RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 IQGAP1P46940 1657 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 KIAA1468Q9P260 1216 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 RABGEF1Q9UJ41 708 aa5.39□□□□□ -1.55
RDH11-204ENST00000553578 HECW2Q9P2P5 1572 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 GNPATO15228 680 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 AGLP35573 1532 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 SLC4A3P48751 1232 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 PTGDRQ13258 359 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 KDM4CQ9H3R0 1056 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 C1orf115Q9H7X2 142 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 BCCIPQ9P287 314 aaKnown RBP eCLIP5.38□□□□□ -1.55
RDH11-204ENST00000553578 ABCA6Q8N139 1617 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 DIP2BQ9P265 1576 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 ATP7AQ04656 1500 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 ONECUT3O60422 494 aaPredicted RBP5.38□□□□□ -1.55
RDH11-204ENST00000553578 PADI6Q6TGC4 694 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 PNMA3Q9UL41 463 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 ANKRD30AQ9BXX3 1397 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 RALGAPBQ86X10 1494 aa5.38□□□□□ -1.55
RDH11-204ENST00000553578 RBM27Q9P2N5 1060 aaKnown RBP5.37□□□□□ -1.55
RDH11-204ENST00000553578 GPRASP1Q5JY77 1395 aa5.37□□□□□ -1.55
RDH11-204ENST00000553578 RIMBP3CA6NJZ7 1639 aa5.37□□□□□ -1.55
RDH11-204ENST00000553578 RIMBP3BA6NNM3 1639 aa5.37□□□□□ -1.55
RDH11-204ENST00000553578 RIMBP3Q9UFD9 1639 aa5.37□□□□□ -1.55
RDH11-204ENST00000553578 PLA2R1Q13018 1463 aa5.37□□□□□ -1.55
RDH11-204ENST00000553578 CDCA8Q53HL2 280 aa5.37□□□□□ -1.55
RDH11-204ENST00000553578 RBM46Q8TBY0 533 aaKnown RBP5.37□□□□□ -1.55
RDH11-204ENST00000553578 EFCAB6Q5THR3 1501 aa5.37□□□□□ -1.55
RDH11-204ENST00000553578 KIF13AQ9H1H9 1805 aa5.36□□□□□ -1.55
RDH11-204ENST00000553578 HSP90AA2PQ14568 343 aaPredicted RBP5.36□□□□□ -1.55
RDH11-204ENST00000553578 SETBP1Q9Y6X0 1596 aa5.36□□□□□ -1.55
RDH11-204ENST00000553578 MADDQ8WXG6 1647 aa5.36□□□□□ -1.55
RDH11-204ENST00000553578 ITGAEP38570 1179 aa5.36□□□□□ -1.55
RDH11-204ENST00000553578 TSC1Q92574 1164 aa5.36□□□□□ -1.55
RDH11-204ENST00000553578 SEPT9Q9UHD8 586 aaPredicted RBP5.36□□□□□ -1.55
RDH11-204ENST00000553578 ANKRD50Q9ULJ7 1429 aa5.36□□□□□ -1.55
RDH11-204ENST00000553578 ARHGAP31Q2M1Z3 1444 aa5.36□□□□□ -1.55
RDH11-204ENST00000553578 PLSCR2Q9NRY7 297 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 FANCAO15360 1455 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 MYOM2P54296 1465 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 CSPP1Q1MSJ5 1256 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 ANKK1Q8NFD2 765 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 TATDN2Q93075 761 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 ARHGAP5Q13017 1502 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 PPP1R15AO75807 674 aaPredicted RBP5.35□□□□□ -1.55
RDH11-204ENST00000553578 OATP04181 439 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 NUDT18Q6ZVK8 323 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 NPDC1Q9NQX5 325 aaPredicted RBP5.35□□□□□ -1.55
RDH11-204ENST00000553578 TSKSQ9UJT2 592 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 SYNMO15061 1565 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 MROH2AA6NES4 1674 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 POGZQ7Z3K3 1410 aa5.35□□□□□ -1.55
RDH11-204ENST00000553578 DIP2CQ9Y2E4 1556 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 LAPTM4BQ86VI4 370 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 RETREG2Q8NC44 543 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 UGGT1Q9NYU2 1555 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 SMAPO00193 183 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 FAM98CQ17RN3 349 aaKnown RBP5.34□□□□□ -1.55
RDH11-204ENST00000553578 PPLO60437 1756 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 ASXL2Q76L83 1435 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 SCAPERQ9BY12 1400 aa5.34□□□□□ -1.55
RDH11-204ENST00000553578 CALR3Q96L12 384 aaKnown RBP5.34□□□□□ -1.55
RDH11-204ENST00000553578 ADGRB3O60242 1522 aa5.34□□□□□ -1.56
RDH11-204ENST00000553578 RNF40O75150 1001 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 CANXP27824 592 aaKnown RBP5.33□□□□□ -1.56
RDH11-204ENST00000553578 SPNS2Q8IVW8 549 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 WNT2BQ93097 391 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 KCTD12Q96CX2 325 aaKnown RBP5.33□□□□□ -1.56
RDH11-204ENST00000553578 FANCIQ9NVI1 1328 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 INSRP06213 1382 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 CAMSAP1Q5T5Y3 1602 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 POLR3EQ9NVU0 708 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 CARNS1A5YM72 827 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 FAM117AQ9C073 453 aa5.33□□□□□ -1.56
RDH11-204ENST00000553578 RNF166Q96A37 237 aaPredicted RBP5.32□□□□□ -1.56
RDH11-204ENST00000553578 CWC22Q9HCG8 908 aaKnown RBP5.32□□□□□ -1.56
RDH11-204ENST00000553578 CLTCL1P53675 1640 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 PLEKHD1A6NEE1 506 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 CNGB1Q14028 1251 aaPredicted RBP5.32□□□□□ -1.56
RDH11-204ENST00000553578 CCDC27Q2M243 656 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 USP32Q8NFA0 1604 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 LRCH3Q96II8 777 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 SETD1AO15047 1707 aaKnown RBP5.32□□□□□ -1.56
RDH11-204ENST00000553578 SIGLEC1Q9BZZ2 1709 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 MINK1Q8N4C8 1332 aaPredicted RBP5.32□□□□□ -1.56
RDH11-204ENST00000553578 HRO43593 1189 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 ABL2P42684 1182 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 MAP2K5Q13163 448 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 ZFRQ96KR1 1074 aaKnown RBP5.32□□□□□ -1.56
RDH11-204ENST00000553578 AK7Q96M32 723 aa5.32□□□□□ -1.56
RDH11-204ENST00000553578 NOP58Q9Y2X3 529 aaKnown RBP5.32□□□□□ -1.56
RDH11-204ENST00000553578 PCMTD1Q96MG8 357 aaPredicted RBP5.31□□□□□ -1.56
RDH11-204ENST00000553578 ZNF330Q9Y3S2 320 aaPredicted RBP5.31□□□□□ -1.56
RDH11-204ENST00000553578 KIF1BO60333 1816 aa5.31□□□□□ -1.56
RDH11-204ENST00000553578 NEFMP07197 916 aa5.31□□□□□ -1.56
RDH11-204ENST00000553578 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.31□□□□□ -1.56
RDH11-204ENST00000553578 PRAG1Q86YV5 1406 aa5.31□□□□□ -1.56
RDH11-204ENST00000553578 TRAPPC8Q9Y2L5 1435 aa5.31□□□□□ -1.56
RDH11-204ENST00000553578 DNAJB2P25686 324 aa5.31□□□□□ -1.56
RDH11-204ENST00000553578 FAM161AQ3B820 660 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms