RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 IDI1Q13907 227 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 GAS2L2Q8NHY3 880 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 PRKAR2BP31323 418 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 ERCC4Q92889 916 aaPredicted RBP10.99□□□□□ -0.65
CCNK-203ENST00000553865 SLC12A5Q9H2X9 1139 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 ANO2Q9NQ90 1003 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
CCNK-203ENST00000553865 BACH2Q9BYV9 841 aa10.98□□□□□ -0.65
CCNK-203ENST00000553865 PDZRN3Q9UPQ7 1066 aa10.98□□□□□ -0.65
CCNK-203ENST00000553865 G3BP1Q13283 466 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCNK-203ENST00000553865 TRIM29Q14134 588 aa10.98□□□□□ -0.65
CCNK-203ENST00000553865 STK11IPQ8N1F8 1099 aa10.98□□□□□ -0.65
CCNK-203ENST00000553865 CCDC47Q96A33 483 aaKnown RBP10.98□□□□□ -0.65
CCNK-203ENST00000553865 VPS53Q5VIR6 699 aa10.98□□□□□ -0.65
CCNK-203ENST00000553865 ABCA9Q8IUA7 1624 aa10.98□□□□□ -0.65
CCNK-203ENST00000553865 GNAI3P08754 354 aa10.97□□□□□ -0.65
CCNK-203ENST00000553865 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
CCNK-203ENST00000553865 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
CCNK-203ENST00000553865 TRPM2O94759 1503 aa10.96□□□□□ -0.65
CCNK-203ENST00000553865 CCDC30Q5VVM6 783 aa10.96□□□□□ -0.65
CCNK-203ENST00000553865 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
CCNK-203ENST00000553865 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
CCNK-203ENST00000553865 RIMS2Q9UQ26 1411 aa10.96□□□□□ -0.65
CCNK-203ENST00000553865 BCAR3O75815 825 aa10.96□□□□□ -0.65
CCNK-203ENST00000553865 TWISTNBQ3B726 338 aaPredicted RBP10.96□□□□□ -0.65
CCNK-203ENST00000553865 UBTFL1P0CB47 393 aaPredicted RBP10.96□□□□□ -0.66
CCNK-203ENST00000553865 HOOK1Q9UJC3 728 aaKnown RBP10.96□□□□□ -0.66
CCNK-203ENST00000553865 HSP90AB3PQ58FF7 597 aa10.96□□□□□ -0.66
CCNK-203ENST00000553865 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.66
CCNK-203ENST00000553865 ADGRF5Q8IZF2 1346 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 ANKRD36BQ8N2N9 1353 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 NOB1Q9ULX3 412 aaKnown RBP10.95□□□□□ -0.66
CCNK-203ENST00000553865 SLFN5Q08AF3 891 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 TRDNQ13061 729 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 UNC13BO14795 1591 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 TET3O43151 1660 aa10.95□□□□□ -0.66
CCNK-203ENST00000553865 CPLX1O14810 134 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 MVPQ14764 893 aaKnown RBP10.94□□□□□ -0.66
CCNK-203ENST00000553865 NLRP6P59044 892 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 IFT57Q9NWB7 429 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 SMC3Q9UQE7 1217 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 PROSER2Q86WR7 435 aaPredicted RBP10.94□□□□□ -0.66
CCNK-203ENST00000553865 TRIM34Q9BYJ4 488 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 LEKR1Q6ZMV7 388 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 RAPGEF4Q8WZA2 1011 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 MYOM2P54296 1465 aa10.94□□□□□ -0.66
CCNK-203ENST00000553865 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
CCNK-203ENST00000553865 CCDC173Q0VFZ6 552 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 ATF7IPQ6VMQ6 1270 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 MCM2P49736 904 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 TSPYL1Q9H0U9 437 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 LRPPRCP42704 1394 aaKnown RBP10.93□□□□□ -0.66
CCNK-203ENST00000553865 MRE11P49959 708 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 RABEP1Q15276 862 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 ZRSR2Q15696 482 aaKnown RBP10.93□□□□□ -0.66
CCNK-203ENST00000553865 CABP1Q9NZU7 370 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 TSR2Q969E8 191 aaKnown RBP10.93□□□□□ -0.66
CCNK-203ENST00000553865 ASXL1Q8IXJ9 1541 aa10.93□□□□□ -0.66
CCNK-203ENST00000553865 NPC1L1Q9UHC9 1359 aa10.92□□□□□ -0.66
CCNK-203ENST00000553865 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
CCNK-203ENST00000553865 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
CCNK-203ENST00000553865 FCHSD2O94868 740 aa10.92□□□□□ -0.66
CCNK-203ENST00000553865 FOXD4L6Q3SYB3 417 aaPredicted RBP10.92□□□□□ -0.66
CCNK-203ENST00000553865 FOXD4L3Q6VB84 417 aaPredicted RBP10.92□□□□□ -0.66
CCNK-203ENST00000553865 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
CCNK-203ENST00000553865 TCEAL9Q9UHQ7 104 aa10.92□□□□□ -0.66
CCNK-203ENST00000553865 R3HCC1Q9Y3T6 440 aaKnown RBP10.92□□□□□ -0.66
CCNK-203ENST00000553865 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
CCNK-203ENST00000553865 NUDT16Q96DE0 195 aaKnown RBP10.91□□□□□ -0.66
CCNK-203ENST00000553865 CCDC39Q9UFE4 941 aa10.91□□□□□ -0.66
CCNK-203ENST00000553865 INSRP06213 1382 aa10.91□□□□□ -0.66
CCNK-203ENST00000553865 CCT4P50991 539 aaKnown RBP10.91□□□□□ -0.66
CCNK-203ENST00000553865 NAP1L1P55209 391 aaKnown RBP10.91□□□□□ -0.66
CCNK-203ENST00000553865 RIC3Q7Z5B4 369 aa10.91□□□□□ -0.66
CCNK-203ENST00000553865 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.91□□□□□ -0.66
CCNK-203ENST00000553865 CTDP1Q9Y5B0 961 aaPredicted RBP10.91□□□□□ -0.66
CCNK-203ENST00000553865 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
CCNK-203ENST00000553865 ERICH2A1L162 156 aa10.91□□□□□ -0.66
CCNK-203ENST00000553865 GNAI2P04899 355 aa10.91□□□□□ -0.66
CCNK-203ENST00000553865 ZMYM3Q14202 1370 aa10.91□□□□□ -0.66
CCNK-203ENST00000553865 PTPRTO14522 1441 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 HMGB2P26583 209 aaKnown RBP10.9□□□□□ -0.66
CCNK-203ENST00000553865 PSMA5P28066 241 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 SASS6Q6UVJ0 657 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 KRI1Q8N9T8 703 aaKnown RBP10.9□□□□□ -0.66
CCNK-203ENST00000553865 GOLGA6L7A0A1B0GV03 622 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 USP8P40818 1118 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 PLEKHO1Q53GL0 409 aaPredicted RBP10.9□□□□□ -0.66
CCNK-203ENST00000553865 ARHGAP31Q2M1Z3 1444 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 CLASRPQ8N2M8 674 aaKnown RBP10.9□□□□□ -0.66
CCNK-203ENST00000553865 SIRT1Q96EB6 747 aa10.9□□□□□ -0.66
CCNK-203ENST00000553865 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 HIP1O00291 1037 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms