RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 PRR20BP86481 221 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 PRR20AP86496 221 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 VAC14Q08AM6 782 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 ERFEQ4G0M1 354 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 PTCRAQ6ISU1 281 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 TRAF7Q6Q0C0 670 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 FNBP4Q8N3X1 1017 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 GLMNQ92990 594 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 POM121Q96HA1 1249 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 PGPEP1Q9NXJ5 209 aa5.39□□□□□ -1.55
HMGB1P14-201ENST00000557424 ADH1CP00326 375 aa5.38□□□□□ -1.55
HMGB1P14-201ENST00000557424 MYCP01106 439 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P14-201ENST00000557424 IRF5Q13568 498 aa5.38□□□□□ -1.55
HMGB1P14-201ENST00000557424 SNIP1Q8TAD8 396 aaKnown RBP5.38□□□□□ -1.55
HMGB1P14-201ENST00000557424 EPS8L1Q8TE68 723 aa5.38□□□□□ -1.55
HMGB1P14-201ENST00000557424 RBM19Q9Y4C8 960 aaKnown RBP5.38□□□□□ -1.55
HMGB1P14-201ENST00000557424 LOC105371045A0A1W2PR82 267 aa5.37□□□□□ -1.55
HMGB1P14-201ENST00000557424 LIAT1Q6ZQX7 453 aa5.37□□□□□ -1.55
HMGB1P14-201ENST00000557424 TRIM50Q86XT4 487 aa5.37□□□□□ -1.55
HMGB1P14-201ENST00000557424 RNF135Q8IUD6 432 aa5.37□□□□□ -1.55
HMGB1P14-201ENST00000557424 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
HMGB1P14-201ENST00000557424 ARID5BQ14865 1188 aa5.36□□□□□ -1.55
HMGB1P14-201ENST00000557424 PLA2G2CQ5R387 149 aa5.36□□□□□ -1.55
HMGB1P14-201ENST00000557424 CDK15Q96Q40 435 aa5.36□□□□□ -1.55
HMGB1P14-201ENST00000557424 KCTD15Q96SI1 283 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P14-201ENST00000557424 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
HMGB1P14-201ENST00000557424 EMILIN1Q9Y6C2 1016 aa5.36□□□□□ -1.55
HMGB1P14-201ENST00000557424 PPP1R15AO75807 674 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 ATP1A2P50993 1020 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 FOXC1Q12948 553 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 USP4Q13107 963 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 EML3Q32P44 896 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 HDGFL1Q5TGJ6 251 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 CCDC116Q8IYX3 515 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 KCTD17Q8N5Z5 321 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 FOXJ1Q92949 421 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 DOLKQ9UPQ8 538 aa5.35□□□□□ -1.55
HMGB1P14-201ENST00000557424 UPP2O95045 317 aa5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 ALDH1A1P00352 501 aa5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 FSHRP23945 695 aa5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 ZNF775Q96BV0 537 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 MRGPRX2Q96LB1 330 aa5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 ALG2Q9H553 416 aa5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 CEP126Q9P2H0 1117 aa5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 ZNF777Q9ULD5 760 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P14-201ENST00000557424 ATP5J2-PTCD1G3V325 749 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 NRG2O14511 850 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 ATP9BO43861 1147 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 GPR37L1O60883 481 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 SKOR1P84550 965 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 CTC1Q2NKJ3 1217 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 PLEKHM2Q8IWE5 1019 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 ZNF428Q96B54 188 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 PDZRN3Q9UPQ7 1066 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 NOD1Q9Y239 953 aa5.33□□□□□ -1.56
HMGB1P14-201ENST00000557424 ACIN1Q9UKV3 1341 aaKnown RBP5.32□□□□□ -1.56
HMGB1P14-201ENST00000557424 ESPNB1AK53 854 aa5.32□□□□□ -1.56
HMGB1P14-201ENST00000557424 SKIP12755 728 aa5.32□□□□□ -1.56
HMGB1P14-201ENST00000557424 MYT1Q01538 1121 aa5.32□□□□□ -1.56
HMGB1P14-201ENST00000557424 PKDCCQ504Y2 493 aa5.32□□□□□ -1.56
HMGB1P14-201ENST00000557424 CYP2U1Q7Z449 544 aa5.32□□□□□ -1.56
HMGB1P14-201ENST00000557424 AEBP1Q8IUX7 1158 aa5.32□□□□□ -1.56
HMGB1P14-201ENST00000557424 DGAT1O75907 488 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 GTF2E1P29083 439 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 NNTQ13423 1086 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 ESCO1Q5FWF5 840 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 PLPP7Q8NBV4 271 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 RGS22Q8NE09 1264 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 PPP1R12CQ9BZL4 782 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 PCDHB11Q9Y5F2 797 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 TLL2Q9Y6L7 1015 aa5.31□□□□□ -1.56
HMGB1P14-201ENST00000557424 POM121CA8CG34 1229 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 USP17L5A8MUK1 530 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 SIAH2O43255 324 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 GDF9O60383 454 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 IGSF3O75054 1194 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 C4orf48Q5BLP8 95 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 CC2D2BQ6DHV5 1058 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 B4GALNT3Q6L9W6 998 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 LARP1Q6PKG0 1096 aaKnown RBP5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 PBXIP1Q96AQ6 731 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 TRAIPQ9BWF2 469 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 MTMR7Q9Y216 660 aa5.3□□□□□ -1.56
HMGB1P14-201ENST00000557424 USP17L3A6NCW0 530 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 USP17L4A6NCW7 530 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 TNFRSF10AO00220 468 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 GFRA3O60609 400 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 FOXD4L5Q5VV16 416 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 ZNF787Q6DD87 383 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 USP17L2Q6R6M4 530 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 USP17L1Q7RTZ2 530 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 FOXD4L4Q8WXT5 416 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 VRTNQ9H8Y1 702 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 TOR4AQ9NXH8 423 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 PKD2L1Q9P0L9 805 aa5.29□□□□□ -1.56
HMGB1P14-201ENST00000557424 PALM3A6NDB9 673 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 FAM187AA6NFU0 413 aa5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 GIGYF1O75420 1035 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P14-201ENST00000557424 RAB15P59190 212 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms