RNA–Protein interactions for RNA: ENST00000553614.5

HNRNPC-207, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-207ENST00000553614 CENPJQ9HC77 1338 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-207ENST00000553614 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 CHD4Q14839 1912 aa13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 PLSCR1O15162 318 aa13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 USP6P35125 1406 aa13.1□□□□□ -0.31
HNRNPC-207ENST00000553614 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-207ENST00000553614 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
HNRNPC-207ENST00000553614 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-207ENST00000553614 GOLGB1Q14789 3259 aaKnown RBP13.08□□□□□ -0.31
HNRNPC-207ENST00000553614 SLIT3O75094 1523 aa13.08□□□□□ -0.31
HNRNPC-207ENST00000553614 PDGFDQ9GZP0 370 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-207ENST00000553614 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
HNRNPC-207ENST00000553614 PROM2Q8N271 834 aa13.07□□□□□ -0.32
HNRNPC-207ENST00000553614 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-207ENST00000553614 WDR17Q8IZU2 1322 aa13.07□□□□□ -0.32
HNRNPC-207ENST00000553614 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
HNRNPC-207ENST00000553614 SOX12O15370 315 aa13.05□□□□□ -0.32
HNRNPC-207ENST00000553614 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-207ENST00000553614 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-207ENST00000553614 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
HNRNPC-207ENST00000553614 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
HNRNPC-207ENST00000553614 BCL9O00512 1426 aa13.04□□□□□ -0.32
HNRNPC-207ENST00000553614 LTN1O94822 1766 aa13.03□□□□□ -0.32
HNRNPC-207ENST00000553614 PTGER2P43116 358 aa13.03□□□□□ -0.32
HNRNPC-207ENST00000553614 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-207ENST00000553614 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
HNRNPC-207ENST00000553614 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
HNRNPC-207ENST00000553614 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
HNRNPC-207ENST00000553614 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.33
HNRNPC-207ENST00000553614 STK32BQ9NY57 414 aa13.02□□□□□ -0.33
HNRNPC-207ENST00000553614 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
HNRNPC-207ENST00000553614 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
HNRNPC-207ENST00000553614 BTAF1O14981 1849 aa13.02□□□□□ -0.33
HNRNPC-207ENST00000553614 EXOC5O00471 708 aa13.01□□□□□ -0.33
HNRNPC-207ENST00000553614 SLC15A2Q16348 729 aa13□□□□□ -0.33
HNRNPC-207ENST00000553614 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
HNRNPC-207ENST00000553614 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
HNRNPC-207ENST00000553614 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
HNRNPC-207ENST00000553614 TRPM1Q7Z4N2 1603 aa12.99□□□□□ -0.33
HNRNPC-207ENST00000553614 CEP350Q5VT06 3117 aa12.99□□□□□ -0.33
HNRNPC-207ENST00000553614 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
HNRNPC-207ENST00000553614 FHDC1Q9C0D6 1143 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-207ENST00000553614 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
HNRNPC-207ENST00000553614 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
HNRNPC-207ENST00000553614 ZNF784Q8NCA9 323 aaPredicted RBP12.98□□□□□ -0.33
HNRNPC-207ENST00000553614 SYT17Q9BSW7 474 aa12.98□□□□□ -0.33
HNRNPC-207ENST00000553614 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
HNRNPC-207ENST00000553614 RGPD2P0DJD1 1756 aa12.98□□□□□ -0.33
HNRNPC-207ENST00000553614 NFAT5O94916 1531 aa12.98□□□□□ -0.33
HNRNPC-207ENST00000553614 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
HNRNPC-207ENST00000553614 CCDC7Q96M83 1385 aa12.97□□□□□ -0.33
HNRNPC-207ENST00000553614 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
HNRNPC-207ENST00000553614 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
HNRNPC-207ENST00000553614 USP54Q70EL1 1684 aa12.96□□□□□ -0.34
HNRNPC-207ENST00000553614 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-207ENST00000553614 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
HNRNPC-207ENST00000553614 COL24A1Q17RW2 1714 aa12.95□□□□□ -0.34
HNRNPC-207ENST00000553614 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-207ENST00000553614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
HNRNPC-207ENST00000553614 QSER1Q2KHR3 1735 aa12.93□□□□□ -0.34
HNRNPC-207ENST00000553614 ABCC6O95255 1503 aa12.93□□□□□ -0.34
HNRNPC-207ENST00000553614 ERBB3P21860 1342 aa12.93□□□□□ -0.34
HNRNPC-207ENST00000553614 ARXQ96QS3 562 aa12.93□□□□□ -0.34
HNRNPC-207ENST00000553614 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
HNRNPC-207ENST00000553614 IL2RBP14784 551 aa12.92□□□□□ -0.34
HNRNPC-207ENST00000553614 NME9Q86XW9 330 aa12.92□□□□□ -0.34
HNRNPC-207ENST00000553614 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
HNRNPC-207ENST00000553614 ZNF827Q17R98 1081 aa12.91□□□□□ -0.34
HNRNPC-207ENST00000553614 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
HNRNPC-207ENST00000553614 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
HNRNPC-207ENST00000553614 ANKRD24Q8TF21 1146 aa12.9□□□□□ -0.34
HNRNPC-207ENST00000553614 LRRC4BQ9NT99 713 aa12.9□□□□□ -0.34
HNRNPC-207ENST00000553614 SBNO2Q9Y2G9 1366 aa12.9□□□□□ -0.34
HNRNPC-207ENST00000553614 DOT1LQ8TEK3 1739 aa12.89□□□□□ -0.35
HNRNPC-207ENST00000553614 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
HNRNPC-207ENST00000553614 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
HNRNPC-207ENST00000553614 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
HNRNPC-207ENST00000553614 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
HNRNPC-207ENST00000553614 LY75O60449 1722 aa12.88□□□□□ -0.35
HNRNPC-207ENST00000553614 SENP3-EIF4A1A0A087X0R7 540 aa12.88□□□□□ -0.35
HNRNPC-207ENST00000553614 C1QTNF8P60827 252 aa12.87□□□□□ -0.35
HNRNPC-207ENST00000553614 GPR162Q16538 588 aa12.87□□□□□ -0.35
HNRNPC-207ENST00000553614 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
HNRNPC-207ENST00000553614 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
HNRNPC-207ENST00000553614 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
HNRNPC-207ENST00000553614 HDGFL2Q7Z4V5 671 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-207ENST00000553614 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-207ENST00000553614 KCNQ4P56696 695 aa12.85□□□□□ -0.35
HNRNPC-207ENST00000553614 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
HNRNPC-207ENST00000553614 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-207ENST00000553614 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-207ENST00000553614 PNPLA7Q6ZV29 1317 aa12.85□□□□□ -0.35
HNRNPC-207ENST00000553614 TAF1LQ8IZX4 1826 aa12.84□□□□□ -0.35
HNRNPC-207ENST00000553614 POLD1P28340 1107 aa12.84□□□□□ -0.35
HNRNPC-207ENST00000553614 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-207ENST00000553614 SLC16A10Q8TF71 515 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms