RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GOLGB1Q14789 3259 aaKnown RBP15.34■□□□□ 0.05
SRP54-205ENST00000554803 PROM2Q8N271 834 aa15.33■□□□□ 0.04
SRP54-205ENST00000554803 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.04
SRP54-205ENST00000554803 MTFR1LQ9H019 292 aa15.32■□□□□ 0.04
SRP54-205ENST00000554803 CPDO75976 1380 aa15.32■□□□□ 0.04
SRP54-205ENST00000554803 ADGRB1O14514 1584 aa15.32■□□□□ 0.04
SRP54-205ENST00000554803 STK32BQ9NY57 414 aa15.31■□□□□ 0.04
SRP54-205ENST00000554803 COL5A2P05997 1499 aaPredicted RBP15.31■□□□□ 0.04
SRP54-205ENST00000554803 TOPAZ1Q8N9V7 1692 aa15.31■□□□□ 0.04
SRP54-205ENST00000554803 WASLO00401 505 aaPredicted RBP15.3■□□□□ 0.04
SRP54-205ENST00000554803 SLC15A2Q16348 729 aa15.3■□□□□ 0.04
SRP54-205ENST00000554803 PTF1AQ7RTS3 328 aa15.3■□□□□ 0.04
SRP54-205ENST00000554803 MINK1Q8N4C8 1332 aaPredicted RBP15.3■□□□□ 0.04
SRP54-205ENST00000554803 CRB1P82279 1406 aa15.29■□□□□ 0.04
SRP54-205ENST00000554803 COL24A1Q17RW2 1714 aa15.29■□□□□ 0.04
SRP54-205ENST00000554803 BCL9O00512 1426 aa15.28■□□□□ 0.04
SRP54-205ENST00000554803 NEFLP07196 543 aa15.28■□□□□ 0.04
SRP54-205ENST00000554803 NUTM2GQ5VZR2 741 aa15.28■□□□□ 0.04
SRP54-205ENST00000554803 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
SRP54-205ENST00000554803 ARXQ96QS3 562 aa15.28■□□□□ 0.04
SRP54-205ENST00000554803 ARHGEF28Q8N1W1 1705 aaKnown RBP15.27■□□□□ 0.04
SRP54-205ENST00000554803 PAPPAQ13219 1627 aa15.27■□□□□ 0.03
SRP54-205ENST00000554803 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
SRP54-205ENST00000554803 DDB1Q16531 1140 aa15.26■□□□□ 0.03
SRP54-205ENST00000554803 GPR162Q16538 588 aa15.26■□□□□ 0.03
SRP54-205ENST00000554803 TXNRD1Q16881 649 aa15.26■□□□□ 0.03
SRP54-205ENST00000554803 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
SRP54-205ENST00000554803 QSER1Q2KHR3 1735 aa15.26■□□□□ 0.03
SRP54-205ENST00000554803 USP19O94966 1318 aa15.25■□□□□ 0.03
SRP54-205ENST00000554803 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
SRP54-205ENST00000554803 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
SRP54-205ENST00000554803 COL18A1P39060 1754 aa15.24■□□□□ 0.03
SRP54-205ENST00000554803 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
SRP54-205ENST00000554803 KAT6BQ8WYB5 2073 aa15.24■□□□□ 0.03
SRP54-205ENST00000554803 NHSQ6T4R5 1651 aa15.23■□□□□ 0.03
SRP54-205ENST00000554803 NUDT16Q96DE0 195 aaKnown RBP15.23■□□□□ 0.03
SRP54-205ENST00000554803 RGPD5Q99666 1765 aa15.22■□□□□ 0.03
SRP54-205ENST00000554803 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
SRP54-205ENST00000554803 TRPM1Q7Z4N2 1603 aa15.21■□□□□ 0.03
SRP54-205ENST00000554803 GCP02774 474 aa15.2■□□□□ 0.02
SRP54-205ENST00000554803 ABTB2Q8N961 1025 aa15.2■□□□□ 0.02
SRP54-205ENST00000554803 DCAF11Q8TEB1 546 aa15.2■□□□□ 0.02
SRP54-205ENST00000554803 STAC3Q96MF2 364 aa15.2■□□□□ 0.02
SRP54-205ENST00000554803 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
SRP54-205ENST00000554803 BTAF1O14981 1849 aa15.2■□□□□ 0.02
SRP54-205ENST00000554803 TUBGCP6Q96RT7 1819 aa15.2■□□□□ 0.02
SRP54-205ENST00000554803 ACEP12821 1306 aa15.19■□□□□ 0.02
SRP54-205ENST00000554803 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
SRP54-205ENST00000554803 HSPA6P17066 643 aa15.17■□□□□ 0.02
SRP54-205ENST00000554803 CDCA7Q9BWT1 371 aaPredicted RBP15.17■□□□□ 0.02
SRP54-205ENST00000554803 SLIT3O75094 1523 aa15.17■□□□□ 0.02
SRP54-205ENST00000554803 TOM1L2Q6ZVM7 507 aa15.16■□□□□ 0.02
SRP54-205ENST00000554803 ATP10DQ9P241 1426 aa15.16■□□□□ 0.02
SRP54-205ENST00000554803 KIAA1210Q9ULL0 1709 aa15.15■□□□□ 0.02
SRP54-205ENST00000554803 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
SRP54-205ENST00000554803 WDR17Q8IZU2 1322 aa15.15■□□□□ 0.02
SRP54-205ENST00000554803 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.018e-7■■■■■ 28.7
SRP54-205ENST00000554803 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
SRP54-205ENST00000554803 CCDC61Q9Y6R9 512 aa15.14■□□□□ 0.01
SRP54-205ENST00000554803 GRIN3BO60391 1043 aa15.13■□□□□ 0.01
SRP54-205ENST00000554803 SLC16A10Q8TF71 515 aa15.13■□□□□ 0.01
SRP54-205ENST00000554803 CDK19Q9BWU1 502 aa15.13■□□□□ 0.01
SRP54-205ENST00000554803 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
SRP54-205ENST00000554803 ZBTB7CA1YPR0 619 aa15.12■□□□□ 0.01
SRP54-205ENST00000554803 POLD1P28340 1107 aa15.12■□□□□ 0.01
SRP54-205ENST00000554803 ZNF827Q17R98 1081 aa15.12■□□□□ 0.01
SRP54-205ENST00000554803 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
SRP54-205ENST00000554803 TNS2Q63HR2 1409 aa15.11■□□□□ 0.01
SRP54-205ENST00000554803 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
SRP54-205ENST00000554803 PIK3C2AO00443 1686 aa15.1■□□□□ 0.01
SRP54-205ENST00000554803 EXOC5O00471 708 aa15.1■□□□□ 0.01
SRP54-205ENST00000554803 YBX3P16989 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
SRP54-205ENST00000554803 ABCC6O95255 1503 aa15.1■□□□□ 0.01
SRP54-205ENST00000554803 CARD10Q9BWT7 1032 aa15.09■□□□□ 0.01
SRP54-205ENST00000554803 GPBP1L1Q9HC44 474 aaPredicted RBP15.09■□□□□ 0.01
SRP54-205ENST00000554803 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
SRP54-205ENST00000554803 ADCY9O60503 1353 aa15.09■□□□□ 0.01
SRP54-205ENST00000554803 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
SRP54-205ENST00000554803 FKBP8Q14318 412 aa15.08■□□□□ 0
SRP54-205ENST00000554803 AKT1S1Q96B36 256 aa15.08■□□□□ 0
SRP54-205ENST00000554803 QRICH2Q9H0J4 1663 aa15.08■□□□□ 0
SRP54-205ENST00000554803 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
SRP54-205ENST00000554803 USP6P35125 1406 aa15.07■□□□□ 0
SRP54-205ENST00000554803 PPIP5K1Q6PFW1 1433 aa15.07■□□□□ 0
SRP54-205ENST00000554803 NLRP6P59044 892 aa15.06■□□□□ 0
SRP54-205ENST00000554803 NBPF1Q3BBV0 1214 aa15.06■□□□□ 0
SRP54-205ENST00000554803 ACSBG1Q96GR2 724 aa15.06■□□□□ 0
SRP54-205ENST00000554803 PNPLA7Q6ZV29 1317 aa15.06■□□□□ 0
SRP54-205ENST00000554803 CCDC7Q96M83 1385 aa15.06■□□□□ 0
SRP54-205ENST00000554803 LY75O60449 1722 aa15.04■□□□□ -0
SRP54-205ENST00000554803 ROCK2O75116 1388 aaKnown RBP15.03■□□□□ -0
SRP54-205ENST00000554803 HSPA5P11021 654 aaKnown RBP15.03■□□□□ -0
SRP54-205ENST00000554803 WASHC2AQ641Q2 1341 aa15.02■□□□□ -0
SRP54-205ENST00000554803 CSB-PGBD3P0DP91 1061 aa15.02■□□□□ -0
SRP54-205ENST00000554803 ARHGEF25Q86VW2 580 aa15.02■□□□□ -0
SRP54-205ENST00000554803 SLC27A3Q5K4L6 730 aa15.01□□□□□ -0.01
SRP54-205ENST00000554803 APLP1P51693 650 aa15□□□□□ -0.01
SRP54-205ENST00000554803 ZNF526Q8TF50 670 aaPredicted RBP15□□□□□ -0.01
SRP54-205ENST00000554803 ANP32EQ9BTT0 268 aa15□□□□□ -0.01
SRP54-205ENST00000554803 WDR90Q96KV7 1748 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms