RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CCDC61Q9Y6R9 512 aa15.51■□□□□ 0.07
HDAC7-230ENST00000552960 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.51■□□□□ 0.07
HDAC7-230ENST00000552960 ZMYND15Q9H091 742 aa15.51■□□□□ 0.07
HDAC7-230ENST00000552960 TRIM44Q96DX7 344 aaPredicted RBP15.51■□□□□ 0.07
HDAC7-230ENST00000552960 MED14O60244 1454 aa15.5■□□□□ 0.07
HDAC7-230ENST00000552960 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
HDAC7-230ENST00000552960 ARHGAP23Q9P227 1491 aa15.5■□□□□ 0.07
HDAC7-230ENST00000552960 TECPR2O15040 1411 aa15.5■□□□□ 0.07
HDAC7-230ENST00000552960 RRS1Q15050 365 aaKnown RBP15.5■□□□□ 0.07
HDAC7-230ENST00000552960 TRIM27P14373 513 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 FAM135BQ49AJ0 1406 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 GRPEL1Q9HAV7 217 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 SHPRHQ149N8 1683 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 SLIT1O75093 1534 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 MRE11P49959 708 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 CPS1P31327 1500 aa15.49■□□□□ 0.07
HDAC7-230ENST00000552960 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
HDAC7-230ENST00000552960 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
HDAC7-230ENST00000552960 TBX22Q9Y458 520 aa15.48■□□□□ 0.07
HDAC7-230ENST00000552960 ATP7BP35670 1465 aa15.47■□□□□ 0.07
HDAC7-230ENST00000552960 AAMPQ13685 434 aa15.47■□□□□ 0.07
HDAC7-230ENST00000552960 POLKQ9UBT6 870 aa15.47■□□□□ 0.07
HDAC7-230ENST00000552960 ACEP12821 1306 aa15.47■□□□□ 0.07
HDAC7-230ENST00000552960 USP32Q8NFA0 1604 aa15.47■□□□□ 0.07
HDAC7-230ENST00000552960 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
HDAC7-230ENST00000552960 CPSF1Q10570 1443 aaKnown RBP15.47■□□□□ 0.07
HDAC7-230ENST00000552960 DDX11L8A8MPP1 907 aa15.46■□□□□ 0.07
HDAC7-230ENST00000552960 CEP170BQ9Y4F5 1589 aaPredicted RBP15.46■□□□□ 0.07
HDAC7-230ENST00000552960 NSD2O96028 1365 aa15.46■□□□□ 0.06
HDAC7-230ENST00000552960 CLCN1P35523 988 aa15.45■□□□□ 0.06
HDAC7-230ENST00000552960 SIRT1Q96EB6 747 aa15.45■□□□□ 0.06
HDAC7-230ENST00000552960 DDX19BQ9UMR2 479 aa15.45■□□□□ 0.06
HDAC7-230ENST00000552960 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
HDAC7-230ENST00000552960 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
HDAC7-230ENST00000552960 TNPO1Q92973 898 aaKnown RBP15.45■□□□□ 0.06
HDAC7-230ENST00000552960 ESPNB1AK53 854 aa15.44■□□□□ 0.06
HDAC7-230ENST00000552960 C1orf115Q9H7X2 142 aa15.44■□□□□ 0.06
HDAC7-230ENST00000552960 HMOX1P09601 288 aa15.43■□□□□ 0.06
HDAC7-230ENST00000552960 NUTM2GQ5VZR2 741 aa15.43■□□□□ 0.06
HDAC7-230ENST00000552960 ANKRD45Q5TZF3 282 aa15.43■□□□□ 0.06
HDAC7-230ENST00000552960 ANKLE2Q86XL3 938 aa15.43■□□□□ 0.06
HDAC7-230ENST00000552960 KNDC1Q76NI1 1749 aa15.42■□□□□ 0.06
HDAC7-230ENST00000552960 GAS2L3Q86XJ1 694 aa15.42■□□□□ 0.06
HDAC7-230ENST00000552960 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
HDAC7-230ENST00000552960 RIPK4P57078 832 aa15.41■□□□□ 0.06
HDAC7-230ENST00000552960 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
HDAC7-230ENST00000552960 NCLP19338 710 aaKnown RBP15.41■□□□□ 0.06
HDAC7-230ENST00000552960 GBP4Q96PP9 640 aa15.41■□□□□ 0.06
HDAC7-230ENST00000552960 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
HDAC7-230ENST00000552960 COL3A1P02461 1466 aaPredicted RBP15.41■□□□□ 0.06
HDAC7-230ENST00000552960 ERBB4Q15303 1308 aa15.4■□□□□ 0.06
HDAC7-230ENST00000552960 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
HDAC7-230ENST00000552960 TMPOP42166 694 aaKnown RBP15.4■□□□□ 0.06
HDAC7-230ENST00000552960 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
HDAC7-230ENST00000552960 ADAMTSL3P82987 1691 aa15.4■□□□□ 0.06
HDAC7-230ENST00000552960 EDC4Q6P2E9 1401 aaKnown RBP15.4■□□□□ 0.06
HDAC7-230ENST00000552960 COG3Q96JB2 828 aa15.4■□□□□ 0.06
HDAC7-230ENST00000552960 TTC21BQ7Z4L5 1316 aa15.4■□□□□ 0.06
HDAC7-230ENST00000552960 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
HDAC7-230ENST00000552960 CCDC27Q2M243 656 aa15.39■□□□□ 0.05
HDAC7-230ENST00000552960 CDC42BPGQ6DT37 1551 aa15.38■□□□□ 0.05
HDAC7-230ENST00000552960 NGDNQ8NEJ9 315 aaKnown RBP15.38■□□□□ 0.05
HDAC7-230ENST00000552960 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
HDAC7-230ENST00000552960 SMC5Q8IY18 1101 aa15.38■□□□□ 0.05
HDAC7-230ENST00000552960 CD2BP2O95400 341 aaKnown RBP15.38■□□□□ 0.05
HDAC7-230ENST00000552960 CHD1LQ86WJ1 897 aa15.38■□□□□ 0.05
HDAC7-230ENST00000552960 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
HDAC7-230ENST00000552960 HSPA2P54652 639 aa15.37■□□□□ 0.05
HDAC7-230ENST00000552960 KIF20BQ96Q89 1820 aa15.37■□□□□ 0.05
HDAC7-230ENST00000552960 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
HDAC7-230ENST00000552960 RGPD8O14715 1765 aaPredicted RBP15.37■□□□□ 0.05
HDAC7-230ENST00000552960 IQSEC2Q5JU85 1478 aa15.36■□□□□ 0.05
HDAC7-230ENST00000552960 PLEKHG3A1L390 1219 aa15.36■□□□□ 0.05
HDAC7-230ENST00000552960 ZBTB40Q9NUA8 1239 aa15.36■□□□□ 0.05
HDAC7-230ENST00000552960 SSFA2P28290 1259 aa15.36■□□□□ 0.05
HDAC7-230ENST00000552960 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
HDAC7-230ENST00000552960 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
HDAC7-230ENST00000552960 DDX49Q9Y6V7 483 aaKnown RBP15.36■□□□□ 0.05
HDAC7-230ENST00000552960 PNPLA6Q8IY17 1366 aa15.36■□□□□ 0.05
HDAC7-230ENST00000552960 ANP32BQ92688 251 aaKnown RBP15.36■□□□□ 0.05
HDAC7-230ENST00000552960 THUMPD2Q9BTF0 503 aaKnown RBP15.36■□□□□ 0.05
HDAC7-230ENST00000552960 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 XPCQ01831 940 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-230ENST00000552960 NUCB1Q02818 461 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 ARID3AQ99856 593 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 DIP2AQ14689 1571 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 USP6P35125 1406 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 MAP2P11137 1827 aaKnown RBP15.34■□□□□ 0.05
HDAC7-230ENST00000552960 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 AEBP1Q8IUX7 1158 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 IL13P35225 146 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 ANKRD26Q9UPS8 1709 aa15.34■□□□□ 0.05
HDAC7-230ENST00000552960 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
HDAC7-230ENST00000552960 APBB1O00213 710 aa15.33■□□□□ 0.04
HDAC7-230ENST00000552960 RBM25P49756 843 aaKnown RBP15.33■□□□□ 0.04
HDAC7-230ENST00000552960 ADGRB2O60241 1585 aa15.32■□□□□ 0.04
HDAC7-230ENST00000552960 NASPP49321 788 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms