RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
LRP1-211ENST00000556356 RASSF8Q8NHQ8 419 aa18.64■□□□□ 0.57
LRP1-211ENST00000556356 TBC1D2BQ9UPU7 963 aa18.64■□□□□ 0.57
LRP1-211ENST00000556356 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.57
LRP1-211ENST00000556356 MPRIPQ6WCQ1 1025 aa18.64■□□□□ 0.57
LRP1-211ENST00000556356 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
LRP1-211ENST00000556356 ANO2Q9NQ90 1003 aa18.63■□□□□ 0.57
LRP1-211ENST00000556356 MAST1Q9Y2H9 1570 aa18.63■□□□□ 0.57
LRP1-211ENST00000556356 FAM184AQ8NB25 1140 aa18.63■□□□□ 0.57
LRP1-211ENST00000556356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.57
LRP1-211ENST00000556356 LMTK3Q96Q04 1460 aa18.63■□□□□ 0.57
LRP1-211ENST00000556356 IFT57Q9NWB7 429 aa18.63■□□□□ 0.57
LRP1-211ENST00000556356 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
LRP1-211ENST00000556356 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
LRP1-211ENST00000556356 GNL3LQ9NVN8 582 aaKnown RBP18.62■□□□□ 0.57
LRP1-211ENST00000556356 ZNF652Q9Y2D9 606 aa18.62■□□□□ 0.57
LRP1-211ENST00000556356 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
LRP1-211ENST00000556356 EIF2AK4Q9P2K8 1649 aaKnown RBP18.62■□□□□ 0.57
LRP1-211ENST00000556356 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
LRP1-211ENST00000556356 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
LRP1-211ENST00000556356 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
LRP1-211ENST00000556356 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
LRP1-211ENST00000556356 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
LRP1-211ENST00000556356 BCAR3O75815 825 aa18.61■□□□□ 0.57
LRP1-211ENST00000556356 PDE4AP27815 886 aa18.61■□□□□ 0.57
LRP1-211ENST00000556356 CCDC57Q2TAC2 916 aa18.61■□□□□ 0.57
LRP1-211ENST00000556356 H3BQV1 296 aa18.6■□□□□ 0.57
LRP1-211ENST00000556356 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
LRP1-211ENST00000556356 IFFO2Q5TF58 517 aa18.6■□□□□ 0.57
LRP1-211ENST00000556356 MPHOSPH8Q99549 860 aa18.6■□□□□ 0.57
LRP1-211ENST00000556356 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
LRP1-211ENST00000556356 ERICH2A1L162 156 aa18.6■□□□□ 0.57
LRP1-211ENST00000556356 BICDL1Q6ZP65 573 aa18.59■□□□□ 0.57
LRP1-211ENST00000556356 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
LRP1-211ENST00000556356 SYAP1Q96A49 352 aaPredicted RBP18.59■□□□□ 0.57
LRP1-211ENST00000556356 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
LRP1-211ENST00000556356 CCDC158Q5M9N0 1113 aa18.59■□□□□ 0.57
LRP1-211ENST00000556356 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
LRP1-211ENST00000556356 ZPR1O75312 459 aa18.59■□□□□ 0.57
LRP1-211ENST00000556356 C1orf115Q9H7X2 142 aa18.59■□□□□ 0.57
LRP1-211ENST00000556356 LRRC59Q96AG4 307 aaKnown RBP18.58■□□□□ 0.56
LRP1-211ENST00000556356 TRPM2O94759 1503 aa18.58■□□□□ 0.56
LRP1-211ENST00000556356 MYO5CQ9NQX4 1742 aa18.58■□□□□ 0.56
LRP1-211ENST00000556356 FYB1O15117 783 aa18.57■□□□□ 0.56
LRP1-211ENST00000556356 DHX16O60231 1041 aaKnown RBP18.57■□□□□ 0.56
LRP1-211ENST00000556356 SF3A1Q15459 793 aaKnown RBP18.57■□□□□ 0.56
LRP1-211ENST00000556356 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
LRP1-211ENST00000556356 YEATS2Q9ULM3 1422 aa18.57■□□□□ 0.56
LRP1-211ENST00000556356 CPLX1O14810 134 aa18.57■□□□□ 0.56
LRP1-211ENST00000556356 FMNL2Q96PY5 1086 aa18.57■□□□□ 0.56
LRP1-211ENST00000556356 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
LRP1-211ENST00000556356 TTC39AQ5SRH9 613 aa18.57■□□□□ 0.56
LRP1-211ENST00000556356 DNAJC2Q99543 621 aaKnown RBP18.56■□□□□ 0.56
LRP1-211ENST00000556356 RALYLQ86SE5 291 aaKnown RBP18.56■□□□□ 0.56
LRP1-211ENST00000556356 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
LRP1-211ENST00000556356 PZPP20742 1482 aa18.56■□□□□ 0.56
LRP1-211ENST00000556356 CDC45O75419 566 aa18.55■□□□□ 0.56
LRP1-211ENST00000556356 DNTTIP2Q5QJE6 756 aaKnown RBP18.55■□□□□ 0.56
LRP1-211ENST00000556356 LARP1Q6PKG0 1096 aaKnown RBP18.55■□□□□ 0.56
LRP1-211ENST00000556356 C8orf37Q96NL8 207 aa18.55■□□□□ 0.56
LRP1-211ENST00000556356 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
LRP1-211ENST00000556356 TRIM29Q14134 588 aa18.54■□□□□ 0.56
LRP1-211ENST00000556356 SIL1Q9H173 461 aa18.54■□□□□ 0.56
LRP1-211ENST00000556356 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
LRP1-211ENST00000556356 ABCC1P33527 1531 aa18.54■□□□□ 0.56
LRP1-211ENST00000556356 ARHGEF12Q9NZN5 1544 aa18.53■□□□□ 0.56
LRP1-211ENST00000556356 HIP1O00291 1037 aa18.53■□□□□ 0.56
LRP1-211ENST00000556356 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
LRP1-211ENST00000556356 HSP90AB3PQ58FF7 597 aa18.53■□□□□ 0.56
LRP1-211ENST00000556356 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.56
LRP1-211ENST00000556356 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
LRP1-211ENST00000556356 DRC7Q8IY82 874 aa18.52■□□□□ 0.56
LRP1-211ENST00000556356 TMEM2Q9UHN6 1383 aa18.52■□□□□ 0.56
LRP1-211ENST00000556356 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.56
LRP1-211ENST00000556356 ATP6V1DQ9Y5K8 247 aa18.52■□□□□ 0.56
LRP1-211ENST00000556356 ZCRB1Q8TBF4 217 aaKnown RBP18.52■□□□□ 0.56
LRP1-211ENST00000556356 MAGI3Q5TCQ9 1506 aa18.52■□□□□ 0.55
LRP1-211ENST00000556356 CEP126Q9P2H0 1117 aa18.52■□□□□ 0.55
LRP1-211ENST00000556356 SRGAP3O43295 1099 aa18.51■□□□□ 0.55
LRP1-211ENST00000556356 LRRCC1Q9C099 1032 aa18.51■□□□□ 0.55
LRP1-211ENST00000556356 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
LRP1-211ENST00000556356 NPATQ14207 1427 aa18.51■□□□□ 0.55
LRP1-211ENST00000556356 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
LRP1-211ENST00000556356 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.51■□□□□ 0.55
LRP1-211ENST00000556356 TPM4P67936 248 aa18.5■□□□□ 0.55
LRP1-211ENST00000556356 HYPKQ9NX55 129 aa18.5■□□□□ 0.55
LRP1-211ENST00000556356 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
LRP1-211ENST00000556356 ALDH1L2Q3SY69 923 aa18.49■□□□□ 0.55
LRP1-211ENST00000556356 CWC22Q9HCG8 908 aaKnown RBP18.49■□□□□ 0.55
LRP1-211ENST00000556356 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
LRP1-211ENST00000556356 FOXD4L5Q5VV16 416 aaPredicted RBP18.49■□□□□ 0.55
LRP1-211ENST00000556356 FOXD4L4Q8WXT5 416 aaPredicted RBP18.49■□□□□ 0.55
LRP1-211ENST00000556356 FBLN1P23142 703 aa18.49■□□□□ 0.55
LRP1-211ENST00000556356 MCTP1Q6DN14 999 aa18.49■□□□□ 0.55
LRP1-211ENST00000556356 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
LRP1-211ENST00000556356 TCEAL9Q9UHQ7 104 aa18.48■□□□□ 0.55
LRP1-211ENST00000556356 SLC3A2P08195 630 aaKnown RBP18.48■□□□□ 0.55
LRP1-211ENST00000556356 AK7Q96M32 723 aa18.48■□□□□ 0.55
LRP1-211ENST00000556356 MYD88Q99836 296 aa18.48■□□□□ 0.55
LRP1-211ENST00000556356 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms