RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 TRIM35Q9UPQ4 493 aa24.4■■□□□ 1.5
SDR39U1-218ENST00000556262 XIRP1Q702N8 1843 aaKnown RBP24.4■■□□□ 1.5
SDR39U1-218ENST00000556262 SBNO1A3KN83 1393 aa24.39■■□□□ 1.5
SDR39U1-218ENST00000556262 DCCP43146 1447 aa24.39■■□□□ 1.5
SDR39U1-218ENST00000556262 AMPHP49418 695 aa24.39■■□□□ 1.49
SDR39U1-218ENST00000556262 RIPK4P57078 832 aa24.39■■□□□ 1.49
SDR39U1-218ENST00000556262 FLT4P35916 1363 aa24.39■■□□□ 1.49
SDR39U1-218ENST00000556262 KRT28Q7Z3Y7 464 aa24.37■■□□□ 1.49
SDR39U1-218ENST00000556262 CADPS2Q86UW7 1296 aa24.37■■□□□ 1.49
SDR39U1-218ENST00000556262 AEBP1Q8IUX7 1158 aa24.37■■□□□ 1.49
SDR39U1-218ENST00000556262 MSH6P52701 1360 aa24.37■■□□□ 1.49
SDR39U1-218ENST00000556262 NEFMP07197 916 aa24.36■■□□□ 1.49
SDR39U1-218ENST00000556262 KIF1AQ12756 1690 aa24.36■■□□□ 1.49
SDR39U1-218ENST00000556262 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
SDR39U1-218ENST00000556262 DDX17Q92841 729 aaKnown RBP24.36■■□□□ 1.49
SDR39U1-218ENST00000556262 PLIN1O60240 522 aa24.35■■□□□ 1.49
SDR39U1-218ENST00000556262 PLEKHG5O94827 1062 aa24.35■■□□□ 1.49
SDR39U1-218ENST00000556262 LMOD2Q6P5Q4 547 aa24.35■■□□□ 1.49
SDR39U1-218ENST00000556262 TRPM3Q9HCF6 1732 aaPredicted RBP24.34■■□□□ 1.49
SDR39U1-218ENST00000556262 HOXC9P31274 260 aa24.33■■□□□ 1.49
SDR39U1-218ENST00000556262 RGPD1P0DJD0 1748 aa24.33■■□□□ 1.48
SDR39U1-218ENST00000556262 NFE2L2Q16236 605 aa24.33■■□□□ 1.48
SDR39U1-218ENST00000556262 PPP4R2Q9NY27 417 aa24.31■■□□□ 1.48
SDR39U1-218ENST00000556262 NFAT5O94916 1531 aa24.31■■□□□ 1.48
SDR39U1-218ENST00000556262 LTN1O94822 1766 aa24.3■■□□□ 1.48
SDR39U1-218ENST00000556262 KIF24Q5T7B8 1368 aa24.28■■□□□ 1.48
SDR39U1-218ENST00000556262 TSR2Q969E8 191 aaKnown RBP24.28■■□□□ 1.48
SDR39U1-218ENST00000556262 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
SDR39U1-218ENST00000556262 ZBTB7CA1YPR0 619 aa24.27■■□□□ 1.48
SDR39U1-218ENST00000556262 KCNH5Q8NCM2 988 aa24.27■■□□□ 1.48
SDR39U1-218ENST00000556262 EYA1Q99502 592 aa24.27■■□□□ 1.48
SDR39U1-218ENST00000556262 DLG5Q8TDM6 1919 aa24.27■■□□□ 1.48
SDR39U1-218ENST00000556262 ARHGEF10O15013 1369 aa24.27■■□□□ 1.48
SDR39U1-218ENST00000556262 LTV1Q96GA3 475 aaPredicted RBP24.27■■□□□ 1.48
SDR39U1-218ENST00000556262 GCP02774 474 aa24.26■■□□□ 1.47
SDR39U1-218ENST00000556262 BCAR3O75815 825 aa24.25■■□□□ 1.47
SDR39U1-218ENST00000556262 THUMPD2Q9BTF0 503 aaKnown RBP24.25■■□□□ 1.47
SDR39U1-218ENST00000556262 B4GALNT3Q6L9W6 998 aa24.25■■□□□ 1.47
SDR39U1-218ENST00000556262 FANCIQ9NVI1 1328 aa24.25■■□□□ 1.47
SDR39U1-218ENST00000556262 IGSF1Q8N6C5 1336 aa24.24■■□□□ 1.47
SDR39U1-218ENST00000556262 ALS2Q96Q42 1657 aa24.24■■□□□ 1.47
SDR39U1-218ENST00000556262 EXOC6Q8TAG9 804 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 IP6K1Q92551 441 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 IL16Q14005 1332 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 NPHP3Q7Z494 1330 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 RTL1A6NKG5 1358 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 SLIT3O75094 1523 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 C20orf194Q5TEA3 1177 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 USP19O94966 1318 aa24.23■■□□□ 1.47
SDR39U1-218ENST00000556262 BRINP3Q76B58 766 aa24.22■■□□□ 1.47
SDR39U1-218ENST00000556262 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
SDR39U1-218ENST00000556262 SLAIN2Q9P270 581 aa24.21■■□□□ 1.47
SDR39U1-218ENST00000556262 KDRP35968 1356 aa24.21■■□□□ 1.47
SDR39U1-218ENST00000556262 ARHGEF25Q86VW2 580 aa24.2■■□□□ 1.46
SDR39U1-218ENST00000556262 LAS1LQ9Y4W2 734 aaKnown RBP24.2■■□□□ 1.46
SDR39U1-218ENST00000556262 DCTN1Q14203 1278 aa24.19■■□□□ 1.46
SDR39U1-218ENST00000556262 EXOSC9Q06265 439 aaKnown RBP24.18■■□□□ 1.46
SDR39U1-218ENST00000556262 PXDNQ92626 1479 aa24.18■■□□□ 1.46
SDR39U1-218ENST00000556262 RARSP54136 660 aaKnown RBP24.18■■□□□ 1.46
SDR39U1-218ENST00000556262 MED1Q15648 1581 aaPredicted RBP24.18■■□□□ 1.46
SDR39U1-218ENST00000556262 USHBP1Q8N6Y0 703 aa24.17■■□□□ 1.46
SDR39U1-218ENST00000556262 CRBNQ96SW2 442 aa24.17■■□□□ 1.46
SDR39U1-218ENST00000556262 PHRF1Q9P1Y6 1649 aaKnown RBP24.17■■□□□ 1.46
SDR39U1-218ENST00000556262 LMOD3Q0VAK6 560 aa24.16■■□□□ 1.46
SDR39U1-218ENST00000556262 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.16■■□□□ 1.46
SDR39U1-218ENST00000556262 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-218ENST00000556262 MTHFSDQ2M296 383 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-218ENST00000556262 TNS3Q68CZ2 1445 aa24.15■■□□□ 1.46
SDR39U1-218ENST00000556262 CABLES1Q8TDN4 633 aa24.14■■□□□ 1.46
SDR39U1-218ENST00000556262 BCL2L13Q9BXK5 485 aa24.14■■□□□ 1.46
SDR39U1-218ENST00000556262 SPATA31A3Q5VYP0 1347 aa24.13■■□□□ 1.45
SDR39U1-218ENST00000556262 CALD1Q05682 793 aaKnown RBP24.13■■□□□ 1.45
SDR39U1-218ENST00000556262 NBPF6Q5VWK0 638 aa24.13■■□□□ 1.45
SDR39U1-218ENST00000556262 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
SDR39U1-218ENST00000556262 NBPF4Q96M43 638 aa24.13■■□□□ 1.45
SDR39U1-218ENST00000556262 CCDC136Q96JN2 1154 aa24.12■■□□□ 1.45
SDR39U1-218ENST00000556262 AXIN2Q9Y2T1 843 aa24.12■■□□□ 1.45
SDR39U1-218ENST00000556262 RBM19Q9Y4C8 960 aaKnown RBP24.12■■□□□ 1.45
SDR39U1-218ENST00000556262 RGPD2P0DJD1 1756 aa24.12■■□□□ 1.45
SDR39U1-218ENST00000556262 MCM10Q7L590 875 aa24.12■■□□□ 1.45
SDR39U1-218ENST00000556262 LRRC59Q96AG4 307 aaKnown RBP24.12■■□□□ 1.45
SDR39U1-218ENST00000556262 IFT57Q9NWB7 429 aa24.11■■□□□ 1.45
SDR39U1-218ENST00000556262 ZNF853P0CG23 659 aa24.11■■□□□ 1.45
SDR39U1-218ENST00000556262 GNAI1P63096 354 aa24.11■■□□□ 1.45
SDR39U1-218ENST00000556262 FRAT1Q92837 279 aaPredicted RBP24.1■■□□□ 1.45
SDR39U1-218ENST00000556262 MBIPQ9NS73 344 aa24.09■■□□□ 1.45
SDR39U1-218ENST00000556262 CT47B1P0C2W7 299 aaPredicted RBP24.09■■□□□ 1.45
SDR39U1-218ENST00000556262 CFAP44Q96MT7 982 aa24.09■■□□□ 1.45
SDR39U1-218ENST00000556262 RGPD5Q99666 1765 aa24.09■■□□□ 1.45
SDR39U1-218ENST00000556262 CANXP27824 592 aaKnown RBP24.08■■□□□ 1.45
SDR39U1-218ENST00000556262 ANKRD24Q8TF21 1146 aa24.08■■□□□ 1.45
SDR39U1-218ENST00000556262 GAS2L2Q8NHY3 880 aa24.07■■□□□ 1.44
SDR39U1-218ENST00000556262 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
SDR39U1-218ENST00000556262 SSH1Q8WYL5 1049 aa24.05■■□□□ 1.44
SDR39U1-218ENST00000556262 ANP32EQ9BTT0 268 aa24.05■■□□□ 1.44
SDR39U1-218ENST00000556262 CRYBG1Q9Y4K1 1723 aa24.04■■□□□ 1.44
SDR39U1-218ENST00000556262 TSPYL6Q8N831 410 aa24.03■■□□□ 1.44
SDR39U1-218ENST00000556262 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
SDR39U1-218ENST00000556262 SMC4Q9NTJ3 1288 aa24.03■■□□□ 1.44
SDR39U1-218ENST00000556262 PANK1Q8TE04 598 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms