005 COL24A1Q17RW2 1714 aa16.91■□□□□ 0.3
CRTC3-203ENST00000558005 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
CRTC3-203ENST00000558005 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
CRTC3-203ENST00000558005 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
CRTC3-203ENST00000558005 TFCP2L1Q9NZI6 479 aa16.91■□□□□ 0.3
CRTC3-203ENST00000558005 RTL1A6NKG5 1358 aa16.89■□□□□ 0.3
CRTC3-203ENST00000558005 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
CRTC3-203ENST00000558005 SMG6Q86US8 1419 aaKnown RBP16.88■□□□□ 0.29
CRTC3-203ENST00000558005 DDX54Q8TDD1 881 aaKnown RBP16.88■□□□□ 0.29
CRTC3-203ENST00000558005 COG3Q96JB2 828 aa16.88■□□□□ 0.29
CRTC3-203ENST00000558005 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
CRTC3-203ENST00000558005 UTRNP46939 3433 aa16.88■□□□□ 0.29
CRTC3-203ENST00000558005 NEUROD1Q13562 356 aa16.87■□□□□ 0.29
CRTC3-203ENST00000558005 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
CRTC3-203ENST00000558005 PNPLA7Q6ZV29 1317 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms