RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PROSER2Q86WR7 435 aaPredicted RBP8.31□□□□□ -1.08
SCFD1-214ENST00000554819 SOX11P35716 441 aa8.3□□□□□ -1.08
SCFD1-214ENST00000554819 KCTD15Q96SI1 283 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-214ENST00000554819 GRM5P41594 1212 aa8.29□□□□□ -1.08
SCFD1-214ENST00000554819 ZMYND15Q9H091 742 aa8.29□□□□□ -1.08
SCFD1-214ENST00000554819 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
SCFD1-214ENST00000554819 NNTQ13423 1086 aa8.28□□□□□ -1.08
SCFD1-214ENST00000554819 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
SCFD1-214ENST00000554819 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-214ENST00000554819 TRIM52Q96A61 297 aa8.28□□□□□ -1.08
SCFD1-214ENST00000554819 FSHRP23945 695 aa8.27□□□□□ -1.09
SCFD1-214ENST00000554819 DHX9Q08211 1270 aaKnown RBP8.27□□□□□ -1.09
SCFD1-214ENST00000554819 RNF20Q5VTR2 975 aa8.27□□□□□ -1.09
SCFD1-214ENST00000554819 SEPT12Q8IYM1 358 aa8.27□□□□□ -1.09
SCFD1-214ENST00000554819 AVPP01185 164 aa8.26□□□□□ -1.09
SCFD1-214ENST00000554819 Q6ZNB5 142 aa8.26□□□□□ -1.09
SCFD1-214ENST00000554819 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
SCFD1-214ENST00000554819 ESPNB1AK53 854 aa8.25□□□□□ -1.09
SCFD1-214ENST00000554819 CTC1Q2NKJ3 1217 aa8.25□□□□□ -1.09
SCFD1-214ENST00000554819 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
SCFD1-214ENST00000554819 HPS1Q92902 700 aa8.25□□□□□ -1.09
SCFD1-214ENST00000554819 CEP126Q9P2H0 1117 aa8.25□□□□□ -1.09
SCFD1-214ENST00000554819 TRAK2O60296 914 aa8.24□□□□□ -1.09
SCFD1-214ENST00000554819 GIGYF1O75420 1035 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-214ENST00000554819 EMILIN1Q9Y6C2 1016 aa8.24□□□□□ -1.09
SCFD1-214ENST00000554819 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
SCFD1-214ENST00000554819 ALG2Q9H553 416 aa8.23□□□□□ -1.09
SCFD1-214ENST00000554819 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
SCFD1-214ENST00000554819 NR3C2P08235 984 aa8.22□□□□□ -1.09
SCFD1-214ENST00000554819 SMCPP49901 116 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-214ENST00000554819 SLFNL1Q499Z3 407 aa8.22□□□□□ -1.09
SCFD1-214ENST00000554819 POM121CA8CG34 1229 aa8.21□□□□□ -1.1
SCFD1-214ENST00000554819 WDR4P57081 412 aaKnown RBP8.21□□□□□ -1.1
SCFD1-214ENST00000554819 RAB15P59190 212 aa8.21□□□□□ -1.1
SCFD1-214ENST00000554819 MYT1Q01538 1121 aa8.21□□□□□ -1.1
SCFD1-214ENST00000554819 PPP1R26Q5T8A7 1209 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-214ENST00000554819 HDGFL1Q5TGJ6 251 aa8.21□□□□□ -1.1
SCFD1-214ENST00000554819 CRIPAKQ8N1N5 446 aa8.21□□□□□ -1.1
SCFD1-214ENST00000554819 AXIN1O15169 862 aa8.2□□□□□ -1.1
SCFD1-214ENST00000554819 CAPN5O15484 640 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-214ENST00000554819 ZIC2O95409 532 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-214ENST00000554819 TRAF7Q6Q0C0 670 aa8.2□□□□□ -1.1
SCFD1-214ENST00000554819 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-214ENST00000554819 ERVH48-1M5A8F1 160 aa8.19□□□□□ -1.1
SCFD1-214ENST00000554819 TIMP2P16035 220 aa8.18□□□□□ -1.1
SCFD1-214ENST00000554819 RNF135Q8IUD6 432 aa8.18□□□□□ -1.1
SCFD1-214ENST00000554819 PHTF2Q8N3S3 785 aa8.18□□□□□ -1.1
SCFD1-214ENST00000554819 ITPKCQ96DU7 683 aa8.18□□□□□ -1.1
SCFD1-214ENST00000554819 CALR3Q96L12 384 aaKnown RBP8.18□□□□□ -1.1
SCFD1-214ENST00000554819 ZNF777Q9ULD5 760 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-214ENST00000554819 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
SCFD1-214ENST00000554819 GLMNQ92990 594 aa8.17□□□□□ -1.1
SCFD1-214ENST00000554819 ESF1Q9H501 851 aaKnown RBP8.17□□□□□ -1.1
SCFD1-214ENST00000554819 AAASQ9NRG9 546 aa8.17□□□□□ -1.1
SCFD1-214ENST00000554819 NFATC2IPQ8NCF5 419 aa8.16□□□□□ -1.1
SCFD1-214ENST00000554819 ADAMTS19Q8TE59 1207 aa8.16□□□□□ -1.1
SCFD1-214ENST00000554819 ZFAND3Q9H8U3 227 aa8.16□□□□□ -1.1
SCFD1-214ENST00000554819 TMPRSS4Q9NRS4 437 aa8.16□□□□□ -1.1
SCFD1-214ENST00000554819 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
SCFD1-214ENST00000554819 ZNF784Q8NCA9 323 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-214ENST00000554819 CHIC2Q9UKJ5 165 aa8.15□□□□□ -1.1
SCFD1-214ENST00000554819 DOLKQ9UPQ8 538 aa8.15□□□□□ -1.1
SCFD1-214ENST00000554819 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
SCFD1-214ENST00000554819 LZTS3O60299 673 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-214ENST00000554819 UPP2O95045 317 aa8.14□□□□□ -1.11
SCFD1-214ENST00000554819 USP4Q13107 963 aa8.14□□□□□ -1.11
SCFD1-214ENST00000554819 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
SCFD1-214ENST00000554819 Q6ZVU0 165 aa8.14□□□□□ -1.11
SCFD1-214ENST00000554819 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
SCFD1-214ENST00000554819 CCDC85AQ96PX6 553 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-214ENST00000554819 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-214ENST00000554819 SKIP12755 728 aa8.13□□□□□ -1.11
SCFD1-214ENST00000554819 ERVK-9P63128 1117 aa8.13□□□□□ -1.11
SCFD1-214ENST00000554819 PLPP7Q8NBV4 271 aa8.13□□□□□ -1.11
SCFD1-214ENST00000554819 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
SCFD1-214ENST00000554819 LILRA1O75019 489 aa8.12□□□□□ -1.11
SCFD1-214ENST00000554819 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
SCFD1-214ENST00000554819 PIK3CDO00329 1044 aa8.11□□□□□ -1.11
SCFD1-214ENST00000554819 CBLBQ13191 982 aa8.11□□□□□ -1.11
SCFD1-214ENST00000554819 SCARF1Q14162 830 aa8.11□□□□□ -1.11
SCFD1-214ENST00000554819 TSGA10IPQ3SY00 556 aa8.11□□□□□ -1.11
SCFD1-214ENST00000554819 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
SCFD1-214ENST00000554819 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
SCFD1-214ENST00000554819 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
SCFD1-214ENST00000554819 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
SCFD1-214ENST00000554819 ATP9BO43861 1147 aa8.1□□□□□ -1.11
SCFD1-214ENST00000554819 EML3Q32P44 896 aa8.1□□□□□ -1.11
SCFD1-214ENST00000554819 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
SCFD1-214ENST00000554819 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
SCFD1-214ENST00000554819 LCE2BO14633 110 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 ADH1AP07327 375 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
SCFD1-214ENST00000554819 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 CYP2U1Q7Z449 544 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 UCN2Q96RP3 112 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 DACH1Q9UI36 760 aa8.09□□□□□ -1.11
SCFD1-214ENST00000554819 USP17L5A8MUK1 530 aa8.08□□□□□ -1.12
SCFD1-214ENST00000554819 ATP5J2-PTCD1G3V325 749 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms