RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 AKAP2Q9Y2D5 859 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
LINC00641-201ENST00000555379 CDC45O75419 566 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.1□□□□□ -0.79
LINC00641-201ENST00000555379 NFXL1Q6ZNB6 911 aa10.1□□□□□ -0.79
LINC00641-201ENST00000555379 RPRD2Q5VT52 1461 aaKnown RBP10.1□□□□□ -0.79
LINC00641-201ENST00000555379 EIF4G3O43432 1585 aaKnown RBP10.1□□□□□ -0.79
LINC00641-201ENST00000555379 TRAF1Q13077 416 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 HDGFL1Q5TGJ6 251 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 GPATCH8Q9UKJ3 1502 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 GNAT3A8MTJ3 354 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 PRKAR2BP31323 418 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 NOC3LQ8WTT2 800 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 PPIP5K1Q6PFW1 1433 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 IGHMBP2P38935 993 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 TMEM132EQ6IEE7 984 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 CCAR1Q8IX12 1150 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
LINC00641-201ENST00000555379 TXLNBQ8N3L3 684 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
LINC00641-201ENST00000555379 ANO2Q9NQ90 1003 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 GOLGA6L19H0YKK7 550 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TXLNAP40222 546 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 GPS2Q13227 327 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TWISTNBQ3B726 338 aaPredicted RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 BRD2P25440 801 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 KRT32Q14532 448 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 NFE2L2Q16236 605 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 ATP10BO94823 1461 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CDKL5O76039 1030 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CNNM1Q9NRU3 951 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 UHRF1BP1Q6BDS2 1440 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 ATP10AO60312 1499 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
LINC00641-201ENST00000555379 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 MPHOSPH8Q99549 860 aa10.08□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC57Q2TAC2 916 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 NKTRP30414 1462 aaKnown RBP10.07□□□□□ -0.8
LINC00641-201ENST00000555379 RPAP2Q8IXW5 612 aaPredicted RBP10.07□□□□□ -0.8
LINC00641-201ENST00000555379 FBXW7Q969H0 707 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 RRP7AQ9Y3A4 280 aaKnown RBP10.07□□□□□ -0.8
LINC00641-201ENST00000555379 RAB11FIP3O75154 756 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 ALDH1L2Q3SY69 923 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 TCP11L2Q8N4U5 519 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 FAM13BQ9NYF5 915 aa10.07□□□□□ -0.8
LINC00641-201ENST00000555379 ATF7IPQ6VMQ6 1270 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 WASF1Q92558 559 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 MAGI2Q86UL8 1455 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 RALGAPBQ86X10 1494 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 TRIM21P19474 475 aaKnown RBP10.06□□□□□ -0.8
LINC00641-201ENST00000555379 IRX3P78415 501 aaPredicted RBP10.06□□□□□ -0.8
LINC00641-201ENST00000555379 ZPR1O75312 459 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
LINC00641-201ENST00000555379 EXOC5O00471 708 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NAT10Q9H0A0 1025 aaKnown RBP10.05□□□□□ -0.8
LINC00641-201ENST00000555379 IL16Q14005 1332 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 BBXQ8WY36 941 aaPredicted RBP10.05□□□□□ -0.8
LINC00641-201ENST00000555379 PBRM1Q86U86 1689 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 HYPKQ9NX55 129 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NSD3Q9BZ95 1437 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 BECN2A8MW95 431 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 SULT6B1Q6IMI4 303 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC73Q6ZRK6 1079 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 RIMS2Q9UQ26 1411 aa10.05□□□□□ -0.8
LINC00641-201ENST00000555379 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 CEP126Q9P2H0 1117 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 SMC3Q9UQE7 1217 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 FSD1Q9BTV5 496 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 EHMT1Q9H9B1 1298 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 BTBD11A6QL63 1104 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 HMOX1P09601 288 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC178Q5BJE1 867 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 AXDND1Q5T1B0 1012 aaPredicted RBP10.04□□□□□ -0.8
LINC00641-201ENST00000555379 DHX37Q8IY37 1157 aaKnown RBP10.04□□□□□ -0.8
LINC00641-201ENST00000555379 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 ZNF396Q96N95 335 aaPredicted RBP10.04□□□□□ -0.8
LINC00641-201ENST00000555379 ARHGEF12Q9NZN5 1544 aa10.04□□□□□ -0.8
LINC00641-201ENST00000555379 LDHCP07864 332 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 CCDC27Q2M243 656 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 ZFYVE9O95405 1425 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 IFIT1P09914 478 aaKnown RBP10.03□□□□□ -0.8
LINC00641-201ENST00000555379 MPHOSPH6Q99547 160 aaKnown RBP10.03□□□□□ -0.8
LINC00641-201ENST00000555379 FMNL2Q96PY5 1086 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 ABCA5Q8WWZ7 1642 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms