RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 USP35Q9P2H5 1018 aa12.78□□□□□ -0.36
AC004828.1-201ENST00000555303 LTN1O94822 1766 aa12.78□□□□□ -0.36
AC004828.1-201ENST00000555303 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
AC004828.1-201ENST00000555303 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
AC004828.1-201ENST00000555303 SBF2Q86WG5 1849 aa12.77□□□□□ -0.37
AC004828.1-201ENST00000555303 WDR17Q8IZU2 1322 aa12.77□□□□□ -0.37
AC004828.1-201ENST00000555303 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
AC004828.1-201ENST00000555303 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
AC004828.1-201ENST00000555303 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.37
AC004828.1-201ENST00000555303 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.37
AC004828.1-201ENST00000555303 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
AC004828.1-201ENST00000555303 FAM182BQ5T319 152 aa12.76□□□□□ -0.37
AC004828.1-201ENST00000555303 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
AC004828.1-201ENST00000555303 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
AC004828.1-201ENST00000555303 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
AC004828.1-201ENST00000555303 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
AC004828.1-201ENST00000555303 ZBTB7CA1YPR0 619 aa12.74□□□□□ -0.37
AC004828.1-201ENST00000555303 TRIM37O94972 964 aa12.74□□□□□ -0.37
AC004828.1-201ENST00000555303 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
AC004828.1-201ENST00000555303 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
AC004828.1-201ENST00000555303 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
AC004828.1-201ENST00000555303 BCL9O00512 1426 aa12.73□□□□□ -0.37
AC004828.1-201ENST00000555303 CCDC7Q96M83 1385 aa12.73□□□□□ -0.37
AC004828.1-201ENST00000555303 TOM1L2Q6ZVM7 507 aa12.73□□□□□ -0.37
AC004828.1-201ENST00000555303 A0A1W2PP64 1363 aa12.72□□□□□ -0.37
AC004828.1-201ENST00000555303 DDB1Q16531 1140 aa12.72□□□□□ -0.37
AC004828.1-201ENST00000555303 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
AC004828.1-201ENST00000555303 APBA3O96018 575 aa12.71□□□□□ -0.37
AC004828.1-201ENST00000555303 TMC1Q8TDI8 760 aa12.71□□□□□ -0.37
AC004828.1-201ENST00000555303 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.37
AC004828.1-201ENST00000555303 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
AC004828.1-201ENST00000555303 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
AC004828.1-201ENST00000555303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.7□□□□□ -0.38
AC004828.1-201ENST00000555303 TESK2Q96S53 571 aa12.7□□□□□ -0.38
AC004828.1-201ENST00000555303 TNS2Q63HR2 1409 aa12.7□□□□□ -0.38
AC004828.1-201ENST00000555303 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
AC004828.1-201ENST00000555303 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
AC004828.1-201ENST00000555303 ERBB3P21860 1342 aa12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 ST20-MTHFSA0A0A6YYL1 179 aa12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 SOX12O15370 315 aa12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 NME9Q86XW9 330 aa12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 USP47Q96K76 1375 aa12.68□□□□□ -0.38
AC004828.1-201ENST00000555303 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
AC004828.1-201ENST00000555303 ANKRD36BQ8N2N9 1353 aa12.67□□□□□ -0.38
AC004828.1-201ENST00000555303 KIF20BQ96Q89 1820 aa12.67□□□□□ -0.38
AC004828.1-201ENST00000555303 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
AC004828.1-201ENST00000555303 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
AC004828.1-201ENST00000555303 PLSCR1O15162 318 aa12.65□□□□□ -0.38
AC004828.1-201ENST00000555303 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
AC004828.1-201ENST00000555303 MYOM1P52179 1685 aa12.64□□□□□ -0.39
AC004828.1-201ENST00000555303 EXOC5O00471 708 aa12.64□□□□□ -0.39
AC004828.1-201ENST00000555303 TMF1P82094 1093 aa12.64□□□□□ -0.39
AC004828.1-201ENST00000555303 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
AC004828.1-201ENST00000555303 MARCH10Q8NA82 808 aaPredicted RBP12.64□□□□□ -0.39
AC004828.1-201ENST00000555303 COG3Q96JB2 828 aa12.63□□□□□ -0.39
AC004828.1-201ENST00000555303 RTL1A6NKG5 1358 aa12.63□□□□□ -0.39
AC004828.1-201ENST00000555303 CASZ1Q86V15 1759 aa12.62□□□□□ -0.39
AC004828.1-201ENST00000555303 IL2RBP14784 551 aa12.62□□□□□ -0.39
AC004828.1-201ENST00000555303 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
AC004828.1-201ENST00000555303 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
AC004828.1-201ENST00000555303 BTAF1O14981 1849 aa12.61□□□□□ -0.39
AC004828.1-201ENST00000555303 IP6K1Q92551 441 aa12.61□□□□□ -0.39
AC004828.1-201ENST00000555303 RGPD2P0DJD1 1756 aa12.59□□□□□ -0.39
AC004828.1-201ENST00000555303 ANKRD26Q9UPS8 1709 aa12.59□□□□□ -0.39
AC004828.1-201ENST00000555303 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
AC004828.1-201ENST00000555303 SMG6Q86US8 1419 aaKnown RBP12.58□□□□□ -0.4
AC004828.1-201ENST00000555303 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
AC004828.1-201ENST00000555303 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
AC004828.1-201ENST00000555303 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.4
AC004828.1-201ENST00000555303 HOXC9P31274 260 aa12.57□□□□□ -0.4
AC004828.1-201ENST00000555303 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
AC004828.1-201ENST00000555303 AMPHP49418 695 aa12.56□□□□□ -0.4
AC004828.1-201ENST00000555303 QSER1Q2KHR3 1735 aa12.56□□□□□ -0.4
AC004828.1-201ENST00000555303 FYB1O15117 783 aa12.55□□□□□ -0.4
AC004828.1-201ENST00000555303 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
AC004828.1-201ENST00000555303 SPON1Q9HCB6 807 aa12.55□□□□□ -0.4
AC004828.1-201ENST00000555303 KAT6BQ8WYB5 2073 aa12.55□□□□□ -0.4
AC004828.1-201ENST00000555303 KCNQ2O43526 872 aa12.54□□□□□ -0.4
AC004828.1-201ENST00000555303 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
AC004828.1-201ENST00000555303 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
AC004828.1-201ENST00000555303 CGNL1Q0VF96 1302 aa12.54□□□□□ -0.4
AC004828.1-201ENST00000555303 FLT4P35916 1363 aa12.54□□□□□ -0.4
AC004828.1-201ENST00000555303 LY75O60449 1722 aa12.54□□□□□ -0.4
AC004828.1-201ENST00000555303 PROM2Q8N271 834 aa12.53□□□□□ -0.4
AC004828.1-201ENST00000555303 GGNBP2Q9H3C7 697 aa12.53□□□□□ -0.4
AC004828.1-201ENST00000555303 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
AC004828.1-201ENST00000555303 INSRP06213 1382 aa12.53□□□□□ -0.4
AC004828.1-201ENST00000555303 NSD3Q9BZ95 1437 aa12.53□□□□□ -0.4
AC004828.1-201ENST00000555303 MEGF6O75095 1541 aa12.52□□□□□ -0.4
AC004828.1-201ENST00000555303 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
AC004828.1-201ENST00000555303 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
AC004828.1-201ENST00000555303 SLC15A2Q16348 729 aa12.51□□□□□ -0.41
AC004828.1-201ENST00000555303 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
AC004828.1-201ENST00000555303 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
AC004828.1-201ENST00000555303 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
AC004828.1-201ENST00000555303 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
AC004828.1-201ENST00000555303 RRS1Q15050 365 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms