RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 BCL11BQ9C0K0 894 aaPredicted RBP26.68■■□□□ 1.86
ABCD4-228ENST00000557588 MYOM1P52179 1685 aa26.68■■□□□ 1.86
ABCD4-228ENST00000557588 CABP2Q9NPB3 220 aa26.67■■□□□ 1.86
ABCD4-228ENST00000557588 CPSF1Q10570 1443 aaKnown RBP26.66■■□□□ 1.86
ABCD4-228ENST00000557588 WDR17Q8IZU2 1322 aa26.65■■□□□ 1.86
ABCD4-228ENST00000557588 UTRNP46939 3433 aa26.65■■□□□ 1.86
ABCD4-228ENST00000557588 NLRP6P59044 892 aa26.65■■□□□ 1.86
ABCD4-228ENST00000557588 ZBTB7CA1YPR0 619 aa26.64■■□□□ 1.86
ABCD4-228ENST00000557588 TOM1L2Q6ZVM7 507 aa26.64■■□□□ 1.86
ABCD4-228ENST00000557588 PTF1AQ7RTS3 328 aa26.63■■□□□ 1.85
ABCD4-228ENST00000557588 CDCA7Q9BWT1 371 aaPredicted RBP26.62■■□□□ 1.85
ABCD4-228ENST00000557588 MARCH10Q8NA82 808 aaPredicted RBP26.61■■□□□ 1.85
ABCD4-228ENST00000557588 CABP1Q9NZU7 370 aa26.61■■□□□ 1.85
ABCD4-228ENST00000557588 PROM2Q8N271 834 aa26.6■■□□□ 1.85
ABCD4-228ENST00000557588 RGPD5Q99666 1765 aa26.6■■□□□ 1.85
ABCD4-228ENST00000557588 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
ABCD4-228ENST00000557588 ABCC6O95255 1503 aa26.6■■□□□ 1.85
ABCD4-228ENST00000557588 PDGFDQ9GZP0 370 aaPredicted RBP26.59■■□□□ 1.85
ABCD4-228ENST00000557588 AXIN2Q9Y2T1 843 aa26.59■■□□□ 1.85
ABCD4-228ENST00000557588 PTGER2P43116 358 aa26.58■■□□□ 1.85
ABCD4-228ENST00000557588 NFAT5O94916 1531 aa26.57■■□□□ 1.84
ABCD4-228ENST00000557588 NHSQ6T4R5 1651 aa26.57■■□□□ 1.84
ABCD4-228ENST00000557588 ZBTB7AO95365 584 aa26.56■■□□□ 1.84
ABCD4-228ENST00000557588 TNS2Q63HR2 1409 aa26.56■■□□□ 1.84
ABCD4-228ENST00000557588 ARHGEF25Q86VW2 580 aa26.55■■□□□ 1.84
ABCD4-228ENST00000557588 CARD10Q9BWT7 1032 aa26.55■■□□□ 1.84
ABCD4-228ENST00000557588 TXNRD1Q16881 649 aa26.53■■□□□ 1.84
ABCD4-228ENST00000557588 KCNH5Q8NCM2 988 aa26.53■■□□□ 1.84
ABCD4-228ENST00000557588 PAPPAQ13219 1627 aa26.53■■□□□ 1.84
ABCD4-228ENST00000557588 STK32BQ9NY57 414 aa26.52■■□□□ 1.84
ABCD4-228ENST00000557588 CCDC7Q96M83 1385 aa26.51■■□□□ 1.83
ABCD4-228ENST00000557588 TTC21BQ7Z4L5 1316 aa26.51■■□□□ 1.83
ABCD4-228ENST00000557588 EVC2Q86UK5 1308 aa26.51■■□□□ 1.83
ABCD4-228ENST00000557588 SLC15A2Q16348 729 aa26.5■■□□□ 1.83
ABCD4-228ENST00000557588 TTC21AQ8NDW8 1320 aa26.49■■□□□ 1.83
ABCD4-228ENST00000557588 USP54Q70EL1 1684 aa26.49■■□□□ 1.83
ABCD4-228ENST00000557588 MON2Q7Z3U7 1717 aa26.48■■□□□ 1.83
ABCD4-228ENST00000557588 CSB-PGBD3P0DP91 1061 aa26.48■■□□□ 1.83
ABCD4-228ENST00000557588 ATF5Q9Y2D1 282 aaPredicted RBP26.48■■□□□ 1.83
ABCD4-228ENST00000557588 ZNF784Q8NCA9 323 aaPredicted RBP26.47■■□□□ 1.83
ABCD4-228ENST00000557588 SGIP1Q9BQI5 828 aa26.47■■□□□ 1.83
ABCD4-228ENST00000557588 ZNF692Q9BU19 519 aaPredicted RBP26.47■■□□□ 1.83
ABCD4-228ENST00000557588 MTFR1LQ9H019 292 aa26.47■■□□□ 1.83
ABCD4-228ENST00000557588 EXOC5O00471 708 aa26.46■■□□□ 1.83
ABCD4-228ENST00000557588 FHDC1Q9C0D6 1143 aaPredicted RBP26.46■■□□□ 1.83
ABCD4-228ENST00000557588 CHD4Q14839 1912 aa26.45■■□□□ 1.83
ABCD4-228ENST00000557588 SYT17Q9BSW7 474 aa26.45■■□□□ 1.82
ABCD4-228ENST00000557588 SOX12O15370 315 aa26.43■■□□□ 1.82
ABCD4-228ENST00000557588 MAP3K5Q99683 1374 aa26.43■■□□□ 1.82
ABCD4-228ENST00000557588 BTAF1O14981 1849 aa26.42■■□□□ 1.82
ABCD4-228ENST00000557588 KTN1Q86UP2 1357 aaKnown RBP26.4■■□□□ 1.82
ABCD4-228ENST00000557588 LTN1O94822 1766 aa26.4■■□□□ 1.82
ABCD4-228ENST00000557588 ERBB3P21860 1342 aa26.39■■□□□ 1.81
ABCD4-228ENST00000557588 USP31Q70CQ4 1352 aa26.38■■□□□ 1.81
ABCD4-228ENST00000557588 QSER1Q2KHR3 1735 aa26.36■■□□□ 1.81
ABCD4-228ENST00000557588 L3MBTL2Q969R5 705 aa26.36■■□□□ 1.81
ABCD4-228ENST00000557588 ROCK2O75116 1388 aaKnown RBP26.35■■□□□ 1.81
ABCD4-228ENST00000557588 ARXQ96QS3 562 aa26.35■■□□□ 1.81
ABCD4-228ENST00000557588 COL24A1Q17RW2 1714 aa26.34■■□□□ 1.81
ABCD4-228ENST00000557588 ACSBG1Q96GR2 724 aa26.33■■□□□ 1.81
ABCD4-228ENST00000557588 CD163L1Q9NR16 1453 aa26.32■■□□□ 1.8
ABCD4-228ENST00000557588 SBNO2Q9Y2G9 1366 aa26.32■■□□□ 1.8
ABCD4-228ENST00000557588 IL2RBP14784 551 aa26.31■■□□□ 1.8
ABCD4-228ENST00000557588 ZNF827Q17R98 1081 aa26.31■■□□□ 1.8
ABCD4-228ENST00000557588 NLRP2Q9NX02 1062 aa26.3■■□□□ 1.8
ABCD4-228ENST00000557588 GOLGB1Q14789 3259 aaKnown RBP26.3■■□□□ 1.8
ABCD4-228ENST00000557588 FAM208AQ9UK61 1670 aaKnown RBP26.29■■□□□ 1.8
ABCD4-228ENST00000557588 LRRC4BQ9NT99 713 aa26.27■■□□□ 1.8
ABCD4-228ENST00000557588 TUBGCP6Q96RT7 1819 aa26.26■■□□□ 1.79
ABCD4-228ENST00000557588 C1QTNF8P60827 252 aa26.26■■□□□ 1.79
ABCD4-228ENST00000557588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.26■■□□□ 1.79
ABCD4-228ENST00000557588 SENP3-EIF4A1A0A087X0R7 540 aa26.25■■□□□ 1.79
ABCD4-228ENST00000557588 NME9Q86XW9 330 aa26.25■■□□□ 1.79
ABCD4-228ENST00000557588 ANKRD24Q8TF21 1146 aa26.24■■□□□ 1.79
ABCD4-228ENST00000557588 AKT1S1Q96B36 256 aa26.24■■□□□ 1.79
ABCD4-228ENST00000557588 SLC16A10Q8TF71 515 aa26.23■■□□□ 1.79
ABCD4-228ENST00000557588 EDC4Q6P2E9 1401 aaKnown RBP26.22■■□□□ 1.79
ABCD4-228ENST00000557588 SLC27A3Q5K4L6 730 aa26.22■■□□□ 1.79
ABCD4-228ENST00000557588 LY75O60449 1722 aa26.21■■□□□ 1.79
ABCD4-228ENST00000557588 DOT1LQ8TEK3 1739 aa26.21■■□□□ 1.79
ABCD4-228ENST00000557588 KAT6BQ8WYB5 2073 aa26.21■■□□□ 1.79
ABCD4-228ENST00000557588 PNPLA7Q6ZV29 1317 aa26.19■■□□□ 1.78
ABCD4-228ENST00000557588 GPR162Q16538 588 aa26.19■■□□□ 1.78
ABCD4-228ENST00000557588 SHANK3Q9BYB0 1731 aa26.18■■□□□ 1.78
ABCD4-228ENST00000557588 POLD1P28340 1107 aa26.17■■□□□ 1.78
ABCD4-228ENST00000557588 SIN3AQ96ST3 1273 aa26.16■■□□□ 1.78
ABCD4-228ENST00000557588 A0A1W2PP64 1363 aa26.16■■□□□ 1.78
ABCD4-228ENST00000557588 HDGFL2Q7Z4V5 671 aaPredicted RBP26.15■■□□□ 1.78
ABCD4-228ENST00000557588 ANKRD36BQ8N2N9 1353 aa26.15■■□□□ 1.78
ABCD4-228ENST00000557588 NSD2O96028 1365 aa26.14■■□□□ 1.78
ABCD4-228ENST00000557588 IP6K1Q92551 441 aa26.13■■□□□ 1.77
ABCD4-228ENST00000557588 GIGYF1O75420 1035 aaPredicted RBP26.12■■□□□ 1.77
ABCD4-228ENST00000557588 KLHL34Q8N239 644 aa26.12■■□□□ 1.77
ABCD4-228ENST00000557588 TMC1Q8TDI8 760 aa26.12■■□□□ 1.77
ABCD4-228ENST00000557588 DDX54Q8TDD1 881 aaKnown RBP26.11■■□□□ 1.77
ABCD4-228ENST00000557588 TFCP2L1Q9NZI6 479 aa26.11■■□□□ 1.77
ABCD4-228ENST00000557588 SLC12A5Q9H2X9 1139 aa26.1■■□□□ 1.77
ABCD4-228ENST00000557588 TERF2IPQ9NYB0 399 aa26.1■■□□□ 1.77
ABCD4-228ENST00000557588 NLGN2Q8NFZ4 835 aa26.09■■□□□ 1.77
ABCD4-228ENST00000557588 MEGF6O75095 1541 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms