RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
GPHN-214ENST00000556633 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
GPHN-214ENST00000556633 GIGYF1O75420 1035 aaPredicted RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 CD2BP2O95400 341 aaKnown RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 VARSP26640 1264 aaKnown RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 NBPF20Q3BBV1 942 aa6.95□□□□□ -1.3
GPHN-214ENST00000556633 VRTNQ9H8Y1 702 aa6.95□□□□□ -1.3
GPHN-214ENST00000556633 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
GPHN-214ENST00000556633 NCOA4Q13772 614 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 TSGA10IPQ3SY00 556 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 IFFO2Q5TF58 517 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 LIAT1Q6ZQX7 453 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 EHBP1Q8NDI1 1231 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 CHIC2Q9UKJ5 165 aa6.94□□□□□ -1.3
GPHN-214ENST00000556633 ATG7O95352 703 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 MAP7D1Q3KQU3 841 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 KANK4Q5T7N3 995 aaPredicted RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 RC3H1Q5TC82 1133 aaKnown RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 EMID1Q96A84 441 aaPredicted RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
GPHN-214ENST00000556633 DOLKQ9UPQ8 538 aa6.93□□□□□ -1.3
GPHN-214ENST00000556633 ESPNB1AK53 854 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
GPHN-214ENST00000556633 RAB15P59190 212 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 ARID5BQ14865 1188 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 EML3Q32P44 896 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 TRAF7Q6Q0C0 670 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 KCTD15Q96SI1 283 aaPredicted RBP6.92□□□□□ -1.3
GPHN-214ENST00000556633 TRAIPQ9BWF2 469 aa6.92□□□□□ -1.3
GPHN-214ENST00000556633 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
GPHN-214ENST00000556633 SLC19A1P41440 591 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 PDE4CQ08493 712 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 OXLD1Q5BKU9 147 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 VASH1Q7L8A9 365 aaPredicted RBP6.91□□□□□ -1.3
GPHN-214ENST00000556633 SEPT12Q8IYM1 358 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 MAP4K5Q9Y4K4 846 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
GPHN-214ENST00000556633 ATP5J2-PTCD1G3V325 749 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 RASA1P20936 1047 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
GPHN-214ENST00000556633 NOD1Q9Y239 953 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
GPHN-214ENST00000556633 FAM196BA6NMK8 535 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L21D6R901 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
GPHN-214ENST00000556633 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
GPHN-214ENST00000556633 LARP1Q6PKG0 1096 aaKnown RBP6.89□□□□□ -1.31
GPHN-214ENST00000556633 TLL2Q9Y6L7 1015 aa6.89□□□□□ -1.31
GPHN-214ENST00000556633 A0A0G2JS52 829 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 WNT7AO00755 349 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 FSHRP23945 695 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
GPHN-214ENST00000556633 TRIM50Q86XT4 487 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 CCDC125Q86Z20 511 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 OGFOD1Q8N543 542 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 CDK15Q96Q40 435 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 ZMIZ1Q9ULJ6 1067 aa6.88□□□□□ -1.31
GPHN-214ENST00000556633 NOVA2Q9UNW9 492 aaKnown RBP6.88□□□□□ -1.31
GPHN-214ENST00000556633 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 ERVH48-1M5A8F1 160 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 SIAH2O43255 324 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 ATP1A2P50993 1020 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 CLDN10P78369 228 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
GPHN-214ENST00000556633 PTK7Q13308 1070 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 SPRYD7Q5W111 196 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 STK32AQ8WU08 396 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 ZNF594Q96JF6 807 aaPredicted RBP6.87□□□□□ -1.31
GPHN-214ENST00000556633 MRGPRX2Q96LB1 330 aa6.87□□□□□ -1.31
GPHN-214ENST00000556633 GRM5P41594 1212 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 GTF2IP78347 998 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 USP4Q13107 963 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 ZNF697Q5TEC3 545 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 TMEM164Q5U3C3 297 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 MPNDQ8N594 471 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 SIRT1Q96EB6 747 aa6.86□□□□□ -1.31
GPHN-214ENST00000556633 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
GPHN-214ENST00000556633 TMEM88BA6NKF7 163 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 ADH1CP00326 375 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 MYCP01106 439 aaPredicted RBP6.85□□□□□ -1.31
GPHN-214ENST00000556633 AEBP1Q8IUX7 1158 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 ANKMY2Q8IV38 441 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 KCTD17Q8N5Z5 321 aa6.85□□□□□ -1.31
GPHN-214ENST00000556633 ZBTB7CA1YPR0 619 aa6.84□□□□□ -1.31
GPHN-214ENST00000556633 SCTRP47872 440 aa6.84□□□□□ -1.31
GPHN-214ENST00000556633 PSME1Q06323 249 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms